Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_C02.2
         (1235 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z84574-8|CAE54891.1|  921|Caenorhabditis elegans Hypothetical pr...    31   1.3  
Z84574-7|CAB06544.3|  928|Caenorhabditis elegans Hypothetical pr...    31   1.3  
AL022593-4|CAE54889.1|  921|Caenorhabditis elegans Hypothetical ...    31   1.3  
AL022593-3|CAA18635.3|  928|Caenorhabditis elegans Hypothetical ...    31   1.3  
AF067936-3|AAC19216.2|  922|Caenorhabditis elegans Hypothetical ...    29   5.1  

>Z84574-8|CAE54891.1|  921|Caenorhabditis elegans Hypothetical
           protein F33E2.2b protein.
          Length = 921

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = +2

Query: 425 YDSARSSPARVCHAT-VTYFNVNDSEDSSSVRTEYTLLDDADRD-LEQDEST-QNIINES 595
           Y S  ++ +  CH   V   N ND + +SS+ +  +  DDAD +  E+DE    NI+N S
Sbjct: 776 YTSPITTYSNPCHVELVDEENANDVDLTSSMDSRRSRSDDADVESSEEDEGNGNNILNTS 835

Query: 596 LE 601
           +E
Sbjct: 836 ME 837


>Z84574-7|CAB06544.3|  928|Caenorhabditis elegans Hypothetical
           protein F33E2.2a protein.
          Length = 928

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = +2

Query: 425 YDSARSSPARVCHAT-VTYFNVNDSEDSSSVRTEYTLLDDADRD-LEQDEST-QNIINES 595
           Y S  ++ +  CH   V   N ND + +SS+ +  +  DDAD +  E+DE    NI+N S
Sbjct: 783 YTSPITTYSNPCHVELVDEENANDVDLTSSMDSRRSRSDDADVESSEEDEGNGNNILNTS 842

Query: 596 LE 601
           +E
Sbjct: 843 ME 844


>AL022593-4|CAE54889.1|  921|Caenorhabditis elegans Hypothetical
           protein F33E2.2b protein.
          Length = 921

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = +2

Query: 425 YDSARSSPARVCHAT-VTYFNVNDSEDSSSVRTEYTLLDDADRD-LEQDEST-QNIINES 595
           Y S  ++ +  CH   V   N ND + +SS+ +  +  DDAD +  E+DE    NI+N S
Sbjct: 776 YTSPITTYSNPCHVELVDEENANDVDLTSSMDSRRSRSDDADVESSEEDEGNGNNILNTS 835

Query: 596 LE 601
           +E
Sbjct: 836 ME 837


>AL022593-3|CAA18635.3|  928|Caenorhabditis elegans Hypothetical
           protein F33E2.2a protein.
          Length = 928

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = +2

Query: 425 YDSARSSPARVCHAT-VTYFNVNDSEDSSSVRTEYTLLDDADRD-LEQDEST-QNIINES 595
           Y S  ++ +  CH   V   N ND + +SS+ +  +  DDAD +  E+DE    NI+N S
Sbjct: 783 YTSPITTYSNPCHVELVDEENANDVDLTSSMDSRRSRSDDADVESSEEDEGNGNNILNTS 842

Query: 596 LE 601
           +E
Sbjct: 843 ME 844


>AF067936-3|AAC19216.2|  922|Caenorhabditis elegans Hypothetical
           protein C24G6.3 protein.
          Length = 922

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -2

Query: 784 CNHENYEVNQTLKII*YNNGPRLNRKISLIIPMISDNR 671
           C+ E YE    L I+ YN  P   + +SLI P+I   R
Sbjct: 254 CSDEEYEDVLNLLILAYNRFPAQKKNLSLIEPLIGGIR 291


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,146,810
Number of Sequences: 27780
Number of extensions: 256671
Number of successful extensions: 671
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3422502224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)