Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_C10.2
(1279 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein. 210 8e-54
BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein comple... 210 8e-54
BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein comple... 210 8e-54
BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein comple... 210 8e-54
AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein pro... 210 8e-54
AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of coat... 210 1e-53
AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein. 210 1e-53
AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein. 209 1e-53
AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein. 188 5e-47
AC002985-1|AAB81543.1| 147|Homo sapiens epsilon-COP protein. 92 5e-18
EF567077-1|ABQ63084.1| 1328|Homo sapiens Fanconi anemia compleme... 31 6.8
EF469766-1|ABP88002.1| 1328|Homo sapiens Fanconi anemia compleme... 31 6.8
AK027564-1|BAB55200.1| 906|Homo sapiens protein ( Homo sapiens ... 31 6.8
AK001581-1|BAA91770.1| 1084|Homo sapiens protein ( Homo sapiens ... 31 6.8
>CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein.
Length = 308
Score = 210 bits (513), Expect = 8e-54
Identities = 107/285 (37%), Positives = 165/285 (57%), Gaps = 1/285 (0%)
Frame = +1
Query: 94 KMHFMLEIISKLLMRHKALALLHPWXALQRDAFLYRSYIAQGNYRIVQQELKTAD-PMLQ 270
K F + + + + + L P ++RD FLYR+Y+AQ + +V E+K + P LQ
Sbjct: 23 KNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQ 82
Query: 271 PLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 450
++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142
Query: 451 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAH 630
+SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+
Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAY 202
Query: 631 YSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTDAASRAPQXXXXXXXXXXXXX 810
Y E+++ WE AE L +A +
Sbjct: 203 YIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQ 261
Query: 811 XXXKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYXP 945
KPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY P
Sbjct: 262 HLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAP 306
Score = 48.8 bits (111), Expect = 4e-05
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +3
Query: 72 VDXLFDVKNAFYVGNYQQAINEAQSV 149
VD LFDVKNAFY+G+YQQ INEAQ V
Sbjct: 16 VDELFDVKNAFYIGSYQQCINEAQRV 41
>BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 210 bits (513), Expect = 8e-54
Identities = 107/285 (37%), Positives = 165/285 (57%), Gaps = 1/285 (0%)
Frame = +1
Query: 94 KMHFMLEIISKLLMRHKALALLHPWXALQRDAFLYRSYIAQGNYRIVQQELKTAD-PMLQ 270
K F + + + + + L P ++RD FLYR+Y+AQ + +V E+K + P LQ
Sbjct: 23 KNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQ 82
Query: 271 PLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 450
++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142
Query: 451 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAH 630
+SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+
Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAY 202
Query: 631 YSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTDAASRAPQXXXXXXXXXXXXX 810
Y E+++ WE AE L +A +
Sbjct: 203 YIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQ 261
Query: 811 XXXKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYXP 945
KPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY P
Sbjct: 262 HLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAP 306
Score = 48.8 bits (111), Expect = 4e-05
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +3
Query: 72 VDXLFDVKNAFYVGNYQQAINEAQSV 149
VD LFDVKNAFY+G+YQQ INEAQ V
Sbjct: 16 VDELFDVKNAFYIGSYQQCINEAQRV 41
>BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 210 bits (513), Expect = 8e-54
Identities = 107/285 (37%), Positives = 165/285 (57%), Gaps = 1/285 (0%)
Frame = +1
Query: 94 KMHFMLEIISKLLMRHKALALLHPWXALQRDAFLYRSYIAQGNYRIVQQELKTAD-PMLQ 270
K F + + + + + L P ++RD FLYR+Y+AQ + +V E+K + P LQ
Sbjct: 23 KNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQ 82
Query: 271 PLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 450
++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142
Query: 451 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAH 630
+SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+
Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAY 202
Query: 631 YSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTDAASRAPQXXXXXXXXXXXXX 810
Y E+++ WE AE L +A +
