Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_C09.2
         (1315 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   4.5  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   4.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   4.5  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   4.5  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -3

Query: 494 GFKIDSLYVIIYFVGLIARYTVFTLFRRHI 405
           GF   S+++ +    LI  +  F + RRH+
Sbjct: 8   GFSASSVFLSLLIPALILYFIYFRISRRHL 37


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 330 CLIDCLKKNLKYVCKTRKCIQM 395
           C+ID  ++N    C+ +KC+ M
Sbjct: 152 CIIDKRQRNRCQYCRYQKCLAM 173


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 323 DPLFDRLSEKKFKICLQNKKMHSDATCLCV 412
           D + + L  +  ++C    + HSD+ CLC+
Sbjct: 332 DEIRESLDTQFLQVC--RSRRHSDSCCLCL 359


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 330 CLIDCLKKNLKYVCKTRKCIQM 395
           C+ID  ++N    C+ +KC+ M
Sbjct: 152 CIIDKRQRNRCQYCRYQKCLAM 173


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,761
Number of Sequences: 438
Number of extensions: 4084
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 45263751
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)