Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_C07.2
(1285 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 212 5e-55
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 168 6e-42
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 165 6e-41
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 163 2e-40
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 155 5e-38
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 141 1e-33
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 139 4e-33
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 139 4e-33
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 139 4e-33
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 124 1e-28
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 112 4e-25
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 112 4e-25
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 112 4e-25
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 110 2e-24
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 110 2e-24
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 110 2e-24
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 109 5e-24
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 109 5e-24
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 107 2e-23
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 107 2e-23
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 105 9e-23
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 102 6e-22
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 102 6e-22
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 101 8e-22
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 101 1e-21
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 101 1e-21
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 99 8e-21
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 93 5e-19
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 93 5e-19
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 92 7e-19
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 92 7e-19
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 91 2e-18
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 87 3e-17
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 84 2e-16
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 83 5e-16
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 81 2e-15
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 81 2e-15
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 78 1e-14
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 76 5e-14
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 72 8e-13
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 71 2e-12
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 69 9e-12
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 64 3e-10
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 64 3e-10
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 64 3e-10
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 56 5e-08
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 54 2e-07
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 51 2e-06
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 48 2e-05
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 41 0.002
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 40 0.004
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 40 0.004
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 39 0.009
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 39 0.009
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 35 0.11
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 33 0.33
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 31 2.3
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 31 2.3
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 7.1
U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis ... 29 7.1
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 29 7.1
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 29 9.4
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 212 bits (517), Expect = 5e-55
Identities = 97/155 (62%), Positives = 128/155 (82%), Gaps = 1/155 (0%)
Frame = +3
Query: 537 YKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 716
+++PT IQ+ WPIAMSG++++ +A+TGSGKTLA++LPA+VHI Q +RG+GP LVL
Sbjct: 149 FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVL 208
Query: 717 APTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLE 896
PTRELAQQ+Q+V+ DF H+ ++ TC+FGGA K QARDLERGV+IV+ATPGRL+DFL+
Sbjct: 209 LPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFLD 268
Query: 897 KGTTNLQRCTYLVLDEADRMLDMGLNHN-QKIIEQ 998
GTTN+++C+YLVLDEADRMLDMG +KII Q
Sbjct: 269 NGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQ 303
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical protein
C46F11.4 protein.
Length = 811
Score = 168 bits (409), Expect = 6e-42
Identities = 78/160 (48%), Positives = 109/160 (68%), Gaps = 1/160 (0%)
Frame = +3
Query: 525 RTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 704
R Y++PTPIQA P A+SG++++G+A+TGSGKT AY+ PAIVHI +QP ++ G+GP+
Sbjct: 281 RKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPV 340
Query: 705 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE-RGVEIVIATPGRL 881
A+++ PTRELA Q+ Q A F + C +GG K EQ+ +L+ G E+V+ TPGR+
Sbjct: 341 AVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVCTPGRI 400
Query: 882 IDFLEKGTTNLQRCTYLVLDEADRMLDMGLNHNQKIIEQY 1001
ID ++ G TN R T+LV DEADRM DMG K I +
Sbjct: 401 IDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQVKSISDH 440
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 165 bits (401), Expect = 6e-41
Identities = 80/162 (49%), Positives = 111/162 (68%), Gaps = 5/162 (3%)
Frame = +3
Query: 525 RTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD--- 695
+ +GY EPTPIQ Q PI + ++++GVA+TGSGKT A++LP +V I + P + R +
Sbjct: 317 KEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRD 376
Query: 696 -GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATP 872
GP A+++APTRELAQQI++ FG ++ V GGA + +Q L GVE+VIATP
Sbjct: 377 LGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATP 436
Query: 873 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGLNHN-QKIIE 995
GRL+D LE L +CTY++LDEADRMLDMG + QK++E
Sbjct: 437 GRLLDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVLE 478
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 163 bits (397), Expect = 2e-40
Identities = 80/147 (54%), Positives = 102/147 (69%), Gaps = 3/147 (2%)
Frame = +3
