Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_C08.2
         (1287 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...   206   1e-51
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...   124   7e-27
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi...    95   4e-18
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ...    78   6e-13
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ...    75   5e-12
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0...    70   1e-10
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ...    60   2e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ...    58   5e-07
UniRef50_Q51612 Cluster: Putative uncharacterized protein; n=3; ...    55   3e-06
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0...    53   2e-05
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4...    45   0.005
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h...    44   0.006
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE...    42   0.046
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2...    36   2.3  
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ...    35   5.2  

>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score =  206 bits (502), Expect = 1e-51
 Identities = 100/124 (80%), Positives = 101/124 (81%)
 Frame = +3

Query: 498 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 677
           SK+  T    R  RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2   SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61

Query: 678 CRLPDTCPPFSLREAWRFLIAHAVGISVRCXSFAPSWAVCTNXXXXXXXXXXXVTIVLSX 857
           CRLPDTCPPFSLREAWRFLIAHAVGISVRC SFAPSWAVCTN           VTIVLS 
Sbjct: 62  CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSP 121

Query: 858 XR*D 869
            R D
Sbjct: 122 TRKD 125


>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score =  124 bits (298), Expect = 7e-27
 Identities = 74/124 (59%), Positives = 78/124 (62%)
 Frame = +3

Query: 318 RPTRGARRFALLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKA 497
           R  R   R    G +PLPRSLTR ARSFGCGERY+LT           G   E T  +  
Sbjct: 22  RQHRRVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTL 72

Query: 498 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 677
           SK      RPR  RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P
Sbjct: 73  SKEE---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLP 129

Query: 678 CRLP 689
             LP
Sbjct: 130 FGLP 133


>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
           organisms|Rep: Predicted protein - Nematostella
           vectensis
          Length = 97

 Score = 95.1 bits (226), Expect = 4e-18
 Identities = 45/54 (83%), Positives = 47/54 (87%)
 Frame = +3

Query: 516 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 677
           V+ PR  RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44  VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97


>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides capillosus ATCC 29799|Rep: Putative
           uncharacterized protein - Bacteroides capillosus ATCC
           29799
          Length = 37

 Score = 77.8 bits (183), Expect = 6e-13
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = +2

Query: 656 VRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 766
           +RSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV
Sbjct: 1   MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37


>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
           cellular organisms|Rep: Uncharacterized 9.4 kDa protein
           - Escherichia coli
          Length = 84

 Score = 74.5 bits (175), Expect = 5e-12
 Identities = 33/40 (82%), Positives = 36/40 (90%)
 Frame = +2

Query: 794 VHEPPVQPXRCALSGNYRLEXXPVRXELSPLAAATGNRIT 913
           +HEPPVQP RCALSGNYRLE  PVR +LSPLAAATGNRI+
Sbjct: 1   MHEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNRIS 40



 Score = 52.0 bits (119), Expect = 3e-05
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = +1

Query: 922  YVGGAXXFLKWWPNYG*TKKXVFGIXAL 1005
            YVGGA  FLKWWPNYG T++ VFGI AL
Sbjct: 44   YVGGATEFLKWWPNYGYTRRTVFGICAL 71


>UniRef50_UPI00015C640B Cluster: hypothetical protein
           CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
           BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
           Citrobacter koseri ATCC BAA-895
          Length = 99

 Score = 70.1 bits (164), Expect = 1e-10
 Identities = 38/82 (46%), Positives = 48/82 (58%)
 Frame = -2

Query: 884 VAIIXVLPXXTQDDSYXXXXXXXXXXXXRAHSPAWSERXTPN*DTYSVSYEKAPRFPKGE 705
           +A + V P  TQDDSY            RA+SPAWSER  P+ DT SVSYEKAPRFPKG+
Sbjct: 1   MAFLRVRPGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGK 60

Query: 704 RRTGIR*AAGSEQESARGSFQG 639
           +   +   +G  Q   R + +G
Sbjct: 61  KAEQV---SGKRQGRNRRAHEG 79



 Score = 48.8 bits (111), Expect = 3e-04
 Identities = 25/40 (62%), Positives = 27/40 (67%)
 Frame = -3

Query: 709 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 590
           +K  QVSGKRQGRNRRAHEGA+  K   SL      PPLT
Sbjct: 60  KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99


>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
           root|Rep: Putative uncharacterized protein - Escherichia
           coli
          Length = 61