Sbjct: 203 YIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQ 261
Query: 811 XXXKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYXP 945
KPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY P
Sbjct: 262 HLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAP 306
Score = 48.8 bits (111), Expect = 4e-05
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +3
Query: 72 VDXLFDVKNAFYVGNYQQAINEAQSV 149
VD LFDVKNAFY+G+YQQ INEAQ V
Sbjct: 16 VDELFDVKNAFYIGSYQQCINEAQRV 41
>BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 210 bits (513), Expect = 8e-54
Identities = 107/285 (37%), Positives = 165/285 (57%), Gaps = 1/285 (0%)
Frame = +1
Query: 94 KMHFMLEIISKLLMRHKALALLHPWXALQRDAFLYRSYIAQGNYRIVQQELKTAD-PMLQ 270
K F + + + + + L P ++RD FLYR+Y+AQ + +V E+K + P LQ
Sbjct: 23 KNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQ 82
Query: 271 PLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 450
++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142
Query: 451 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAH 630
+SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+
Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAY 202
Query: 631 YSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTDAASRAPQXXXXXXXXXXXXX 810
Y E+++ WE AE L +A +
Sbjct: 203 YIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQ 261
Query: 811 XXXKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYXP 945
KPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY P
Sbjct: 262 HLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAP 306
Score = 48.8 bits (111), Expect = 4e-05
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +3
Query: 72 VDXLFDVKNAFYVGNYQQAINEAQSV 149
VD LFDVKNAFY+G+YQQ INEAQ V
Sbjct: 16 VDELFDVKNAFYIGSYQQCINEAQRV 41
>AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein
protein.
Length = 308
Score = 210 bits (513), Expect = 8e-54
Identities = 107/285 (37%), Positives = 165/285 (57%), Gaps = 1/285 (0%)
Frame = +1
Query: 94 KMHFMLEIISKLLMRHKALALLHPWXALQRDAFLYRSYIAQGNYRIVQQELKTAD-PMLQ 270
K F + + + + + L P ++RD FLYR+Y+AQ + +V E+K + P LQ
Sbjct: 23 KNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQ 82
Query: 271 PLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 450
++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142
Query: 451 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAH 630
+SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+
Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAY 202
Query: 631 YSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTDAASRAPQXXXXXXXXXXXXX 810
Y E+++ WE AE L +A +
Sbjct: 203 YIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQ 261
Query: 811 XXXKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYXP 945
KPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY P
Sbjct: 262 HLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAP 306
Score = 48.8 bits (111), Expect = 4e-05
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +3
Query: 72 VDXLFDVKNAFYVGNYQQAINEAQSV 149
VD LFDVKNAFY+G+YQQ INEAQ V
Sbjct: 16 VDELFDVKNAFYIGSYQQCINEAQRV 41
>AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of
coatomer protein complex isoform a variant protein.
Length = 308
Score = 210 bits (512), Expect = 1e-53
Identities = 107/285 (37%), Positives = 165/285 (57%), Gaps = 1/285 (0%)
Frame = +1
Query: 94 KMHFMLEIISKLLMRHKALALLHPWXALQRDAFLYRSYIAQGNYRIVQQELKTAD-PMLQ 270
K F + + + + + L P ++RD FLYR+Y+AQ + +V E+K + P LQ
Sbjct: 23 KNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQ 82
Query: 271 PLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 450
++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142
Query: 451 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAH 630
+SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+
Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAY 202
Query: 631 YSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTDAASRAPQXXXXXXXXXXXXX 810
Y E+++ WE AE L +A +
Sbjct: 203 YIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSCYPETLVNLIVLSQ 261
Query: 811 XXXKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYXP 945
KPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY P
Sbjct: 262 HLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAP 306
Score = 48.8 bits (111), Expect = 4e-05
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +3
Query: 72 VDXLFDVKNAFYVGNYQQAINEAQSV 149
VD LFDVKNAFY+G+YQQ INEAQ V
Sbjct: 16 VDELFDVKNAFYIGSYQQCINEAQRV 41
>AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein.