Query: 537 YKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 716
Y +PT IQAQ P MSG++++G+A+TGSGKTLA++LP HI +QP + GDGPIA++L
Sbjct: 324 YSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVIL 383
Query: 717 APTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLE 896
APTRELA Q + A F ++ C +GG EQ DL+RG EIV+ TPGR+ID L
Sbjct: 384 APTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLA 443
Query: 897 KGT---TNLQRCTYLVLDEADRMLDMG 968
+ TNL+R TYLVLDEADRM D G
Sbjct: 444 ANSGKVTNLRRVTYLVLDEADRMFDKG 470
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 155 bits (377), Expect = 5e-38
Identities = 77/154 (50%), Positives = 105/154 (68%), Gaps = 6/154 (3%)
Frame = +3
Query: 525 RTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ-PPIRRGD-- 695
R G+++P+PIQ+Q WP+ +SG++ +GV+QTGSGKTLA++LPA++HI+ Q + D
Sbjct: 100 RKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEE 159
Query: 696 ---GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIA 866
P LVL+PTRELAQQI+ + + Y ++ C++GG + EQ GVEIVIA
Sbjct: 160 QKPSPFVLVLSPTRELAQQIEGEVKKYSYNGY-KSVCLYGGGSRPEQVEACRGGVEIVIA 218
Query: 867 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 968
TPGRL D G +L TY+VLDEADRMLDMG
Sbjct: 219 TPGRLTDLSNDGVISLASVTYVVLDEADRMLDMG 252
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 141 bits (341), Expect = 1e-33
Identities = 74/163 (45%), Positives = 99/163 (60%), Gaps = 10/163 (6%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPI 704
G PT IQ QG P+A+SG++++G+A TGSGKT+ ++LP ++ Q P R +GP
Sbjct: 209 GIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPF 268
Query: 705 ALVLAPTRELAQQIQQVAADF-------GHTSYVRNTCVFGGAPKREQARDLERGVEIVI 863
L++ P+RELA+QI + + G C+ GG P EQA+D+ G+ IV+
Sbjct: 269 GLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCI-GGVPIGEQAKDVRDGIHIVV 327
Query: 864 ATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGLNHNQKII 992
ATPGRL D L K NL+ C YLVLDEADRMLDMG K I
Sbjct: 328 ATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSI 370
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 139 bits (336), Expect = 4e-33
Identities = 79/167 (47%), Positives = 102/167 (61%), Gaps = 12/167 (7%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINN------QPPI---- 683
GY +PTP+Q P ++ ++L+ AQTGSGKT A++LP I HI +PP
Sbjct: 158 GYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNG 217
Query: 684 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK-REQARDLERGVEIV 860
RR P ALVL+PTRELA QI + A F + S ++ ++GG R+Q L G I+
Sbjct: 218 RRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHIL 277
Query: 861 IATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGLNHN-QKIIEQ 998
IATPGRLID +E+G L C YLVLDEADRMLDMG +KI+ Q
Sbjct: 278 IATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQ 324
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 139 bits (336), Expect = 4e-33
Identities = 79/167 (47%), Positives = 102/167 (61%), Gaps = 12/167 (7%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINN------QPPI---- 683
GY +PTP+Q P ++ ++L+ AQTGSGKT A++LP I HI +PP
Sbjct: 142 GYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNG 201
Query: 684 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK-REQARDLERGVEIV 860
RR P ALVL+PTRELA QI + A F + S ++ ++GG R+Q L G I+
Sbjct: 202 RRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHIL 261
Query: 861 IATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGLNHN-QKIIEQ 998
IATPGRLID +E+G L C YLVLDEADRMLDMG +KI+ Q
Sbjct: 262 IATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQ 308
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 139 bits (336), Expect = 4e-33
Identities = 79/167 (47%), Positives = 102/167 (61%), Gaps = 12/167 (7%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINN------QPPI---- 683
GY +PTP+Q P ++ ++L+ AQTGSGKT A++LP I HI +PP
Sbjct: 139 GYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNG 198
Query: 684 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK-REQARDLERGVEIV 860
RR P ALVL+PTRELA QI + A F + S ++ ++GG R+Q L G I+
Sbjct: 199 RRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHIL 258
Query: 861 IATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGLNHN-QKIIEQ 998
IATPGRLID +E+G L C YLVLDEADRMLDMG +KI+ Q
Sbjct: 259 IATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQ 305
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 124 bits (299), Expect = 1e-28
Identities = 69/170 (40%), Positives = 99/170 (58%), Gaps = 13/170 (7%)
Frame = +3
Query: 525 RTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPI------- 683
+T GY PTP+Q P G++L+ AQTGSGKT A+++P + I P
Sbjct: 182 KTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVT 241
Query: 684 ----RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK-REQARDLERG 848
R+ P ALVL+PTREL+ QI + F + + + + ++GG ++Q L G
Sbjct: 242 SSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTPITSALLYGGRENYKDQIHKLRLG 301
Query: 849 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGLNHN-QKIIE 995
I+IATPGRLID +++G ++ C YLVLDEADRMLDMG ++I+E
Sbjct: 302 CHILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRMLDMGFEPQIRQIVE 351
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 112 bits (270), Expect = 4e-25
Identities = 60/161 (37%), Positives = 89/161 (55%), Gaps = 5/161 (3%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR-GDG---P 701
GY + TPIQ P+ G +++ AQTGSGKT A++LP + + + + G+G P
Sbjct: 360 GYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYP 419
Query: 702 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 881
++L PTRELA QI F + + + V+GG +E+G I++ T GR+
Sbjct: 420 RCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRI 479
Query: 882 IDFLEKGTTNLQRCTYLVLDEADRMLD-MGLNHNQKIIEQY 1001
F E+GT L +C + VLDEADRM+D MG + + I Y
Sbjct: 480 KHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNY 520
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 112 bits (270), Expect = 4e-25
Identities = 60/161 (37%), Positives = 89/161 (55%), Gaps = 5/161 (3%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR-GDG---P 701
GY + TPIQ P+ G +++ AQTGSGKT A++LP + + + + G+G P
Sbjct: 360 GYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYP 419
Query: 702 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 881
++L PTRELA QI F + + + V+GG +E+G I++ T GR+
Sbjct: 420 RCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRI 479
Query: 882 IDFLEKGTTNLQRCTYLVLDEADRMLD-MGLNHNQKIIEQY 1001
F E+GT L +C + VLDEADRM+D MG + + I Y
Sbjct: 480 KHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNY 520
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line helicase
protein 1 protein.
