Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_C06.2
(1308 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D9AA39 Cluster: PREDICTED: similar to Histone H2... 46 0.002
UniRef50_UPI00015B604D Cluster: PREDICTED: similar to histone H2... 46 0.002
UniRef50_A7SHX4 Cluster: Predicted protein; n=9; Nematostella ve... 46 0.002
UniRef50_Q4SU60 Cluster: Histone H2A; n=2; Tetraodontidae|Rep: H... 46 0.003
UniRef50_A7TAM8 Cluster: Predicted protein; n=12; Nematostella v... 45 0.004
UniRef50_Q8N257 Cluster: Histone H2B type 3-B; n=159; Eukaryota|... 45 0.005
UniRef50_UPI000155C04A Cluster: PREDICTED: similar to histone H2... 44 0.009
UniRef50_Q99877 Cluster: Histone H2B type 1-N; n=436; Eukaryota|... 44 0.009
UniRef50_UPI0000EBE317 Cluster: PREDICTED: similar to histone H2... 42 0.027
UniRef50_UPI0000EBCEA8 Cluster: PREDICTED: similar to histone H2... 42 0.047
UniRef50_UPI0000588C02 Cluster: PREDICTED: similar to histone H2... 42 0.047
UniRef50_UPI00015B4641 Cluster: PREDICTED: similar to histone H2... 41 0.062
UniRef50_UPI0000EBE8F6 Cluster: PREDICTED: similar to histone H2... 41 0.062
UniRef50_UPI0000EBD7A2 Cluster: PREDICTED: hypothetical protein;... 41 0.062
UniRef50_UPI0000EBCE6E Cluster: PREDICTED: hypothetical protein;... 41 0.062
UniRef50_Q4TE47 Cluster: Histone H2B; n=2; Euteleostomi|Rep: His... 41 0.062
UniRef50_UPI00005BD4F3 Cluster: PREDICTED: similar to histone H2... 40 0.14
UniRef50_UPI00005BD4EF Cluster: PREDICTED: hypothetical protein;... 40 0.14
UniRef50_UPI0000EBC243 Cluster: PREDICTED: similar to histone H2... 40 0.19
UniRef50_A7NZ59 Cluster: Chromosome chr6 scaffold_3, whole genom... 38 0.76
UniRef50_O23629 Cluster: Histone H2B.6; n=12; Eukaryota|Rep: His... 38 0.76
UniRef50_P49120 Cluster: Histone H2B.4; n=18; Eukaryota|Rep: His... 38 0.76
UniRef50_Q43261 Cluster: Histone H2B.3; n=36; Eukaryota|Rep: His... 38 0.76
UniRef50_Q4Q8P9 Cluster: Histone H2B variant; n=8; Trypanosomati... 35 4.1
>UniRef50_UPI0000D9AA39 Cluster: PREDICTED: similar to Histone H2B;
n=2; Eutheria|Rep: PREDICTED: similar to Histone H2B -
Macaca mulatta
Length = 181
Score = 46.4 bits (105), Expect = 0.002
Identities = 37/93 (39%), Positives = 44/93 (47%)
Frame = +1
Query: 286 YAXYCYXVLXQXXPXHRLVEXKPXXIMYXFVXRTSSXRXRCSKLLVSPXTTSVRRITSXX 465
Y+ Y Y VL Q P + K IM FV R C ++ + +TS
Sbjct: 93 YSMYIYKVLKQVHPDIG-ISAKAMSIMNSFVNDVFE-RLACEAARLAQYSGRTT-LTSRE 149
Query: 466 VQXFSXXCCYRVXLAKHAVSEGTKAVTKYTXSK 564
VQ + LAKHAVSEGTKAVTKYT SK
Sbjct: 150 VQT-AVRLLLPGELAKHAVSEGTKAVTKYTSSK 181
>UniRef50_UPI00015B604D Cluster: PREDICTED: similar to histone H2B;
