Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_C09.2
         (1315 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF137904-1|ABO33431.1|  213|Homo sapiens TFIIIC35 protein.             48   1e-04
BC104655-1|AAI04656.1|  121|Homo sapiens GTF3C6 protein protein.       48   1e-04
BC011593-1|AAH11593.1|  213|Homo sapiens chromosome 6 open readi...    48   1e-04
AL357515-5|CAH73393.1|  213|Homo sapiens chromosome 6 open readi...    48   1e-04
AK057977-1|BAB71624.1|  213|Homo sapiens protein ( Homo sapiens ...    48   1e-04

>EF137904-1|ABO33431.1|  213|Homo sapiens TFIIIC35 protein.
          Length = 213

 Score = 47.6 bits (108), Expect = 1e-04
 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
 Frame = +2

Query: 113 DALDDCEEXILVYLEFK---DSVNIEKYRN-IHILGIDSKNPIVQMDDTFFIGKYDNPFG 280
           D  D+ EE  LV +E     DS  + K  N   +LGID++ PI+Q+D   F G+Y++  G
Sbjct: 12  DGEDEEEEEQLVLVELSGIIDSDFLSKCENKCKVLGIDTERPILQVDSCVFAGEYEDTLG 71

Query: 281 TYLFFEED 304
           T + FEE+
Sbjct: 72  TCVIFEEN 79


>BC104655-1|AAI04656.1|  121|Homo sapiens GTF3C6 protein protein.
          Length = 121

 Score = 47.6 bits (108), Expect = 1e-04
 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
 Frame = +2

Query: 113 DALDDCEEXILVYLEFK---DSVNIEKYRN-IHILGIDSKNPIVQMDDTFFIGKYDNPFG 280
           D  D+ EE  LV +E     DS  + K  N   +LGID++ PI+Q+D   F G+Y++  G
Sbjct: 12  DGEDEEEEEQLVLVELSGIIDSDFLSKCENKCKVLGIDTERPILQVDSCVFAGEYEDTLG 71

Query: 281 TYLFFEED 304
           T + FEE+
Sbjct: 72  TCVIFEEN 79


>BC011593-1|AAH11593.1|  213|Homo sapiens chromosome 6 open reading
           frame 51 protein.
          Length = 213

 Score = 47.6 bits (108), Expect = 1e-04
 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
 Frame = +2

Query: 113 DALDDCEEXILVYLEFK---DSVNIEKYRN-IHILGIDSKNPIVQMDDTFFIGKYDNPFG 280
           D  D+ EE  LV +E     DS  + K  N   +LGID++ PI+Q+D   F G+Y++  G
Sbjct: 12  DGEDEEEEEQLVLVELSGIIDSDFLSKCENKCKVLGIDTERPILQVDSCVFAGEYEDTLG 71

Query: 281 TYLFFEED 304
           T + FEE+
Sbjct: 72  TCVIFEEN 79


>AL357515-5|CAH73393.1|  213|Homo sapiens chromosome 6 open reading
           frame 51 protein.
          Length = 213

 Score = 47.6 bits (108), Expect = 1e-04
 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
 Frame = +2

Query: 113 DALDDCEEXILVYLEFK---DSVNIEKYRN-IHILGIDSKNPIVQMDDTFFIGKYDNPFG 280
           D  D+ EE  LV +E     DS  + K  N   +LGID++ PI+Q+D   F G+Y++  G
Sbjct: 12  DGEDEEEEEQLVLVELSGIIDSDFLSKCENKCKVLGIDTERPILQVDSCVFAGEYEDTLG 71

Query: 281 TYLFFEED 304
           T + FEE+
Sbjct: 72  TCVIFEEN 79


>AK057977-1|BAB71624.1|  213|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25248 fis, clone STM03469. ).
          Length = 213

 Score = 47.6 bits (108), Expect = 1e-04
 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
 Frame = +2

Query: 113 DALDDCEEXILVYLEFK---DSVNIEKYRN-IHILGIDSKNPIVQMDDTFFIGKYDNPFG 280
           D  D+ EE  LV +E     DS  + K  N   +LGID++ PI+Q+D   F G+Y++  G
Sbjct: 12  DGEDEEEEEQLVLVELSGIIDSDFLSKCENKCKVLGIDTERPILQVDSCVFAGEYEDTLG 71

Query: 281 TYLFFEED 304
           T + FEE+
Sbjct: 72  TCVIFEEN 79


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,457,716
Number of Sequences: 237096
Number of extensions: 2099707
Number of successful extensions: 5169
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5123
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18990949350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)