Length = 763
Score = 112 bits (270), Expect = 4e-25
Identities = 60/161 (37%), Positives = 89/161 (55%), Gaps = 5/161 (3%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR-GDG---P 701
GY + TPIQ P+ G +++ AQTGSGKT A++LP + + + + G+G P
Sbjct: 360 GYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYP 419
Query: 702 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 881
++L PTRELA QI F + + + V+GG +E+G I++ T GR+
Sbjct: 420 RCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRI 479
Query: 882 IDFLEKGTTNLQRCTYLVLDEADRMLD-MGLNHNQKIIEQY 1001
F E+GT L +C + VLDEADRM+D MG + + I Y
Sbjct: 480 KHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNY 520
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 110 bits (264), Expect = 2e-24
Identities = 59/161 (36%), Positives = 88/161 (54%), Gaps = 5/161 (3%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR-GDG---P 701
GY + TPIQ P+ G +++ AQTGSGKT A++LP + + ++ + G+G P
Sbjct: 571 GYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYP 630
Query: 702 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 881
++L PTREL QI F + + + V+GG +E+G I++ T GR+
Sbjct: 631 RCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRI 690
Query: 882 IDFLEKGTTNLQRCTYLVLDEADRMLD-MGLNHNQKIIEQY 1001
F E+GT L +C + VLDEADRM+D MG + I Y
Sbjct: 691 KHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNY 731
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 110 bits (264), Expect = 2e-24
Identities = 59/161 (36%), Positives = 88/161 (54%), Gaps = 5/161 (3%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR-GDG---P 701
GY + TPIQ P+ G +++ AQTGSGKT A++LP + + ++ + G+G P
Sbjct: 571 GYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYP 630
Query: 702 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 881
++L PTREL QI F + + + V+GG +E+G I++ T GR+
Sbjct: 631 RCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRI 690
Query: 882 IDFLEKGTTNLQRCTYLVLDEADRMLD-MGLNHNQKIIEQY 1001
F E+GT L +C + VLDEADRM+D MG + I Y
Sbjct: 691 KHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNY 731
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 110 bits (264), Expect = 2e-24
Identities = 59/161 (36%), Positives = 88/161 (54%), Gaps = 5/161 (3%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR-GDG---P 701
GY + TPIQ P+ G +++ AQTGSGKT A++LP + + ++ + G+G P
Sbjct: 571 GYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYP 630
Query: 702 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 881
++L PTREL QI F + + + V+GG +E+G I++ T GR+
Sbjct: 631 RCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRI 690
Query: 882 IDFLEKGTTNLQRCTYLVLDEADRMLD-MGLNHNQKIIEQY 1001
F E+GT L +C + VLDEADRM+D MG + I Y
Sbjct: 691 KHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNY 731
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 109 bits (261), Expect = 5e-24
Identities = 62/161 (38%), Positives = 86/161 (53%), Gaps = 5/161 (3%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DG---P 701
GY TPIQ P+ GK+++ AQTGSGKT A++LP + + + + G +G P
Sbjct: 317 GYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYP 376
Query: 702 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 881
++L PTRELA QI F + S + V+GG + +G I++ T GR+
Sbjct: 377 RCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRV 436
Query: 882 IDFLEKGTTNLQRCTYLVLDEADRMLD-MGLNHNQKIIEQY 1001
F E G L +C YLVLDEADRM+D MG + I Y
Sbjct: 437 KHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINY 477
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line helicase
protein 3 protein.
Length = 720
Score = 109 bits (261), Expect = 5e-24
Identities = 62/161 (38%), Positives = 86/161 (53%), Gaps = 5/161 (3%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DG---P 701
GY TPIQ P+ GK+++ AQTGSGKT A++LP + + + + G +G P
Sbjct: 317 GYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYP 376
Query: 702 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 881
++L PTRELA QI F + S + V+GG + +G I++ T GR+
Sbjct: 377 RCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRV 436
Query: 882 IDFLEKGTTNLQRCTYLVLDEADRMLD-MGLNHNQKIIEQY 1001
F E G L +C YLVLDEADRM+D MG + I Y
Sbjct: 437 KHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINY 477
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 107 bits (257), Expect = 2e-23
Identities = 55/145 (37%), Positives = 86/145 (59%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 713
G+ +PTPIQ + P M GK++V +++TGSGKT A+++P + + R G AL+
Sbjct: 43 GFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKR----RDTTGIRALM 98
Query: 714 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL 893
++PTRELA Q +V + G + +R C+ GG EQ + +I++ATPGRL+ +
Sbjct: 99 VSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPDILLATPGRLLHVI 158
Query: 894 EKGTTNLQRCTYLVLDEADRMLDMG 968
+ L Y+V DEADR+ +MG
Sbjct: 159 VEMDLRLSYVQYVVFDEADRLFEMG 183
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 107 bits (257), Expect = 2e-23
Identities = 55/145 (37%), Positives = 86/145 (59%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 713
G+ +PTPIQ + P M GK++V +++TGSGKT A+++P + + R G AL+
Sbjct: 43 GFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKR----RDTTGIRALM 98
Query: 714 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL 893
++PTRELA Q +V + G + +R C+ GG EQ + +I++ATPGRL+ +
Sbjct: 99 VSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPDILLATPGRLLHVI 158
Query: 894 EKGTTNLQRCTYLVLDEADRMLDMG 968
+ L Y+V DEADR+ +MG
Sbjct: 159 VEMDLRLSYVQYVVFDEADRLFEMG 183
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 105 bits (251), Expect = 9e-23
Identities = 54/142 (38%), Positives = 85/142 (59%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 713
G+++P+PIQ +A++G++++ A+ G+GKT AY +P I I QP ++ A+V
Sbjct: 62 GWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ---AMV 116
Query: 714 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL 893
+ PTRELA Q Q+ + ++ GG R+ L V +VIATPGR++D +
Sbjct: 117 IVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVHLVIATPGRILDLM 176
Query: 894 EKGTTNLQRCTYLVLDEADRML 959
EKG ++ C LVLDEAD++L
Sbjct: 177 EKGVAKMEHCKTLVLDEADKLL 198
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.elegans
mRNA for eIF-4A homologue. ).
