Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_B24.2
(1189 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0485 - 8808139-8808618 39 0.009
03_02_0484 + 8805053-8805538 39 0.009
03_02_0483 - 8804021-8804485 39 0.009
03_02_0478 + 8775892-8776377 37 0.027
02_02_0077 - 6586638-6587165 37 0.027
04_04_0017 + 22176759-22177406 36 0.047
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 36 0.083
01_01_0229 - 1943473-1943922 35 0.11
01_01_0231 + 1951047-1951499 35 0.14
12_01_0061 + 514798-515967 34 0.25
11_02_0041 - 7669692-7670312 34 0.25
02_05_0494 + 29486960-29487454 33 0.33
01_01_0227 + 1933247-1933699 33 0.58
03_05_0865 - 28365430-28367640 31 1.3
01_01_0599 - 4448290-4448790 31 1.3
02_05_0308 - 27754340-27754634,27755591-27755696,27755781-277558... 30 3.1
01_05_0523 - 22915390-22915901,22916496-22916619,22916708-229168... 30 3.1
05_03_0619 + 16274255-16274396,16274775-16274848,16275111-162761... 30 4.1
05_03_0029 - 7525408-7525634,7526253-7526457 30 4.1
02_05_0444 - 29073740-29073844,29074417-29074725,29077910-290779... 30 4.1
12_02_0643 - 21461123-21461902 29 5.4
01_05_0796 - 25297792-25298514 29 9.5
01_01_0228 + 1940149-1940649 29 9.5
>03_02_0485 - 8808139-8808618
Length = 159
Score = 38.7 bits (86), Expect = 0.009
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +1
Query: 469 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 582
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 111 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 147
>03_02_0484 + 8805053-8805538
Length = 161
Score = 38.7 bits (86), Expect = 0.009
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +1
Query: 469 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 582
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 113 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 149
>03_02_0483 - 8804021-8804485
Length = 154
Score = 38.7 bits (86), Expect = 0.009
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +1
Query: 469 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 582
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 106 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 142
>03_02_0478 + 8775892-8776377
Length = 161
Score = 37.1 bits (82), Expect = 0.027
Identities = 15/36 (41%), Positives = 27/36 (75%)
Frame = +1
Query: 469 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 576
S +F+RR+ LP+ A PE +++ + +GVLT+T P++
Sbjct: 113 SGKFLRRFRLPDNAKPEQIKASM-ENGVLTVTVPKE 147
>02_02_0077 - 6586638-6587165
Length = 175
Score = 37.1 bits (82), Expect = 0.027
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +1
Query: 475 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTG 627
+F+RR+ LPE A + V + DGVLT+T +K P K R V + G
Sbjct: 117 KFMRRFPLPESADLDGVRAEYK-DGVLTVTVDKKPPPEPKKPRVVEVKVAG 166
>04_04_0017 + 22176759-22177406
Length = 215
Score = 36.3 bits (80), Expect = 0.047
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +1
Query: 475 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTG 627
+F R+ LP+ A +++ + L + GVLT+ + PD +KG R V IA G
Sbjct: 141 RFWRQLRLPDNADLDSIAASLDN-GVLTVRFRKLAPDQIKGPRVVGIASAG 190
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 35.5 bits (78), Expect = 0.083
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +1
Query: 469 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 573
S QF+RR+ LPE A + V++ L +GVLT+T P+
Sbjct: 102 SGQFMRRFRLPENAKVDQVKAGL-ENGVLTVTVPK 135
>01_01_0229 - 1943473-1943922
Length = 149
Score = 35.1 bits (77), Expect = 0.11
