Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_C09.2
         (1315 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71258-12|CAJ30220.1|  555|Caenorhabditis elegans Hypothetical p...    31   1.4  
Z71258-10|CAJ30218.1|  439|Caenorhabditis elegans Hypothetical p...    31   1.4  
Z71258-9|CAI46548.1|  437|Caenorhabditis elegans Hypothetical pr...    30   3.2  
Z71258-8|CAD30427.1|  553|Caenorhabditis elegans Hypothetical pr...    30   3.2  
Z71258-7|CAA95782.2|  588|Caenorhabditis elegans Hypothetical pr...    30   3.2  
U51136-1|AAA96057.1|  553|Caenorhabditis elegans CHR3 protein.         30   3.2  
U13075-1|AAA96983.1|  553|Caenorhabditis elegans steroid hormone...    30   3.2  
AF332203-1|AAK17974.1|  588|Caenorhabditis elegans nuclear recep...    30   3.2  
AF332202-1|AAK17973.1|  573|Caenorhabditis elegans nuclear recep...    30   3.2  
U39994-1|AAB37019.1|  326|Caenorhabditis elegans Hypothetical pr...    29   7.3  
Z68218-3|CAA92473.1|  325|Caenorhabditis elegans Hypothetical pr...    29   9.6  
U39994-2|AAB37017.1|  378|Caenorhabditis elegans Hypothetical pr...    29   9.6  

>Z71258-12|CAJ30220.1|  555|Caenorhabditis elegans Hypothetical
           protein C01H6.5f protein.
          Length = 555

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 18/75 (24%), Positives = 36/75 (48%)
 Frame = +3

Query: 327 HCLIDCLKKNLKYVCKTRKCIQMQHAYVSPKEGEDCVPGNQSNKIDDDVKAVNFKTVQEA 506
           +C++D + +N    C+ +KCI++  +  + K G   +   Q  K++D+V+    K +   
Sbjct: 169 NCVVDRVNRNRCQYCRLKKCIELGMSRDAVKFGR--MSKKQREKVEDEVQVRMHKELAAN 226

Query: 507 INTXTTEYRDKTPEP 551
                  Y D +P P
Sbjct: 227 GLGYQAIYGDYSPPP 241


>Z71258-10|CAJ30218.1|  439|Caenorhabditis elegans Hypothetical
           protein C01H6.5d protein.
          Length = 439

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 18/75 (24%), Positives = 36/75 (48%)
 Frame = +3

Query: 327 HCLIDCLKKNLKYVCKTRKCIQMQHAYVSPKEGEDCVPGNQSNKIDDDVKAVNFKTVQEA 506
           +C++D + +N    C+ +KCI++  +  + K G   +   Q  K++D+V+    K +   
Sbjct: 53  NCVVDRVNRNRCQYCRLKKCIELGMSRDAVKFGR--MSKKQREKVEDEVQVRMHKELAAN 110

Query: 507 INTXTTEYRDKTPEP 551
                  Y D +P P
Sbjct: 111 GLGYQAIYGDYSPPP 125


>Z71258-9|CAI46548.1|  437|Caenorhabditis elegans Hypothetical
           protein C01H6.5c protein.
          Length = 437

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 13/50 (26%), Positives = 29/50 (58%)
 Frame = +3

Query: 327 HCLIDCLKKNLKYVCKTRKCIQMQHAYVSPKEGEDCVPGNQSNKIDDDVK 476
           +C++D + +N    C+ +KCI++  +  + K G   +   Q  K++D+V+
Sbjct: 53  NCVVDRVNRNRCQYCRLKKCIELGMSRDAVKFGR--MSKKQREKVEDEVR 100


>Z71258-8|CAD30427.1|  553|Caenorhabditis elegans Hypothetical
           protein C01H6.5b protein.
          Length = 553

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 13/50 (26%), Positives = 29/50 (58%)
 Frame = +3

Query: 327 HCLIDCLKKNLKYVCKTRKCIQMQHAYVSPKEGEDCVPGNQSNKIDDDVK 476
           +C++D + +N    C+ +KCI++  +  + K G   +   Q  K++D+V+
Sbjct: 169 NCVVDRVNRNRCQYCRLKKCIELGMSRDAVKFGR--MSKKQREKVEDEVR 216


>Z71258-7|CAA95782.2|  588|Caenorhabditis elegans Hypothetical
           protein C01H6.5a protein.
          Length = 588

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 13/50 (26%), Positives = 29/50 (58%)
 Frame = +3