Length = 402
Score = 102 bits (244), Expect = 6e-22
Identities = 59/165 (35%), Positives = 90/165 (54%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 713
G+++P+ IQ + +GK+++ AQ+G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 714 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL 893
+APTRELAQQIQ+V + G V GG R+ R LE G+ +V+ TPGR+ D +
Sbjct: 103 MAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMI 162
Query: 894 EKGTTNLQRCTYLVLDEADRMLDMGLNHNQKIIEQYAXXXIDVXV 1028
+ + R VLDEAD ML G +I E + DV V
Sbjct: 163 NRNALDTSRIKMFVLDEADEMLSRGF--KDQIYEVFRSMPQDVQV 205
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 102 bits (244), Expect = 6e-22
Identities = 59/165 (35%), Positives = 90/165 (54%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 713
G+++P+ IQ + +GK+++ AQ+G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 714 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL 893
+APTRELAQQIQ+V + G V GG R+ R LE G+ +V+ TPGR+ D +
Sbjct: 103 MAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMI 162
Query: 894 EKGTTNLQRCTYLVLDEADRMLDMGLNHNQKIIEQYAXXXIDVXV 1028
+ + R VLDEAD ML G +I E + DV V
Sbjct: 163 NRNALDTSRIKMFVLDEADEMLSRGF--KDQIYEVFRSMPQDVQV 205
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 101 bits (243), Expect = 8e-22
Identities = 60/147 (40%), Positives = 86/147 (58%), Gaps = 2/147 (1%)
Frame = +3
Query: 531 MGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 710
+G+ +P+ IQ P A+ GK+++G+A+TGSGKT A+ +P + + + P L
Sbjct: 62 LGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHP-----QAFFCL 116
Query: 711 VLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDF 890
VL PTRELA QI Q G + + GG QA L R I++ATPGRL+D
Sbjct: 117 VLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALARRPHIIVATPGRLVDH 176
Query: 891 LE--KGTTNLQRCTYLVLDEADRMLDM 965
LE KG NL+ +L++DEADR+L+M
Sbjct: 177 LENTKG-FNLKALKFLIMDEADRILNM 202
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 101 bits (241), Expect = 1e-21
Identities = 60/160 (37%), Positives = 88/160 (55%), Gaps = 4/160 (2%)
Frame = +3
Query: 525 RTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 704
+TM K TP+QA P + G +++G A+TG+GKTLA+ +P + ++ P G
Sbjct: 105 QTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPY-----GIY 159
Query: 705 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 884
AL+L PTRELA QI + G ++ + + GG QAR+L +V+ATPGRL
Sbjct: 160 ALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLA 219
Query: 885 DFLEKGTTNL----QRCTYLVLDEADRMLDMGLNHNQKII 992
D +E + ++ + VLDEADRML+ N K I
Sbjct: 220 DLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPI 259
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 101 bits (241), Expect = 1e-21
Identities = 60/160 (37%), Positives = 88/160 (55%), Gaps = 4/160 (2%)
Frame = +3
Query: 525 RTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 704
+TM K TP+QA P + G +++G A+TG+GKTLA+ +P + ++ P G
Sbjct: 105 QTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPY-----GIY 159
Query: 705 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 884
AL+L PTRELA QI + G ++ + + GG QAR+L +V+ATPGRL
Sbjct: 160 ALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLA 219
Query: 885 DFLEKGTTNL----QRCTYLVLDEADRMLDMGLNHNQKII 992
D +E + ++ + VLDEADRML+ N K I
Sbjct: 220 DLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPI 259
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 98.7 bits (235), Expect = 8e-21
Identities = 55/147 (37%), Positives = 91/147 (61%), Gaps = 1/147 (0%)
Frame = +3
Query: 531 MGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 710
+G+ T IQA+ + GK+++ A+TGSGKTLA++LPAI + ++ ++ +G +
Sbjct: 86 LGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVI 144
Query: 711 VLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDF 890
+++PTREL+ Q V ++ S + V GG+ + + L +GV I++ATPGRL+D
Sbjct: 145 IVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVATPGRLLDH 204
Query: 891 LEKGTTNLQR-CTYLVLDEADRMLDMG 968
L+ L R L++DEADR+LD+G
Sbjct: 205 LQNTDNFLVRNMKCLIIDEADRILDIG 231
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 92.7 bits (220), Expect = 5e-19
Identities = 54/153 (35%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Frame = +3
Query: 525 RTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG---- 692
+ M PTPIQ + M G ++V A TGSGKTLA+++P ++ + + R
Sbjct: 752 KRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDE 811
Query: 693 -DGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER--GVEIVI 863
P L++APTREL Q A + + ++ FGG + + L + I++
Sbjct: 812 KPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILV 871
Query: 864 ATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 962
AT GRL DF+ G +L + Y+VLDEADRM+D
Sbjct: 872 ATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVD 904
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 92.7 bits (220), Expect = 5e-19
Identities = 54/153 (35%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Frame = +3
Query: 525 RTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG---- 692
+ M PTPIQ + M G ++V A TGSGKTLA+++P ++ + + R
Sbjct: 752 KRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDE 811
Query: 693 -DGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER--GVEIVI 863
P L++APTREL Q A + + ++ FGG + + L + I++
Sbjct: 812 KPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILV 871