Length = 307
Score = 210 bits (512), Expect = 1e-53
Identities = 105/265 (39%), Positives = 158/265 (59%), Gaps = 1/265 (0%)
Frame = +1
Query: 154 LLHPWXALQRDAFLYRSYIAQGNYRIVQQELKTAD-PMLQPLKSLVDYLLPDANKSAIVA 330
L P ++RD FLYR+Y+AQ + +V E+K + P LQ ++ DYL ++ + +IVA
Sbjct: 42 LSSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVA 101
Query: 331 DIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRP 510
++D +++ +++N FL++AA+IY H+ N +AAL+ LH +SLE A T+Q LL ++R
Sbjct: 102 ELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLECTAMTVQILLKLDRL 161
Query: 511 DLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXX 690
DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y E+++
Sbjct: 162 DLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNG 220
Query: 691 XXXXXXXXXMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXXKPPEVSARYLAQLLDSH 870
WE AE L +A + KPPEV+ RYL+QL D+H
Sbjct: 221 QAACHIAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPPEVTNRYLSQLKDAH 280
Query: 871 PQHPFVKEYKAKTDEFQRLAAQYXP 945
HPF+KEY+AK ++F RL QY P
Sbjct: 281 RSHPFIKEYQAKENDFDRLVLQYAP 305
Score = 48.0 bits (109), Expect = 7e-05
Identities = 22/37 (59%), Positives = 24/37 (64%)
Frame = +3
Query: 39 PVVPXARHQQAVDXLFDVKNAFYVGNYQQAINEAQSV 149
P R VD LFDVKNAFY+G+YQQ INEA V
Sbjct: 4 PAPAGLRGSGEVDELFDVKNAFYIGSYQQCINEAHGV 40
>AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein.
Length = 308
Score = 209 bits (511), Expect = 1e-53
Identities = 107/285 (37%), Positives = 165/285 (57%), Gaps = 1/285 (0%)
Frame = +1
Query: 94 KMHFMLEIISKLLMRHKALALLHPWXALQRDAFLYRSYIAQGNYRIVQQELKTAD-PMLQ 270
K F + + + + + L P ++RD FLYR+Y+AQ + +V E+K + P LQ
Sbjct: 23 KNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQ 82
Query: 271 PLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 450
++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNITFLLMAASIYLHDQNPDAALRALHQ 142
Query: 451 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAH 630
+SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+
Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAY 202
Query: 631 YSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTDAASRAPQXXXXXXXXXXXXX 810
Y E+++ WE AE L +A +
Sbjct: 203 YIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQ 261
Query: 811 XXXKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYXP 945
KPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY P
Sbjct: 262 HLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAP 306
Score = 48.8 bits (111), Expect = 4e-05
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +3
Query: 72 VDXLFDVKNAFYVGNYQQAINEAQSV 149
VD LFDVKNAFY+G+YQQ INEAQ V
Sbjct: 16 VDELFDVKNAFYIGSYQQCINEAQRV 41
>AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein.
Length = 245
Score = 188 bits (457), Expect = 5e-47
Identities = 94/242 (38%), Positives = 143/242 (59%), Gaps = 1/242 (0%)
Frame = +1
Query: 223 YRIVQQELKTAD-PMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAAT 399
+ +V E+K + P LQ ++ DYL ++ + +IVA++D +++ +++N FL++AA+
Sbjct: 3 FGVVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAAS 62
Query: 400 IYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLA 579
IY H+ N +AAL+ LH +SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA
Sbjct: 63 IYLHDQNPDAALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLA 122
Query: 580 QAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTDAAS 759
AW++L GG +QDA+Y E+++ WE AE L +A
Sbjct: 123 TAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALD 181
Query: 760 RAPQXXXXXXXXXXXXXXXXKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQY 939
+ KPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY
Sbjct: 182 KDSGYPETLVNLIVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQY 241
Query: 940 XP 945
P
Sbjct: 242 AP 243
>AC002985-1|AAB81543.1| 147|Homo sapiens epsilon-COP protein.
Length = 147
Score = 91.9 bits (218), Expect = 5e-18
Identities = 43/125 (34%), Positives = 77/125 (61%), Gaps = 1/125 (0%)
Frame = +1
Query: 94 KMHFMLEIISKLLMRHKALALLHPWXALQRDAFLYRSYIAQGNYRIVQQELKTAD-PMLQ 270
K F + + + + + L P ++RD FLYR+Y+AQ + +V E+K + P LQ
Sbjct: 23 KNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQ 82
Query: 271 PLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 450
++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142
Query: 451 AESLE 465
+SLE
Sbjct: 143 GDSLE 147
Score = 48.8 bits (111), Expect = 4e-05
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +3
Query: 72 VDXLFDVKNAFYVGNYQQAINEAQSV 149
VD LFDVKNAFY+G+YQQ INEAQ V
Sbjct: 16 VDELFDVKNAFYIGSYQQCINEAQRV 41
>EF567077-1|ABQ63084.1| 1328|Homo sapiens Fanconi anemia
complementation group I protein.
