Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_C09.2
         (1315 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    26   0.72 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    25   0.95 
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    24   2.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   3.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   6.7  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   6.7  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 25.8 bits (54), Expect = 0.72
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -1

Query: 379 LVLQTYFKFFFRQSIKQWVISIR*WIFFKKQICTKRVVI 263
           +V    F   F  +I  W++ I  W+ F KQ+  K V +
Sbjct: 119 IVAHLLFLVIFVLNIWCWIVEIGGWLAFTKQLLIKFVEV 157


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 25.4 bits (53), Expect = 0.95
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 221 FYYQYPICEYFCIFR 177
           FYY Y +C   CIFR
Sbjct: 156 FYYTYFLCVIVCIFR 170


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 327 HCLIDCLKKNLKYVCKTRKCIQM 395
           +C+ID  ++N    C+ +KC+ M
Sbjct: 127 NCIIDKRQRNRCQYCRYQKCLNM 149


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 228 LYKWMILSLLESMT-TLLVHICFLKKIHHRILMTHCLIDCLKKNLKYVCK 374
           LY+W++L  L  M+  +L+  C    +   +    C+++   + +K VCK
Sbjct: 164 LYRWIVLYTLSKMSQVMLIQFCAFVVV---LKQKFCVVN---QYIKQVCK 207


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 408 VSPKEGEDCVPGNQSNKIDDDVKAVN 485
           VSP + +D  P N   K++D    +N
Sbjct: 738 VSPGDYKDFKPNNPDIKVEDGTLTIN 763


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +2

Query: 338 RLSEKKFKICLQNKKM 385
           RLSEK+ KI  QN+++
Sbjct: 155 RLSEKQVKIWFQNRRV 170


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,089
Number of Sequences: 336
Number of extensions: 3645
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 38843658
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)