Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_C06.2
         (1308 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    24   3.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    24   3.4  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   5.9  

>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 682 ALKRAFCRCKCNRNTHT 632
           A K   C+C C R T+T
Sbjct: 72  AFKSIICKCFCKRRTNT 88


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 682 ALKRAFCRCKCNRNTHT 632
           A K   C+C C R T+T
Sbjct: 520 AFKSIICKCFCKRRTNT 536


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 9/34 (26%), Positives = 14/34 (41%)
 Frame = -3

Query: 667 FCRCKCNRNTHTNSVRSCISFVSLK*LPKFMKKV 566
           +CR  C    H  S+R+            F++KV
Sbjct: 212 YCRLYCYAQKHVKSIRAVTKLPDTSMAKSFVRKV 245


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,679
Number of Sequences: 438
Number of extensions: 1966
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 45023625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)