n=4; Nasonia vitripennis|Rep: PREDICTED: similar to
histone H2B - Nasonia vitripennis
Length = 300
Score = 46.0 bits (104), Expect = 0.002
Identities = 39/93 (41%), Positives = 42/93 (45%)
Frame = +1
Query: 286 YAXYCYXVLXQXXPXHRLVEXKPXXIMYXFVXRTSSXRXRCSKLLVSPXTTSVRRITSXX 465
YA Y Y VL Q P V K IM FV + L S ITS
Sbjct: 212 YAIYIYKVLKQVHPDTG-VSSKAMSIMNSFVNDIFERIAAEASRLAHYNKRST--ITSRE 268
Query: 466 VQXFSXXCCYRVXLAKHAVSEGTKAVTKYTXSK 564
+Q + LAKHAVSEGTKAVTKYT SK
Sbjct: 269 IQT-AVRLLLPGELAKHAVSEGTKAVTKYTSSK 300
>UniRef50_A7SHX4 Cluster: Predicted protein; n=9; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 222
Score = 46.0 bits (104), Expect = 0.002
Identities = 38/93 (40%), Positives = 42/93 (45%)
Frame = +1
Query: 286 YAXYCYXVLXQXXPXHRLVEXKPXXIMYXFVXRTSSXRXRCSKLLVSPXTTSVRRITSXX 465
YA Y Y VL Q P + K IM FV + L S ITS
Sbjct: 134 YAIYIYKVLKQVHPDTG-ISSKAMGIMNSFVNDIFERMAGEASRLAHYNKKST--ITSRE 190
Query: 466 VQXFSXXCCYRVXLAKHAVSEGTKAVTKYTXSK 564
+Q + LAKHAVSEGTKAVTKYT SK
Sbjct: 191 IQT-AVRLLLPGELAKHAVSEGTKAVTKYTSSK 222
>UniRef50_Q4SU60 Cluster: Histone H2A; n=2; Tetraodontidae|Rep:
Histone H2A - Tetraodon nigroviridis (Green puffer)
Length = 258
Score = 45.6 bits (103), Expect = 0.003
Identities = 38/93 (40%), Positives = 42/93 (45%)
Frame = +1
Query: 286 YAXYCYXVLXQXXPXHRLVEXKPXXIMYXFVXRTSSXRXRCSKLLVSPXTTSVRRITSXX 465
YA Y Y VL Q P + K IM FV + L S ITS
Sbjct: 170 YAIYVYKVLKQVHPDTG-ISSKAMSIMNSFVNDIFERIASEASRLAHYNKRST--ITSRE 226
Query: 466 VQXFSXXCCYRVXLAKHAVSEGTKAVTKYTXSK 564
+Q + LAKHAVSEGTKAVTKYT SK
Sbjct: 227 IQT-AVRLLLPGELAKHAVSEGTKAVTKYTSSK 258
>UniRef50_A7TAM8 Cluster: Predicted protein; n=12; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 235
Score = 45.2 bits (102), Expect = 0.004
Identities = 38/93 (40%), Positives = 42/93 (45%)
Frame = +1
Query: 286 YAXYCYXVLXQXXPXHRLVEXKPXXIMYXFVXRTSSXRXRCSKLLVSPXTTSVRRITSXX 465
YA Y Y VL Q P + K IM FV S L S I+S
Sbjct: 147 YAIYIYKVLKQVHPDTG-ISSKAMGIMNSFVNDIFERIAAESSRLAHYNKKST--ISSRE 203
Query: 466 VQXFSXXCCYRVXLAKHAVSEGTKAVTKYTXSK 564
+Q + LAKHAVSEGTKAVTKYT SK
Sbjct: 204 IQT-AIRLLLPGELAKHAVSEGTKAVTKYTSSK 235
>UniRef50_Q8N257 Cluster: Histone H2B type 3-B; n=159;
Eukaryota|Rep: Histone H2B type 3-B - Homo sapiens
(Human)
Length = 126
Score = 44.8 bits (101), Expect = 0.005
Identities = 38/93 (40%), Positives = 42/93 (45%)
Frame = +1
Query: 286 YAXYCYXVLXQXXPXHRLVEXKPXXIMYXFVXRTSSXRXRCSKLLVSPXTTSVRRITSXX 465
Y+ Y Y VL Q P + K IM FV + L S ITS
Sbjct: 38 YSIYVYKVLKQVHPDTG-ISSKAMGIMNSFVNDIFERIASEASRLAHYNKRST--ITSRE 94