Query: 864 ATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 962
AT GRL DF+ G +L + Y+VLDEADRM+D
Sbjct: 872 ATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVD 904
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 92.3 bits (219), Expect = 7e-19
Identities = 52/156 (33%), Positives = 82/156 (52%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 713
G+++P+ IQ + P + ++++ AQ+G+GKT + + + ++ Q +R AL+
Sbjct: 45 GFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALI 99
Query: 714 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL 893
L+PTRELA QIQ+V G V+ GG E R L+ G +V TPGR+ D +
Sbjct: 100 LSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMI 159
Query: 894 EKGTTNLQRCTYLVLDEADRMLDMGLNHNQKIIEQY 1001
+ + LVLDEAD ML+ G I +Y
Sbjct: 160 RRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRY 195
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 92.3 bits (219), Expect = 7e-19
Identities = 52/156 (33%), Positives = 82/156 (52%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 713
G+++P+ IQ + P + ++++ AQ+G+GKT + + + ++ Q +R AL+
Sbjct: 45 GFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALI 99
Query: 714 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL 893
L+PTRELA QIQ+V G V+ GG E R L+ G +V TPGR+ D +
Sbjct: 100 LSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMI 159
Query: 894 EKGTTNLQRCTYLVLDEADRMLDMGLNHNQKIIEQY 1001
+ + LVLDEAD ML+ G I +Y
Sbjct: 160 RRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRY 195
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 91.1 bits (216), Expect = 2e-18
Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Frame = +3
Query: 537 YKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGP 701
Y IQ P + G +++G A+T +GKT A+ LP I I + R+ DGP
Sbjct: 401 YNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGP 460
Query: 702 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 881
+AL+LAPTRELA QI + + + + +G + + ++ G +I+I T GR+
Sbjct: 461 LALILAPTRELAAQIHEALRTYCQNTDIIVLLSYGQSDRARSLNEIRNGCDILIGTCGRI 520
Query: 882 IDFLEKGTTNLQRCTYLVLDEADRML 959
+DF K +L +LV DEADR+L
Sbjct: 521 MDFTVKSHISLLHLRFLVFDEADRLL 546
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 87.0 bits (206), Expect = 3e-17
Identities = 48/120 (40%), Positives = 67/120 (55%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 713
GY +PTPIQ P+A++GK++ A TG+GKT A++LP + + +P + LV
Sbjct: 167 GYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILERMIYRP--KGASCTRVLV 224
Query: 714 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL 893
L PTRELA Q+ QV + GG + Q L G ++V+ATPGRLID L
Sbjct: 225 LVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALRSGPDVVVATPGRLIDHL 284
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 84.2 bits (199), Expect = 2e-16
Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
Frame = +3
Query: 537 YKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 716
Y +PT IQ +++G ++VG A+TGSGKTLA ++P ++ + G AL++
Sbjct: 96 YTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDYGLGALII 154
Query: 717 APTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL- 893
+PTRELA Q G V GG+ + R+ G+ I++ TPGRL+ +
Sbjct: 155 SPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFE-RNRISGINIIVCTPGRLLQHMD 213
Query: 894 EKGTTNLQRCTYLVLDEADRMLDMGLN 974
E + LVLDEADRMLDMG +
Sbjct: 214 ENAQMSCDSLQVLVLDEADRMLDMGFS 240
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 82.6 bits (195), Expect = 5e-16
Identities = 55/159 (34%), Positives = 89/159 (55%), Gaps = 13/159 (8%)
Frame = +3
Query: 531 MGYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI------NNQPPIRR 689
MG+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + + + +
Sbjct: 173 MGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTE 232
Query: 690 GDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL-ERGVEIVIA 866
GP AL++APTREL QI + T+ + T + GG + +Q R + ++ +IV+A
Sbjct: 233 VRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVA 292
Query: 867 TPGRLIDFLEKGTT-----NLQRCTYLVLDEADRMLDMG 968
TPGRL +++ T + LV+DE DRM++ G
Sbjct: 293 TPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEG 331
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 81.0 bits (191), Expect = 2e-15
Identities = 42/143 (29%), Positives = 83/143 (58%), Gaps = 1/143 (0%)
Frame = +3
Query: 537 YKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 716
+ P+P+QA+ P+ + G++++ A++G+GKTL + + A+ ++++ R +++
Sbjct: 42 FDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDS-----RSSHIQKVIV 96
Query: 717 APTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG-VEIVIATPGRLIDFL 893
PTRE++ QI++ T R + GG+ + DL++ +IVI TPGR+ +
Sbjct: 97 TPTREISVQIKETVRKVAPTG-ARTSVYVGGSAHKLNLIDLKQTRPQIVIGTPGRIAQLV 155
Query: 894 EKGTTNLQRCTYLVLDEADRMLD 962
+ G N+ + VLDEAD+++D
Sbjct: 156 KLGAMNMSHVDFFVLDEADKLMD 178
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 81.0 bits (191), Expect = 2e-15
Identities = 42/143 (29%), Positives = 83/143 (58%), Gaps = 1/143 (0%)
Frame = +3
Query: 537 YKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 716
+ P+P+QA+ P+ + G++++ A++G+GKTL + + A+ ++++ R +++
Sbjct: 42 FDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDS-----RSSHIQKVIV 96
Query: 717 APTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG-VEIVIATPGRLIDFL 893
