Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_C07.2
         (1285 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...   128   5e-31
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    28   0.51 
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      27   1.6  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   6.3  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score =  128 bits (308), Expect = 5e-31
 Identities = 62/150 (41%), Positives = 94/150 (62%), Gaps = 2/150 (1%)
 Frame = +3

Query: 525 RTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI-NNQPPIR-RGDG 698
           R   Y +PTPIQ    PI ++G++L+  AQTGSGKT A++LP I H+ + +  +  R   
Sbjct: 190 RKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSGKTAAFMLPMIHHLLDKEDSLELRTRN 249

Query: 699 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 878
           P  +++APTRELA QI      F H + ++    +GG   + Q + +  G  +++ATPGR
Sbjct: 250 PYIVIVAPTRELAIQIHDEGRKFAHGTKLKVCVSYGGTAVQHQLQLMRGGCHVLVATPGR 309

Query: 879 LIDFLEKGTTNLQRCTYLVLDEADRMLDMG 968
           L+DF+++G    +   ++VLDEADRMLDMG
Sbjct: 310 LLDFIDRGYVTFENVNFVVLDEADRMLDMG 339


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 28.3 bits (60), Expect = 0.51
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +3

Query: 573 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 698
           P+A + K L   AQ  + ++   I  A+V +  Q  +RR DG
Sbjct: 451 PVASNYKTLNYKAQKAAARSHVKIFKALVRLRKQRTLRRNDG 492


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 458 RFIILIQYFEAANFPDYVQQGVKNNGLQRTDAHS 559
           + +++  Y E  +  DY+Q+ V N  + +T AHS
Sbjct: 329 QMLLITDYHELGSLHDYLQKRVLNPHMLKTLAHS 362


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 6.3
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +3

Query: 879 LIDFLEKGTTNLQRCTYLVLDEADR 953
           L+ ++E+GT  +Q  + L++DE  +
Sbjct: 133 LLQYIEQGTVRVQDISLLIVDECHK 157


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 911,586
Number of Sequences: 2352
Number of extensions: 17312
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 147557667
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)