Query: 466 VQXFSXXCCYRVXLAKHAVSEGTKAVTKYTXSK 564
VQ + LAKHAVSEGTKAVTKYT SK
Sbjct: 95 VQT-AVRLLLPGELAKHAVSEGTKAVTKYTSSK 126
>UniRef50_UPI000155C04A Cluster: PREDICTED: similar to histone H2B;
n=2; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
histone H2B - Ornithorhynchus anatinus
Length = 266
Score = 44.0 bits (99), Expect = 0.009
Identities = 37/93 (39%), Positives = 42/93 (45%)
Frame = +1
Query: 286 YAXYCYXVLXQXXPXHRLVEXKPXXIMYXFVXRTSSXRXRCSKLLVSPXTTSVRRITSXX 465
Y+ Y Y VL Q P + K IM FV + L S ITS
Sbjct: 178 YSIYVYKVLKQVHPDTG-ISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRST--ITSRE 234
Query: 466 VQXFSXXCCYRVXLAKHAVSEGTKAVTKYTXSK 564
+Q + LAKHAVSEGTKAVTKYT SK
Sbjct: 235 IQT-AVRLLLPGELAKHAVSEGTKAVTKYTSSK 266
>UniRef50_Q99877 Cluster: Histone H2B type 1-N; n=436;
Eukaryota|Rep: Histone H2B type 1-N - Homo sapiens
(Human)
Length = 126
Score = 44.0 bits (99), Expect = 0.009
Identities = 37/93 (39%), Positives = 42/93 (45%)
Frame = +1
Query: 286 YAXYCYXVLXQXXPXHRLVEXKPXXIMYXFVXRTSSXRXRCSKLLVSPXTTSVRRITSXX 465
Y+ Y Y VL Q P + K IM FV + L S ITS
Sbjct: 38 YSVYVYKVLKQVHPDTG-ISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRST--ITSRE 94
Query: 466 VQXFSXXCCYRVXLAKHAVSEGTKAVTKYTXSK 564
+Q + LAKHAVSEGTKAVTKYT SK
Sbjct: 95 IQT-AVRLLLPGELAKHAVSEGTKAVTKYTSSK 126
>UniRef50_UPI0000EBE317 Cluster: PREDICTED: similar to histone H2B;
n=2; Bos taurus|Rep: PREDICTED: similar to histone H2B -
Bos taurus
Length = 327
Score = 42.3 bits (95), Expect = 0.027
Identities = 36/93 (38%), Positives = 42/93 (45%)
Frame = +1
Query: 286 YAXYCYXVLXQXXPXHRLVEXKPXXIMYXFVXRTSSXRXRCSKLLVSPXTTSVRRITSXX 465
Y+ Y Y VL + P + K IM FV + L S ITS
Sbjct: 239 YSVYLYKVLKKVHPDTG-ISSKAMGIMNSFVNDLFQGIAGEASRLAHYNKRST--ITSRE 295
Query: 466 VQXFSXXCCYRVXLAKHAVSEGTKAVTKYTXSK 564
+Q + LAKHAVSEGTKAVTKYT SK
Sbjct: 296 IQT-ALRLLLPGELAKHAVSEGTKAVTKYTSSK 327
>UniRef50_UPI0000EBCEA8 Cluster: PREDICTED: similar to histone H2B;
n=2; Bos taurus|Rep: PREDICTED: similar to histone H2B -
Bos taurus
Length = 213
Score = 41.5 bits (93), Expect = 0.047
Identities = 36/93 (38%), Positives = 42/93 (45%)
Frame = +1
Query: 286 YAXYCYXVLXQXXPXHRLVEXKPXXIMYXFVXRTSSXRXRCSKLLVSPXTTSVRRITSXX 465
Y+ Y Y VL Q P + K IM FV + L S ITS
Sbjct: 125 YSVYMYKVLKQVHPDTG-ISSKAMDIMNSFVNDIFERIAGEASHLAHYNKRST--ITSRD 181
Query: 466 VQXFSXXCCYRVXLAKHAVSEGTKAVTKYTXSK 564
+Q S LAKHA+SEGTKAVTK+T SK
Sbjct: 182 IQT-SVRLLLPGELAKHAMSEGTKAVTKHTSSK 213
>UniRef50_UPI0000588C02 Cluster: PREDICTED: similar to histone H2B
(aa 1-123); n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to histone H2B (aa 1-123) -