Query: 327 HCLIDCLKKNLKYVCKTRKCIQMQHAYVSPKEGEDCVPGNQSNKIDDDVK 476
           +C++D + +N    C+ +KCI++  +  + K G   +   Q  K++D+V+
Sbjct: 204 NCVVDRVNRNRCQYCRLKKCIELGMSRDAVKFGR--MSKKQREKVEDEVR 251


>U51136-1|AAA96057.1|  553|Caenorhabditis elegans CHR3 protein.
          Length = 553

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 13/50 (26%), Positives = 29/50 (58%)
 Frame = +3

Query: 327 HCLIDCLKKNLKYVCKTRKCIQMQHAYVSPKEGEDCVPGNQSNKIDDDVK 476
           +C++D + +N    C+ +KCI++  +  + K G   +   Q  K++D+V+
Sbjct: 169 NCVVDRVNRNRCQYCRLKKCIELGMSRDAVKFGR--MSKKQREKVEDEVR 216


>U13075-1|AAA96983.1|  553|Caenorhabditis elegans steroid hormone
           receptor familymember CHR3 protein.
          Length = 553

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 13/50 (26%), Positives = 29/50 (58%)
 Frame = +3

Query: 327 HCLIDCLKKNLKYVCKTRKCIQMQHAYVSPKEGEDCVPGNQSNKIDDDVK 476
           +C++D + +N    C+ +KCI++  +  + K G   +   Q  K++D+V+
Sbjct: 169 NCVVDRVNRNRCQYCRLKKCIELGMSRDAVKFGR--MSKKQREKVEDEVR 216


>AF332203-1|AAK17974.1|  588|Caenorhabditis elegans nuclear receptor
           NHR-23 protein.
          Length = 588

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 13/50 (26%), Positives = 29/50 (58%)
 Frame = +3

Query: 327 HCLIDCLKKNLKYVCKTRKCIQMQHAYVSPKEGEDCVPGNQSNKIDDDVK 476
           +C++D + +N    C+ +KCI++  +  + K G   +   Q  K++D+V+
Sbjct: 204 NCVVDRVNRNRCQYCRLKKCIELGMSRDAVKFGR--MSKKQREKVEDEVR 251


>AF332202-1|AAK17973.1|  573|Caenorhabditis elegans nuclear receptor
           NHR-23 protein.
          Length = 573

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 13/50 (26%), Positives = 29/50 (58%)
 Frame = +3

Query: 327 HCLIDCLKKNLKYVCKTRKCIQMQHAYVSPKEGEDCVPGNQSNKIDDDVK 476
           +C++D + +N    C+ +KCI++  +  + K G   +   Q  K++D+V+
Sbjct: 189 NCVVDRVNRNRCQYCRLKKCIELGMSRDAVKFGR--MSKKQREKVEDEVR 236


>U39994-1|AAB37019.1|  326|Caenorhabditis elegans Hypothetical
           protein C48C5.3 protein.
          Length = 326

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -3

Query: 551 WFWCFISVFSCXCIYCFLNGFKIDSLYVIIYFVGLIARYTVFTL 420
           WF CF+ VF C  + CF      D    ++     +  Y VFT+
Sbjct: 153 WFGCFVFVFICWYLECFTCE---DDCRQLMILPNKVVMYIVFTV 193


>Z68218-3|CAA92473.1|  325|Caenorhabditis elegans Hypothetical
           protein K01H12.3 protein.
          Length = 325

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
 Frame = +2

Query: 119 LDDCEEXILVYLEFKDSVNIEKYRNIHILGIDSKNPIVQM-DDTFFIGKYDNPFGTYLFF 295
           +D  E+  L ++E +  VN+  YRNI    ++S + +VQ+   +F    +D P  + LF+
Sbjct: 210 IDLSEQPFLEFMECEQHVNLNPYRNI----LNSFSFLVQLVSRSFQSCNFDEPLLSILFY 265

Query: 296 E 298
           +
Sbjct: 266 K 266


>U39994-2|AAB37017.1|  378|Caenorhabditis elegans Hypothetical
           protein C48C5.1 protein.
          Length = 378

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -3

Query: 491 FKIDSLYVIIYFVGLIARYTVFTLFRRHISM 399
           +K+ +LY+ I+ VG+I   T   + ++H  M
Sbjct: 52  YKVTALYIFIFLVGVIGNTTTCLVMKKHPMM 82


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,929,485
Number of Sequences: 27780
Number of extensions: 334916
Number of successful extensions: 1167
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3673557334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)