PTRE++ QI++ T R + GG+ + DL++ +IVI TPGR+ +
Sbjct: 97 TPTREISVQIKETVRKVAPTG-ARTSVYVGGSAHKLNLIDLKQTRPQIVIGTPGRIAQLV 155
Query: 894 EKGTTNLQRCTYLVLDEADRMLD 962
+ G N+ + VLDEAD+++D
Sbjct: 156 KLGAMNMSHVDFFVLDEADKLMD 178
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 78.2 bits (184), Expect = 1e-14
Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 13/157 (8%)
Frame = +3
Query: 537 YKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI------NNQPPIRRGD 695
+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + + + +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 696 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL-ERGVEIVIATP 872
GP AL++APTREL QI + T+ + T + GG + +Q R + ++ +IV+ATP
Sbjct: 68 GPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATP 127
Query: 873 GRLIDFLEKGTT-----NLQRCTYLVLDEADRMLDMG 968
GRL +++ T + LV+DE DRM++ G
Sbjct: 128 GRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEG 164
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 76.2 bits (179), Expect = 5e-14
Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 1/147 (0%)
Frame = +3
Query: 531 MGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIA 707
+G+++ +Q +A+ KN++G A+TGSGKT A+++P + + + G GP A
Sbjct: 107 LGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSA 166
Query: 708 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 887
+++APT+EL QI ++ + E + LE +V+ TPG+L+
Sbjct: 167 VIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPGKLLR 226
Query: 888 FLEKGTTNLQRCTYLVLDEADRMLDMG 968
+YLV+DEAD +L G
Sbjct: 227 MCSLRPEYCTLVSYLVMDEADLLLSFG 253
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 72.1 bits (169), Expect = 8e-13
Identities = 49/159 (30%), Positives = 85/159 (53%), Gaps = 4/159 (2%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 713
G++ P+ +Q + P A+ G ++V A++G GKT +++ + + P+ DG +++V
Sbjct: 59 GFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLE---PV---DGEVSVV 112
Query: 714 -LAPTRELAQQIQQVAADFG-HTSYVRNTCVFGG-APKREQARDLERGVEIVIATPGRLI 884
+ TRELA QI + F + V+ FGG A K+++ R IV+ TPGR++
Sbjct: 113 CMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRML 172
Query: 885 DFLEKGTTNLQRCTYLVLDEADRML-DMGLNHNQKIIEQ 998
G L + Y VLDE D+M+ D + + + I+Q
Sbjct: 173 ALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIKQ 211
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 71.3 bits (167), Expect = 1e-12
Identities = 46/145 (31%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 713
G++ P+ +Q + P A+ G ++V A++G GKT +++ + + P+ DG +++V
Sbjct: 60 GFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLE---PV---DGEVSVV 113
Query: 714 -LAPTRELAQQIQQVAADFG-HTSYVRNTCVFGG-APKREQARDLERGVEIVIATPGRLI 884
+ TRELA QI + F + V+ FGG A K+++ R IV+ TPGR++
Sbjct: 114 CMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRML 173
Query: 885 DFLEKGTTNLQRCTYLVLDEADRML 959
G L + Y VLDE D+M+
Sbjct: 174 ALARSGKLKLDKVKYFVLDECDKMI 198
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 71.3 bits (167), Expect = 1e-12
Identities = 46/145 (31%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 713
G++ P+ +Q + P A+ G ++V A++G GKT +++ + + P+ DG +++V
Sbjct: 60 GFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLE---PV---DGEVSVV 113
Query: 714 -LAPTRELAQQIQQVAADFG-HTSYVRNTCVFGG-APKREQARDLERGVEIVIATPGRLI 884
+ TRELA QI + F + V+ FGG A K+++ R IV+ TPGR++
Sbjct: 114 CMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRML 173
Query: 885 DFLEKGTTNLQRCTYLVLDEADRML 959
G L + Y VLDE D+M+
Sbjct: 174 ALARSGKLKLDKVKYFVLDECDKMI 198
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 70.9 bits (166), Expect = 2e-12
Identities = 49/147 (33%), Positives = 81/147 (55%), Gaps = 5/147 (3%)
Frame = +3
Query: 540 KEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA---IVHINNQPPIRRGDGP--I 704
++P+PIQ Q P +N++ A TGSGKTLA+ LP I+ + + + +
Sbjct: 147 RQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLL 206
Query: 705 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 884
A+VL PTRELA Q +F Y NT + E+ D++ +I+++TP R++
Sbjct: 207 AVVLEPTRELA---AQTYTEF--LKYCANTSISAANFSGEET-DIQH-ADILVSTPNRIV 259
Query: 885 DFLEKGTTNLQRCTYLVLDEADRMLDM 965
L+K T+ R +LV+DE+DR+ ++
Sbjct: 260 FHLDKIDTSSLR--WLVVDESDRLFEV 284
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 68.5 bits (160), Expect = 9e-12
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 6/158 (3%)
Frame = +3
Query: 537 YKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 716
YK T +Q ++ ++V + TGSGKTLA++LP + I N G AL+L
Sbjct: 29 YKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIG--ALIL 86
Query: 717 APTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE-RGVEIVIATPGRLIDFL 893
+P+REL QI V F + V GG + + + + V I++ATPGRL +
Sbjct: 87 SPSRELCSQIVSVIQPFAEKLNLTVETVTGGQKVDKNIKMFKNKNVNILVATPGRLFQII 146
Query: 894 EKGTTNLQR----CTYLVLDEADRMLDMGL-NHNQKII 992
+ T + R LV+DEADR ++ +H ++I+
Sbjct: 147 QHEKTLIARKMRTLQLLVIDEADRFNEIQFEDHMREIL 184
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 63.7 bits (148), Expect = 3e-10
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 5/149 (3%)
Frame = +3
Query: 528 TMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 701
TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L + I+ P
Sbjct: 226 TMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMC-----P 280
