Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_C10.2
         (1279 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145691-1|AAD38666.1|  306|Drosophila melanogaster BcDNA.LD2988...   124   3e-28
AE014134-1103|AAF52392.1|  306|Drosophila melanogaster CG9543-PA...   124   3e-28
L42511-1|AAC41607.1|  224|Drosophila melanogaster shortsighted c...    31   2.6  
AF003342-1|AAB61239.1|  225|Drosophila melanogaster bunched prot...    31   2.6  
AE014134-2215|AAF53200.2|  219|Drosophila melanogaster CG5461-PB...    31   2.6  

>AF145691-1|AAD38666.1|  306|Drosophila melanogaster BcDNA.LD29885
           protein.
          Length = 306

 Score =  124 bits (299), Expect = 3e-28
 Identities = 79/252 (31%), Positives = 122/252 (48%), Gaps = 1/252 (0%)
 Frame = +1

Query: 187 AFLYRSYIAQGNYRIVQQELKTADPM-LQPLKSLVDYLLPDANKSAIVADIDARVAKGTE 363
           +++Y SY+A  + RIV  ++K  +   LQ L+ + +     +    ++  +  +VA G E
Sbjct: 46  SYMYLSYLAIDSGRIVASDIKEGNSTPLQALRLVHEAFEQPSRTEELLEKLTDKVA-GEE 104

Query: 364 LSNEIFLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQ 543
               I+ +  A +Y H+  +E ALKILH + +LE  A ++QCLL + R DLA++ +  +Q
Sbjct: 105 DETNIWHLATAIVYCHDGQFENALKILHGSTNLESMALSVQCLLRLQRVDLAKQLVAKMQ 164

Query: 544 DIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMW 723
           +I DD TLTQLAQAW+ L QG   +QDA +   E  E                      +
Sbjct: 165 EISDDATLTQLAQAWVALAQGTEQMQDAFHIYQEFCE-KFKPTPALLNGQAVVHLGLERY 223

Query: 724 EEAEQQLTDAASRAPQXXXXXXXXXXXXXXXXKPPEVSARYLAQLLDSHPQHPFVKEYKA 903
           EEA+  L ++  +                   KP E   R L QL   +P+  FV +   
Sbjct: 224 EEADSVLRESLLKKHNDYDTLINLMVHAHLTGKPTEAITRNLEQLRQFYPKSDFVTDLDK 283

Query: 904 KTDEFQRLAAQY 939
           K+ EF RL  QY
Sbjct: 284 KSAEFDRLCLQY 295


>AE014134-1103|AAF52392.1|  306|Drosophila melanogaster CG9543-PA
           protein.
          Length = 306

 Score =  124 bits (299), Expect = 3e-28
 Identities = 79/252 (31%), Positives = 122/252 (48%), Gaps = 1/252 (0%)
 Frame = +1

Query: 187 AFLYRSYIAQGNYRIVQQELKTADPM-LQPLKSLVDYLLPDANKSAIVADIDARVAKGTE 363
           +++Y SY+A  + RIV  ++K  +   LQ L+ + +     +    ++  +  +VA G E
Sbjct: 46  SYMYLSYLAIDSGRIVASDIKEGNSTPLQALRLVHEAFEQPSRTEELLEKLTDKVA-GEE 104

Query: 364 LSNEIFLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQ 543
               I+ +  A +Y H+  +E ALKILH + +LE  A ++QCLL + R DLA++ +  +Q
Sbjct: 105 DETNIWHLATAIVYCHDGQFENALKILHGSTNLESMALSVQCLLRLQRVDLAKQLVAKMQ 164

Query: 544 DIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMW 723
           +I DD TLTQLAQAW+ L QG   +QDA +   E  E                      +
Sbjct: 165 EISDDATLTQLAQAWVALAQGTEQMQDAFHIYQEFCE-KFKPTPALLNGQAVVHLGLERY 223

Query: 724 EEAEQQLTDAASRAPQXXXXXXXXXXXXXXXXKPPEVSARYLAQLLDSHPQHPFVKEYKA 903
           EEA+  L ++  +                   KP E   R L QL   +P+  FV +   
Sbjct: 224 EEADSVLRESLLKKHNDYDTLINLMVHAHLTGKPTEAITRNLEQLRQFYPKSDFVTDLDK 283

Query: 904 KTDEFQRLAAQY 939
           K+ EF RL  QY
Sbjct: 284 KSAEFDRLCLQY 295


>L42511-1|AAC41607.1|  224|Drosophila melanogaster shortsighted
           class 1 protein.
          Length = 224

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 27/97 (27%), Positives = 45/97 (46%)
 Frame = +1

Query: 247 KTADPMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYE 426
           K  DP+ + +   +DY LPDA+ ++ VA ID ++ +  +L     +I  A     E   E
Sbjct: 28  KQQDPVREVVMKYIDYFLPDASGTSAVA-IDNKIEQAMDLVKSHLMI--AVREEVEVLKE 84

Query: 427 AALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKL 537
              +++     LEL       +L  N P    +QL+L
Sbjct: 85  RISELMDKINKLELE----NSILKSNIPQETLQQLQL 117


>AF003342-1|AAB61239.1|  225|Drosophila melanogaster bunched
           protein.
          Length = 225

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = +1

Query: 247 KTADPMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLI 387
           K  DP+ + +   +DY LPDA+ ++ VA ID ++ +  +L     +I
Sbjct: 29  KQEDPVCEVVMKYIDYFLPDASGTSAVA-IDNKIEQAMDLVKSHLMI 74


>AE014134-2215|AAF53200.2|  219|Drosophila melanogaster CG5461-PB,
           isoform B protein.
          Length = 219

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 27/97 (27%), Positives = 45/97 (46%)
 Frame = +1

Query: 247 KTADPMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYE 426
           K  DP+ + +   +DY LPDA+ ++ VA ID ++ +  +L     +I  A     E   E
Sbjct: 28  KQQDPVREVVMKYIDYFLPDASGTSAVA-IDNKIEQAMDLVKSHLMI--AVREEVEVLKE 84

Query: 427 AALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKL 537
              +++     LEL       +L  N P    +QL+L
Sbjct: 85  RISELMDKINKLELE----NSILKSNIPQETLQQLQL 117


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,608,577
Number of Sequences: 53049
Number of extensions: 819629
Number of successful extensions: 2288
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2286
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6886109490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)