Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_C03.2
         (1294 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   0.014
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   1.1  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   1.1  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    24   1.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   1.8  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   2.1  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 27.1 bits (57), Expect(2) = 0.014
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -3

Query: 407 PPPPPPPPXXKXS 369
           PPPPPPPP    S
Sbjct: 783 PPPPPPPPPSSLS 795



 Score = 25.0 bits (52), Expect(2) = 0.014
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 425 FXXXLXPPPPPPPP 384
           F   +  PPPPPPP
Sbjct: 776 FADGIGSPPPPPPP 789



 Score = 25.0 bits (52), Expect = 4.8
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -2

Query: 405 PPPPPPPXEXXFXXXPXP 352
           PPPPPPP        P P
Sbjct: 785 PPPPPPPSSLSPGGVPRP 802



 Score = 24.6 bits (51), Expect = 6.3
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -1

Query: 406 PPPPPPPLXXXXXPXPXP 353
           PPPPPPP      P   P
Sbjct: 783 PPPPPPPPPSSLSPGGVP 800



 Score = 24.2 bits (50), Expect = 8.4
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -3

Query: 401 PPPPPPXXKXSXXPPXXP 348
           PPPPPP    S  P   P
Sbjct: 783 PPPPPPPPPSSLSPGGVP 800



 Score = 24.2 bits (50), Expect = 8.4
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -3

Query: 407 PPPPPPPPXXKXSXXP 360
           PPPPPPP        P
Sbjct: 785 PPPPPPPSSLSPGGVP 800


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.6 bits (51), Expect = 6.3
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +3

Query: 339 GXKRXGXGXGXXFXXRGGGGGGG 407
           G +  G G G      GGGGGGG
Sbjct: 544 GPEYEGAGRGGVGSGIGGGGGGG 566



 Score = 23.8 bits (49), Expect(2) = 1.1
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +3

Query: 354 GXGXGXXFXXRGGGGGGG 407
           G G G      GGGGGGG
Sbjct: 292 GGGVGGGGGGGGGGGGGG 309



 Score = 21.4 bits (43), Expect(2) = 1.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 387 GGGGGGGXQXXXKQ 428
           GGGGGGG     +Q
Sbjct: 304 GGGGGGGSAGPVQQ 317


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect(2) = 1.1
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +3

Query: 354 GXGXGXXFXXRGGGGGGG 407
           G G G      GGGGGGG
Sbjct: 292 GGGVGGGGGGGGGGGGGG 309



 Score = 21.4 bits (43), Expect(2) = 1.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 387 GGGGGGGXQXXXKQ 428
           GGGGGGG     +Q
Sbjct: 304 GGGGGGGSAGPVQQ 317


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.8 bits (49), Expect(2) = 1.2
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +3

Query: 354 GXGXGXXFXXRGGGGGGG 407
           G G G      GGGGGGG
Sbjct: 244 GGGVGGGGGGGGGGGGGG 261



 Score = 21.4 bits (43), Expect(2) = 1.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 387 GGGGGGGXQXXXKQ 428
           GGGGGGG     +Q
Sbjct: 256 GGGGGGGSAGPVQQ 269


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.6 bits (46), Expect(2) = 1.8
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 387 GGGGGGGXQ 413
           GGGGGGG Q
Sbjct: 250 GGGGGGGMQ 258



 Score = 21.8 bits (44), Expect(2) = 1.8
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = +3

Query: 339 GXKRXGXGXGXXFXXRGGGGGGG 407
           G    G G        GGGGGGG
Sbjct: 209 GGAPGGGGGSSGGPGPGGGGGGG 231


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -3

Query: 413 LXPPPPPPPPXXKXSXXPPXXP 348
           L PPPPPPP     +  P   P
Sbjct: 528 LGPPPPPPPGGAVLNIPPQFLP 549


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 341,360
Number of Sequences: 2352
Number of extensions: 4309
Number of successful extensions: 172
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 148783908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)