Length = 1328
Score = 31.5 bits (68), Expect = 6.8
Identities = 26/96 (27%), Positives = 49/96 (51%)
Frame = +1
Query: 58 VISKLLMXFSMSKMHFMLEIISKLLMRHKALALLHPWXALQRDAFLYRSYIAQGNYRIVQ 237
V+++++ S HF L+++S ++M A +L + +AF Y S++ + VQ
Sbjct: 444 VLNRVVTRASSPISHF-LDLLSNIVMY--APLVLQSCSSKVTEAFDYLSFLP---LQTVQ 497
Query: 238 QELKTADPMLQPLKSLVDYLLPDANKSAIVADIDAR 345
+ LK P+L+ S+ D L+ K+ +DAR
Sbjct: 498 RLLKAVQPLLKVSMSMRDCLILVLRKAMFANQLDAR 533
>EF469766-1|ABP88002.1| 1328|Homo sapiens Fanconi anemia
complementation group I isoform 3 protein.
Length = 1328
Score = 31.5 bits (68), Expect = 6.8
Identities = 26/96 (27%), Positives = 49/96 (51%)
Frame = +1
Query: 58 VISKLLMXFSMSKMHFMLEIISKLLMRHKALALLHPWXALQRDAFLYRSYIAQGNYRIVQ 237
V+++++ S HF L+++S ++M A +L + +AF Y S++ + VQ
Sbjct: 444 VLNRVVTRASSPISHF-LDLLSNIVMY--APLVLQSCSSKVTEAFDYLSFLP---LQTVQ 497
Query: 238 QELKTADPMLQPLKSLVDYLLPDANKSAIVADIDAR 345
+ LK P+L+ S+ D L+ K+ +DAR
Sbjct: 498 RLLKAVQPLLKVSMSMRDCLILVLRKAMFANQLDAR 533
>AK027564-1|BAB55200.1| 906|Homo sapiens protein ( Homo sapiens
cDNA FLJ14658 fis, clone NT2RP2002549. ).
Length = 906
Score = 31.5 bits (68), Expect = 6.8
Identities = 26/96 (27%), Positives = 49/96 (51%)
Frame = +1
Query: 58 VISKLLMXFSMSKMHFMLEIISKLLMRHKALALLHPWXALQRDAFLYRSYIAQGNYRIVQ 237
V+++++ S HF L+++S ++M A +L + +AF Y S++ + VQ
Sbjct: 82 VLNRVVTRASSPISHF-LDLLSNIVMY--APLVLQSCSSKVTEAFDYLSFLP---LQTVQ 135
Query: 238 QELKTADPMLQPLKSLVDYLLPDANKSAIVADIDAR 345
+ LK P+L+ S+ D L+ K+ +DAR
Sbjct: 136 RLLKAVQPLLKVSMSMRDCLILVLRKAMFANQLDAR 171
>AK001581-1|BAA91770.1| 1084|Homo sapiens protein ( Homo sapiens
cDNA FLJ10719 fis, clone NT2RP3001109. ).
Length = 1084
Score = 31.5 bits (68), Expect = 6.8
Identities = 26/96 (27%), Positives = 49/96 (51%)
Frame = +1
Query: 58 VISKLLMXFSMSKMHFMLEIISKLLMRHKALALLHPWXALQRDAFLYRSYIAQGNYRIVQ 237
V+++++ S HF L+++S ++M A +L + +AF Y S++ + VQ
Sbjct: 265 VLNRVVTRASSPISHF-LDLLSNIVMY--APLVLQSCSSKVTEAFDYLSFLP---LQTVQ 318
Query: 238 QELKTADPMLQPLKSLVDYLLPDANKSAIVADIDAR 345
+ LK P+L+ S+ D L+ K+ +DAR
Sbjct: 319 RLLKAVQPLLKVSMSMRDCLILVLRKAMFANQLDAR 354
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,479,816
Number of Sequences: 237096
Number of extensions: 2692897
Number of successful extensions: 9138
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9119
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18330394590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -