Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_C04.2
(1370 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 38 0.013
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 38 0.013
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.20
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.20
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.20
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 33 0.36
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 32 1.1
AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical ... 31 1.9
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 31 2.5
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 31 2.5
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 31 2.5
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 25 4.3
Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical pr... 29 5.8
AL033514-20|CAA22086.1| 169|Caenorhabditis elegans Hypothetical... 29 7.7
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 7.7
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 24 9.5
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 38.3 bits (85), Expect = 0.013
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +3
Query: 1149 PPPPPPGVFXXXGGGXVXPXPPXFXVF*GGAAPP 1250
PPPPPP F G G + P PP + GG PP
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 350
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 1149 PPPPPPGVFXXXGGGXVXPXPPXFXVF*GGAAPP 1250
PPPPPPG+ GG P PP + G PP
Sbjct: 334 PPPPPPGM--RYPGGMPPPPPPRYPSAGPGMYPP 365
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 38.3 bits (85), Expect = 0.013
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +3
Query: 1149 PPPPPPGVFXXXGGGXVXPXPPXFXVF*GGAAPP 1250
PPPPPP F G G + P PP + GG PP
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 360
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 1149 PPPPPPGVFXXXGGGXVXPXPPXFXVF*GGAAPP 1250
PPPPPPG+ GG P PP + G PP
Sbjct: 344 PPPPPPGM--RYPGGMPPPPPPRYPSAGPGMYPP 375
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.20
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = +3
Query: 1149 PPPPPPGVFXXXGGGXVXPXPPXFXVF*GGAAPP 1250
PPPPPPG GG P PP GG PP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPP-----GGCPPP 771
Score = 33.5 bits (73), Expect = 0.36
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +3
Query: 1149 PPPPPPGVFXXXGGGXVXPXPP-XFXVF*GGAAPP 1250
PPPPPPG GG P PP GG PP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Score = 31.5 bits (68), Expect = 1.4
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +3
Query: 1152 PPPPPGVFXXXGGGXVXPXPPXFXVF*GGAAPP 1250
PPPPPG+ GG P P GG PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 745
Score = 30.3 bits (65), Expect = 3.3
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = +3
Query: 1149 PPPPPPGVFXXXGGGXVXPXPPXFXVF*GGAAPP 1250
PPPPPP GG P PP F GG PP
Sbjct: 758 PPPPPP----PPGGCPPPPPPPPPGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.20
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = +3
Query: 1149 PPPPPPGVFXXXGGGXVXPXPPXFXVF*GGAAPP 1250
PPPPPPG GG P PP GG PP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPP-----GGCPPP 771
Score = 33.5 bits (73), Expect = 0.36
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +3
Query: 1149 PPPPPPGVFXXXGGGXVXPXPP-XFXVF*GGAAPP 1250
PPPPPPG GG P PP GG PP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Score = 31.5 bits (68), Expect = 1.4
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +3
Query: 1152 PPPPPGVFXXXGGGXVXPXPPXFXVF*GGAAPP 1250
PPPPPG+ GG P P GG PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 745
Score = 30.3 bits (65), Expect = 3.3
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = +3
Query: 1149 PPPPPPGVFXXXGGGXVXPXPPXFXVF*GGAAPP 1250
PPPPPP GG P PP F GG PP
Sbjct: 758 PPPPPP----PPGGCPPPPPPPPPGGFKGGPPPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.20
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = +3
Query: 1149 PPPPPPGVFXXXGGGXVXPXPPXFXVF*GGAAPP 1250
PPPPPPG GG P PP GG PP
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPP-----GGCPPP 354
Score = 33.5 bits (73), Expect = 0.36
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +3
Query: 1149 PPPPPPGVFXXXGGGXVXPXPP-XFXVF*GGAAPP 1250
PPPPPPG GG P PP GG PP
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 344
Score = 31.5 bits (68), Expect = 1.4
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +3
Query: 1152 PPPPPGVFXXXGGGXVXPXPPXFXVF*GGAAPP 1250
PPPPPG+ GG P P GG PP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 328
Score = 30.3 bits (65), Expect = 3.3
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = +3
Query: 1149 PPPPPPGVFXXXGGGXVXPXPPXFXVF*GGAAPP 1250
PPPPPP GG P PP F GG PP
Sbjct: 341 PPPPPP----PPGGCPPPPPPPPPGGFKGGPPPP 370
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical protein
F15B9.4 protein.
Length = 1140
Score = 33.5 bits (73), Expect = 0.36
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +3
Query: 1149 PPPPPPGVFXXXGGGXVXPXPPXFXVF*GGAAPP 1250
PPPP PG+ G P PP + GG PP
Sbjct: 521 PPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPP 554
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +3
Query: 1149 PPPPPPGVFXXXGGGXVXPXPPXFXVF*GGAA 1244
PPPPPP GGG PP + GG A
Sbjct: 31 PPPPPPACGCGGGGGGYAAPPPAYAAPAGGYA 62
>AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical
protein Y52B11A.5 protein.
Length = 219
Score = 31.1 bits (67), Expect = 1.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 1105 FFXXGGGRXPPXXXXPPPPPPG 1170
++ G GR PP PPPPP G
Sbjct: 21 YYGGGKGRPPPARPPPPPPPRG 42
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical protein
ZK180.5a protein.
Length = 542
Score = 30.7 bits (66), Expect = 2.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 1149 PPPPPPGVFXXXGGGXVXP 1205
PPPPPP F GGG P
Sbjct: 66 PPPPPPPAFGGLGGGAAYP 84
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical protein
ZK180.5b protein.
Length = 497
Score = 30.7 bits (66), Expect = 2.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 1149 PPPPPPGVFXXXGGGXVXP 1205
PPPPPP F GGG P
Sbjct: 66 PPPPPPPAFGGLGGGAAYP 84
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical protein
ZK180.5c protein.
Length = 399
Score = 30.7 bits (66), Expect = 2.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 1149 PPPPPPGVFXXXGGGXVXP 1205
PPPPPP F GGG P
Sbjct: 66 PPPPPPPAFGGLGGGAAYP 84
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 25.0 bits (52), Expect(2) = 4.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 1132 PPXXXXPPPPPP 1167
PP PPPPPP
Sbjct: 57 PPPPMCPPPPPP 68
Score = 23.4 bits (48), Expect(2) = 4.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 1150 PPPPPPGC 1173
PPPPPP C
Sbjct: 67 PPPPPPMC 74
>Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical protein
T07C4.9b protein.
Length = 455
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -1
Query: 1250 GXGXPPLKXXKXGRGGXHXPSPXXXKHPGGGGG 1152
G G PP +GG P +PGG GG
Sbjct: 45 GGGQPPYPGSNSNQGGGGYPGQGGAPYPGGSGG 77
>Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical protein
T07C4.9a protein.
Length = 497
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -1
Query: 1250 GXGXPPLKXXKXGRGGXHXPSPXXXKHPGGGGG 1152
G G PP +GG P +PGG GG
Sbjct: 87 GGGQPPYPGSNSNQGGGGYPGQGGAPYPGGSGG 119
>AL033514-20|CAA22086.1| 169|Caenorhabditis elegans Hypothetical
protein Y75B8A.20 protein.
Length = 169
Score = 29.1 bits (62), Expect = 7.7
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1
Query: 1105 FFXXGGGRXPPXXXXPPPPPPGCF 1176
FF G G PP PPPPP CF
Sbjct: 21 FFNGGCGCQPPPICLPPPPPM-CF 43
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +3
Query: 1149 PPPPPPGVFXXXGGGXVXPXPPXFXVF*GGAAPP 1250
PPPPPP + G P PP + GG PP
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPML--GGPPPP 592
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical protein
ZC168.5 protein.
Length = 172
Score = 23.8 bits (49), Expect(2) = 9.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 1150 PPPPPPGC 1173
PPPPPP C
Sbjct: 40 PPPPPPPC 47
Score = 23.4 bits (48), Expect(2) = 9.5
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +1
Query: 1120 GGRXPPXXXXPPPPPP 1167
G + P PPPPPP
Sbjct: 29 GPQRPQQCCCPPPPPP 44
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,098,639
Number of Sequences: 27780
Number of extensions: 190917
Number of successful extensions: 5158
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3454
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3871284216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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