Query: 702 IALVLAPTRELAQQIQQVAADFGH--TSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 875
+ LAPT ELA+QI +V G + + + GG + R L +IVI TPG
Sbjct: 281 QCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRGRKLTE--QIVIGTPG 338
Query: 876 RLIDFLEK-GTTNLQRCTYLVLDEADRML 959
D+L+K + + LVLDEAD M+
Sbjct: 339 ITRDYLQKYKCIDPSKIRCLVLDEADVMI 367
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 63.7 bits (148), Expect = 3e-10
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 5/149 (3%)
Frame = +3
Query: 528 TMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 701
TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L + I+ P
Sbjct: 251 TMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMC-----P 305
Query: 702 IALVLAPTRELAQQIQQVAADFGH--TSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 875
+ LAPT ELA+QI +V G + + + GG + R L +IVI TPG
Sbjct: 306 QCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRGRKLTE--QIVIGTPG 363
Query: 876 RLIDFLEK-GTTNLQRCTYLVLDEADRML 959
D+L+K + + LVLDEAD M+
Sbjct: 364 ITRDYLQKYKCIDPSKIRCLVLDEADVMI 392
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 63.7 bits (148), Expect = 3e-10
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 5/149 (3%)
Frame = +3
Query: 528 TMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 701
TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L + I+ P
Sbjct: 635 TMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMC-----P 689
Query: 702 IALVLAPTRELAQQIQQVAADFGH--TSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 875
+ LAPT ELA+QI +V G + + + GG + R L +IVI TPG
Sbjct: 690 QCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRGRKLTE--QIVIGTPG 747
Query: 876 RLIDFLEK-GTTNLQRCTYLVLDEADRML 959
D+L+K + + LVLDEAD M+
Sbjct: 748 ITRDYLQKYKCIDPSKIRCLVLDEADVMI 776
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 56.0 bits (129), Expect = 5e-08
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Frame = +3
Query: 573 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 752
P + +++ A TGSGKT+ Y+LP + + ++P A++L P + L QI
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQIVD 206
Query: 753 VAADFGHTSYVRNTCVFGGAPKRE-QARDLERG-VEIVIATPGRLIDFLEK---GTTNLQ 917
+ S V GA E +AR L +++ATP RL+ L +L
Sbjct: 207 EFKRWNDESGVAKVVSLSGANDFEKEARQLASDPPNVIVATPARLVQHLTSKIPPPIDLS 266
Query: 918 RCTYLVLDEADRM 956
+ +L++DEADRM
Sbjct: 267 KLRFLIVDEADRM 279
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 54.0 bits (124), Expect = 2e-07
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +3
Query: 699 PIALVLAPTRELAQQIQQVAADFGH---TSYVRNTCVFGGAPKREQARDLERGVEIVIAT 869
P+ ++L PTREL QQ Q F + +R + G + R LE G +IV+ T
Sbjct: 282 PLCVILEPTRELVQQTFQNIQTFASVLDSPKIRCVTLAAGENMNQILRTLETGCDIVVGT 341
Query: 870 PGRLIDFLEKGTTNLQRCTYLVLDEADRML 959
P R+ D + G + ++V+DE D+ L
Sbjct: 342 PSRVFDLIHTGKLATKNLQFVVIDEIDQFL 371
Score = 35.5 bits (78), Expect = 0.082
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 528 TMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 650
++ + PT +Q++ P + G + + A+TGSGKT A+ LP
Sbjct: 19 SLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLP 59
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 50.8 bits (116), Expect = 2e-06
Identities = 43/165 (26%), Positives = 75/165 (45%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 713
G+++P+ IQ +GK++ +Q GSGKT+ ++ + I+ + + ++
Sbjct: 15 GFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQ-----VIL 69
Query: 714 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL 893
LAP R +AQ+ + G V TC+ + + ++ +++ TP DFL
Sbjct: 70 LAPQRGMAQRAHEQLKSLGRNLNVNATCL-----GFDTTAENDKISHVLMGTPK---DFL 121
Query: 894 EKGTTNLQRCTYLVLDEADRMLDMGLNHNQKIIEQYAXXXIDVXV 1028
++ R VLDEAD ML G +I E + DV V
Sbjct: 122 SNIPSDTSRIKMFVLDEADEMLSKGF--KDQIYEVFRSMPQDVQV 164
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 47.6 bits (108), Expect = 2e-05
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Frame = +3
Query: 648 PAIVHINNQPPIRRGDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 818
P + ++ +P + DG P A+++APT+EL QI ++ +
Sbjct: 77 PQVDEMDFEPEHKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINE 136
Query: 819 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 968
E + LE +V+ TPG+L+ +YLV+DEAD +L G
Sbjct: 137 EENSVWLEDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFG 186
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 40.7 bits (91), Expect = 0.002
Identities = 42/149 (28%), Positives = 62/149 (41%), Gaps = 13/149 (8%)
Frame = +3
Query: 555 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI--NNQPPIRRG--DGPIALVLAP 722
+Q + G+ LV A TG GKT A+++PAI N Q P L++A
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKPSPSILIMAS 78
Query: 723 TRELAQQIQQVAADFGHTSYVRN-TCVFGGAPKREQARD-------LERG-VEIVIATPG 875
T L Q+ F + C+ P R+ D +G +I T G
Sbjct: 79 TSALVDQL------FNRCELILGLQCMDNVEPIRDIKIDKLVANHPFTKGQCDIAFCTIG 132
Query: 876 RLIDFLEKGTTNLQRCTYLVLDEADRMLD 962
+L +E G L ++LDEAD+M+D
Sbjct: 133 KLKATIECGDVCLDNLKTIILDEADKMID 161
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 39.9 bits (89), Expect = 0.004
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 13/149 (8%)
Frame = +3
Query: 555 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI-VHINNQPP---IRRGDGPIALVLAP 722
+Q + G+ LV A TG GKT A+++PAI + N+ P L++A
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALKNRQSNCFEYTKPSPSILIMAS 178
Query: 723 TRELAQQIQQVAADFGHTSYVRN-TCVFGGAPKREQARD-------LERG-VEIVIATPG 875
T L Q+ F + C+ P R+ D +G +I T G
Sbjct: 179 TSALVDQL------FNRCELILGLQCMDNVEPIRDIKIDKLVANHPFTKGQCDIAFCTIG 232
Query: 876 RLIDFLEKGTTNLQRCTYLVLDEADRMLD 962
+L +E G L ++LDEAD+M+D
Sbjct: 233 KLKATIECGDVCLDNLKTIILDEADKMID 261
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 39.9 bits (89), Expect = 0.004
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Frame = +3
Query: 591 KNLVGVAQTGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVA 758
+ L+ A TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 130 RGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQLFNRC 189
Query: 759 ------ADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 920
D +R+ + + +D +I T G+L +E T L
Sbjct: 190 EVLLGLIDMEDIIPIRDIKIEKLVASYQFTKD---QCDIAFCTMGKLKASIEDKTILLDN 246
Query: 921 CTYLVLDEADRMLDM 965
++LDE+D+M+D+
Sbjct: 247 LKMMILDESDKMIDI 261
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 38.7 bits (86), Expect = 0.009
Identities = 28/113 (24%), Positives = 55/113 (48%)
Frame = +3
Query: 576 IAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 755
+A+ GKN + A TGSGKT+ I I+ + + G AL + P + QQ
Sbjct: 303 VALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMTPNSMILN--QQA 358
Query: 756 AADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 914
A+ + +V +T + G+ R++ + ++++ATP +++ + +L
Sbjct: 359 ASISSYLDHVYHTQIIQGS-DNVPTRNVIQSKDLIVATPQMIVNLCNEHRNSL 410
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 38.7 bits (86), Expect = 0.009
Identities = 28/113 (24%), Positives = 55/113 (48%)
Frame = +3
Query: 576 IAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 755
+A+ GKN + A TGSGKT+ I I+ + + G AL + P + QQ
Sbjct: 303 VALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMTPNSMILN--QQA 358
Query: 756 AADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 914
A+ + +V +T + G+ R++ + ++++ATP +++ + +L
Sbjct: 359 ASISSYLDHVYHTQIIQGS-DNVPTRNVIQSKDLIVATPQMIVNLCNEHRNSL 410
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 35.1 bits (77), Expect = 0.11
Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Frame = +3
Query: 579 AMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 758
A+ GKN V VA TGSGKT I A+ HI + +G ++L P L Q +
Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKHIEER--TSQGKPSRVVLLVPKIPLVGQQKDRF 439
Query: 759 ADFGHTSYVRNTCVFGGAPKREQA---RDLERGVEIVIATPGRLIDFLEKGTTN 911
+ + Y N F G+ RD + + TP LI+ L+ N
Sbjct: 440 LKYCNGMYEVNG--FHGSESSVSGTGRRDEVIATHVSVMTPQILINMLQSVRQN 491
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 33.5 bits (73), Expect = 0.33
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Frame = +3
Query: 534 GYKEPTPIQAQGW-PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 710
G+K PIQ Q + + S +N++ A GSGKT L + H N P + A+
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENTPEAK------AV 1371
Query: 711 VLAPTRELAQQIQQVAADFGH--TSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 878
+ P ++A +V AD+ + +T V + + +RG +++I+TP R
Sbjct: 1372 YITPMEDMA---TKVYADWKRRLEPAIGHTIVLLTGEQTMDLKLAQRG-QLIISTPER 1425
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 552 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 659
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 124
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 552 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 659
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 147
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 7.1
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 615 TGSGKTLAYILPAIVH 662
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis
zeste white 10 (drosophila) homolog protein 1 protein.
Length = 778
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 748 SKLLQILDTHLMFVTRVCLVVLLKESK 828
+KLL LDT +FVTR C ++ K +K
Sbjct: 372 AKLLFTLDTDTIFVTRRCFAIVSKANK 398
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 29.1 bits (62), Expect = 7.1
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
Frame = +3
Query: 591 KNLVGVAQTGSGKT-LAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 767
KN + TGSGKT +A +L + P+ +G V+ + QQ +
Sbjct: 27 KNTIVQLGTGSGKTFIAVLLLKEYGVQLFAPLDQGGKRAFFVVEKVNLVEQQAIHIEV-- 84
Query: 768 GHTSY----VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 935
HTS+ V G +EQ + +V+ T L+D + ++ L+
Sbjct: 85 -HTSFKVGQVHGQTSSGLWDSKEQCDQFMKRHHVVVITAQCLLDLIRHAYLKIEDMCVLI 143
Query: 936 LDEADRML 959
DE L
Sbjct: 144 FDECHHAL 151
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 28.7 bits (61), Expect = 9.4
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +3
Query: 534 GYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 710
GYK IQ++ A+ K +L+ A TG+GKT +L + I N DG + L
Sbjct: 273 GYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVGLLTMLQEIGNH---LAEDGSVKL 329
Query: 711 ------VLAPTRELAQQI 746
+APT+ L Q++
Sbjct: 330 EEFKIVYIAPTKSLVQEM 347
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,049,741
Number of Sequences: 27780
Number of extensions: 396623
Number of successful extensions: 1140
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3589453552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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