 Score = 59.7 bits (138), Expect = 2e-07
 Identities = 28/36 (77%), Positives = 28/36 (77%)
 Frame = -2

Query: 506 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAE 399
           P    LLTCSF  YPLILWITVLPPLSEL PLAA E
Sbjct: 19  PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVE 54


>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
           Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. SS
          Length = 114

 Score = 58.0 bits (134), Expect = 5e-07
 Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
 Frame = +3

Query: 405 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 578
           C  R Q    R  G  +P+N  I  +R   + + + P T        F   S PLT+ITK
Sbjct: 22  CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81

Query: 579 IDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 677
           I  Q +  +T+ +YK T  FPL++PS +LLF P
Sbjct: 82  IYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114


>UniRef50_Q51612 Cluster: Putative uncharacterized protein; n=3;
            root|Rep: Putative uncharacterized protein - Plasmid
            ColE1
          Length = 96

 Score = 55.2 bits (127), Expect = 3e-06
 Identities = 37/73 (50%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
 Frame = -1

Query: 1056 VFFXIXVTNFFXK-LXVXQSXDTKYXFFSLXVVRPPLQEXXSTAY-IXRXVILLPVAAAS 883
            +F     TN F +   + QS DTKY   S+ VV P LQE  ST   I   +I LPVAAAS
Sbjct: 24   LFAGSRATNSFSEGNWLQQSADTKYCPSSVAVVGPLLQELCSTVCAIIALLIRLPVAAAS 83

Query: 882  GDNSCLTGLXSRR 844
            G  +CLTGL SRR
Sbjct: 84   GVKACLTGLDSRR 96


>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
           CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
           BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
           Citrobacter koseri ATCC BAA-895
          Length = 125

 Score = 52.8 bits (121), Expect = 2e-05
 Identities = 35/91 (38%), Positives = 38/91 (41%)
 Frame = +3

Query: 591 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCX 770
           VR GETRQD K         P       P       PPFSL  +     +   GIS RC 
Sbjct: 23  VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82

Query: 771 SFAPSWAVCTNXXXXXXXXXXXVTIVLSXXR 863
           SFAPSWAV  N           VT+ LS  R
Sbjct: 83  SFAPSWAVSKNPPFSPTAAPYPVTVHLSPTR 113


>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
           Bacteria|Rep: Putative uncharacterized protein 1 -
           Escherichia coli
          Length = 42

 Score = 44.8 bits (101), Expect = 0.005
 Identities = 22/42 (52%), Positives = 24/42 (57%)
 Frame = -2

Query: 884 VAIIXVLPXXTQDDSYXXXXXXXXXXXXRAHSPAWSERXTPN 759
           +A+   LP  TQDDSY            RAHSPAWSER TPN
Sbjct: 1   MALRRALPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN 42


>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
           Alpha-hemolysin - Aeromonas hydrophila
          Length = 59

 Score = 44.4 bits (100), Expect = 0.006
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = +2

Query: 425 HSKAVIRLSTESGDNAGKNM 484
           HSKAVIRLSTESGDNAGKNM
Sbjct: 40  HSKAVIRLSTESGDNAGKNM 59


>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
           Myxococcus xanthus
          Length = 486

 Score = 41.5 bits (93), Expect = 0.046
 Identities = 23/43 (53%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = +3

Query: 348 LLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 473
           +L ALPL RS TRC RS GCG      +  R YG PQ QG+ Q
Sbjct: 280 VLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322


>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
           cellular organisms|Rep: Putative uncharacterized protein
           1 - Escherichia coli
          Length = 47

 Score = 35.9 bits (79), Expect = 2.3
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -2

Query: 884 VAIIXVLPXXTQDDSYXXXXXXXXXXXXRAHSPAWSERXTPN*DT 750
           +A     P  TQ +SY             A+SPAWSER TP+ DT
Sbjct: 1   MAFYRAFPGWTQVNSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45


>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
           Burkholderia|Rep: Putative uncharacterized protein -
           Burkholderia pseudomallei (strain 668)
          Length = 755

 Score = 34.7 bits (76), Expect = 5.2
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = -3

Query: 736 MRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKR 632
           +R+R A RR  GG+  G+R+GRNR+  +   RG+R
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQ--QRGQR 387


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 793,823,417
Number of Sequences: 1657284
Number of extensions: 14867522
Number of successful extensions: 37876
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 36028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37835
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 131604446675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)