Strongylocentrotus purpuratus
Length = 238
Score = 41.5 bits (93), Expect = 0.047
Identities = 34/93 (36%), Positives = 42/93 (45%)
Frame = +1
Query: 286 YAXYCYXVLXQXXPXHRLVEXKPXXIMYXFVXRTSSXRXRCSKLLVSPXTTSVRRITSXX 465
Y Y Y VL Q P + + IM F+ S L S I+S
Sbjct: 150 YGIYIYKVLKQVHPDTS-ISSRAMIIMNSFMNDIFEQIAVESSRLAQHNKKST--ISSRE 206
Query: 466 VQXFSXXCCYRVXLAKHAVSEGTKAVTKYTXSK 564
+Q + + LAKHAVSEG+KAVTKYT SK
Sbjct: 207 IQT-AVRLIFPRELAKHAVSEGSKAVTKYTTSK 238
>UniRef50_UPI00015B4641 Cluster: PREDICTED: similar to histone H2B,
partial; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to histone H2B, partial - Nasonia vitripennis
Length = 276
Score = 41.1 bits (92), Expect = 0.062
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +1
Query: 505 LAKHAVSEGTKAVTKYTXSK 564
LAKHAVSEGTKAVTKYT SK
Sbjct: 257 LAKHAVSEGTKAVTKYTSSK 276
>UniRef50_UPI0000EBE8F6 Cluster: PREDICTED: similar to histone H2B;
n=1; Bos taurus|Rep: PREDICTED: similar to histone H2B -
Bos taurus
Length = 202
Score = 41.1 bits (92), Expect = 0.062
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +1
Query: 505 LAKHAVSEGTKAVTKYTXSK 564
LAKHAVSEGTKAVTKYT SK
Sbjct: 183 LAKHAVSEGTKAVTKYTSSK 202
>UniRef50_UPI0000EBD7A2 Cluster: PREDICTED: hypothetical protein;
n=2; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 248
Score = 41.1 bits (92), Expect = 0.062
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +1
Query: 505 LAKHAVSEGTKAVTKYTXSK 564
LAKHAVSEGTKAVTKYT SK
Sbjct: 229 LAKHAVSEGTKAVTKYTSSK 248
>UniRef50_UPI0000EBCE6E Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 212
Score = 41.1 bits (92), Expect = 0.062
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +1
Query: 505 LAKHAVSEGTKAVTKYTXSK 564
LAKHAVSEGTKAVTKYT SK
Sbjct: 193 LAKHAVSEGTKAVTKYTSSK 212
>UniRef50_Q4TE47 Cluster: Histone H2B; n=2; Euteleostomi|Rep:
Histone H2B - Tetraodon nigroviridis (Green puffer)
Length = 81
Score = 41.1 bits (92), Expect = 0.062
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +1
Query: 505 LAKHAVSEGTKAVTKYTXSK 564
LAKHAVSEGTKAVTKYT SK
Sbjct: 62 LAKHAVSEGTKAVTKYTSSK 81
>UniRef50_UPI00005BD4F3 Cluster: PREDICTED: similar to histone
H2b-616; n=2; Bos taurus|Rep: PREDICTED: similar to
histone H2b-616 - Bos taurus
Length = 257
Score = 39.9 bits (89), Expect = 0.14
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +1
Query: 505 LAKHAVSEGTKAVTKYTXSK 564
LAKH+VSEGTKAVTKYT SK
Sbjct: 238 LAKHSVSEGTKAVTKYTSSK 257
>UniRef50_UPI00005BD4EF Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 245
Score = 39.9 bits (89), Expect = 0.14
