Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_C02.2
         (1235 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6WHF5 Cluster: Fibritin neck whiskers; n=1; Vibrio pha...    36   2.8  
UniRef50_Q55GN1 Cluster: Putative uncharacterized protein; n=1; ...    35   5.0  

>UniRef50_Q6WHF5 Cluster: Fibritin neck whiskers; n=1; Vibrio phage
           KVP40|Rep: Fibritin neck whiskers - Bacteriophage KVP40
          Length = 559

 Score = 35.5 bits (78), Expect = 2.8
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = +2

Query: 485 VNDSEDSSSVRTEYTLLDDADRDLEQDESTQNIINESLELVSTL*TTCGRISL-ETLCGV 661
           + DS+D+   RT Y  LDDA+  +  + S  N++ + +E  +T      R+S  ET    
Sbjct: 243 IGDSQDADPARTIYLRLDDAESAISDNSSDINLLQQEIETPTT--GLIVRVSANETAISD 300

Query: 662 ASTSVIAN 685
             T + AN
Sbjct: 301 GQTQITAN 308


>UniRef50_Q55GN1 Cluster: Putative uncharacterized protein; n=1;
            Dictyostelium discoideum AX4|Rep: Putative
            uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1712

 Score = 34.7 bits (76), Expect = 5.0
 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
 Frame = +2

Query: 398  TNESRTDSAYDSARSSPARVCHATVTYFNVNDSEDSSSVRTEYTLL----DDADRDLEQD 565
            TN S TDSA   A  S + +  + +    VND+ + S+  + Y ++    DD   DL  D
Sbjct: 841  TNVSVTDSASYIANDSVSDIT-SDIENHRVNDTSNDSANDSAYNMIKNDHDDTINDLMND 899

Query: 566  ESTQNIINES 595
            ++T ++IN S
Sbjct: 900  DTTNDMINNS 909


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 741,196,006
Number of Sequences: 1657284
Number of extensions: 10714632
Number of successful extensions: 26711
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26700
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 124720521772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)