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +1
Query: 505 LAKHAVSEGTKAVTKYTXSK 564
LAKHA+SEGTKAVTKYT SK
Sbjct: 226 LAKHAMSEGTKAVTKYTSSK 245
>UniRef50_UPI0000EBC243 Cluster: PREDICTED: similar to histone H2B;
n=1; Bos taurus|Rep: PREDICTED: similar to histone H2B -
Bos taurus
Length = 134
Score = 39.5 bits (88), Expect = 0.19
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +1
Query: 505 LAKHAVSEGTKAVTKYTXSK 564
LAKHAVS+GTKAVTKYT SK
Sbjct: 115 LAKHAVSKGTKAVTKYTSSK 134
>UniRef50_A7NZ59 Cluster: Chromosome chr6 scaffold_3, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_3, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 210
Score = 37.5 bits (83), Expect = 0.76
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +1
Query: 505 LAKHAVSEGTKAVTKYTXS 561
LAKHAVSEGTKAVTK+T S
Sbjct: 192 LAKHAVSEGTKAVTKFTSS 210
>UniRef50_O23629 Cluster: Histone H2B.6; n=12; Eukaryota|Rep:
Histone H2B.6 - Arabidopsis thaliana (Mouse-ear cress)
Length = 150
Score = 37.5 bits (83), Expect = 0.76
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +1
Query: 505 LAKHAVSEGTKAVTKYTXS 561
LAKHAVSEGTKAVTK+T S
Sbjct: 132 LAKHAVSEGTKAVTKFTSS 150
>UniRef50_P49120 Cluster: Histone H2B.4; n=18; Eukaryota|Rep:
Histone H2B.4 - Zea mays (Maize)
Length = 137
Score = 37.5 bits (83), Expect = 0.76
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +1
Query: 505 LAKHAVSEGTKAVTKYTXS 561
LAKHAVSEGTKAVTK+T S
Sbjct: 119 LAKHAVSEGTKAVTKFTSS 137
>UniRef50_Q43261 Cluster: Histone H2B.3; n=36; Eukaryota|Rep:
Histone H2B.3 - Zea mays (Maize)
Length = 153
Score = 37.5 bits (83), Expect = 0.76
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +1
Query: 505 LAKHAVSEGTKAVTKYTXS 561
LAKHAVSEGTKAVTK+T S
Sbjct: 135 LAKHAVSEGTKAVTKFTSS 153
>UniRef50_Q4Q8P9 Cluster: Histone H2B variant; n=8;
Trypanosomatidae|Rep: Histone H2B variant - Leishmania
major
Length = 142
Score = 35.1 bits (77), Expect = 4.1
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +1
Query: 442 VRRITSXXVQXFSXXCCYRVXLAKHAVSEGTKAVTKYTXSK 564
V+ +T+ +Q S LAKHA+SEGTKAV KY S+
Sbjct: 94 VKTLTAREIQT-SARLLLPPELAKHAMSEGTKAVAKYNASR 133
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,217,726
Number of Sequences: 1657284
Number of extensions: 6459533
Number of successful extensions: 9878
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 9703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9867
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 134439003988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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