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 469 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 573
S QF+RR+ LPE A + V++ + +GVLT+T P+
Sbjct: 101 SGQFMRRFRLPENAKVDQVKASM-ENGVLTVTVPK 134
>01_01_0231 + 1951047-1951499
Length = 150
Score = 34.7 bits (76), Expect = 0.14
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 469 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 573
S QF+RR+ LPE A + V++ + +GVLT+T P+
Sbjct: 102 SGQFMRRFRLPENAKVDQVKAGM-ENGVLTVTVPK 135
>12_01_0061 + 514798-515967
Length = 389
Score = 33.9 bits (74), Expect = 0.25
Identities = 22/51 (43%), Positives = 26/51 (50%)
Frame = -3
Query: 671 SWVPSLWSLISLRTGPVCAMGTFLSPLTASGTFLGAVMVRTPSDDSRDSTV 519
SW PS +LISL +G CA F S + A+ FL SDD D TV
Sbjct: 295 SWSPSKLNLISLGSGRFCAAKIFRSNMPAAAAFL------DDSDDDDDYTV 339
>11_02_0041 - 7669692-7670312
Length = 206
Score = 33.9 bits (74), Expect = 0.25
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +1
Query: 475 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 582
+F RR+ +P GA V +RL DGVLT+T P KVP
Sbjct: 141 RFWRRFRMPPGADVGRVAARLD-DGVLTVTVP-KVP 174
>02_05_0494 + 29486960-29487454
Length = 164
Score = 33.5 bits (73), Expect = 0.33
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 472 RQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 576
R V ++ LPE AA + +R++ DGVLT+T P++
Sbjct: 106 RAAVTQFRLPEDAAADEASARMA-DGVLTVTVPKR 139
>01_01_0227 + 1933247-1933699
Length = 150
Score = 32.7 bits (71), Expect = 0.58
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1
Query: 469 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 576
S +F RR+ LP GA + V + + +GVLT+T P++
Sbjct: 102 SGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKE 136
>03_05_0865 - 28365430-28367640
Length = 736
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 573 EGTRRRQGREKGAHRTDRSRSQGDQGPERGN 665
+ +RR + RE+G DR R +GD+ ERG+
Sbjct: 114 DSSRRDRDRERGDRDRDRDRERGDRDRERGD 144
>01_01_0599 - 4448290-4448790
Length = 166
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +1
Query: 475 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 615
+F+R++ LP+ A + + S + DGVLT+T + P K + + +
Sbjct: 118 KFMRKFVLPDNADVDKI-SAVCQDGVLTVTVEKLPPPEPKKPKTIEV 163
>02_05_0308 -
27754340-27754634,27755591-27755696,27755781-27755855,
27756039-27757410
Length = 615
Score = 30.3 bits (65), Expect = 3.1
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -3
Query: 404 VFTEISSGEKCCTSRLTWNLSLSAFMLEPRSRD 306
+F ++S GE+C ++ T+N+ +SA + R+ D
Sbjct: 401 LFEKMSKGEECLPNQDTYNIIISAMFMRKRAED 433
>01_05_0523 -
22915390-22915901,22916496-22916619,22916708-22916844,
22917383-22917518,22917614-22917951,22919426-22919663
Length = 494
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 564 RAEEGTRRRQGREKGAHRTDRSRSQGDQGPERG 662
R EEG RRR+G+ KGA + + D P G
Sbjct: 8 REEEGRRRRKGKGKGAGEMVLQQEEEDAAPAMG 40
>05_03_0619 +
16274255-16274396,16274775-16274848,16275111-16276139,
16276484-16276702,16277228-16277250,16277482-16277606,
16279480-16279670,16280202-16280360,16281359-16281598
Length = 733
Score = 29.9 bits (64), Expect = 4.1
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = -1
Query: 526 PQSQAPRLQAARNVGRTA-LKYTRARLSSLRACLPP--RCTRRQSSPKSLPARSAARPD* 356
P+ Q P + R ++ RA + + C+ P R R L A +A+
Sbjct: 598 PRKQMPEFETTRYFNLAGFVEQLRALAAEVGYCITPEYRVVRNFEDKGVLEALWSAKSSP 657
Query: 355 LGTCPCRPL 329
GTCP RPL
Sbjct: 658 YGTCPSRPL 666
>05_03_0029 - 7525408-7525634,7526253-7526457
Length = 143
Score = 29.9 bits (64), Expect = 4.1
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Frame = -2
Query: 411 VGSLHRNLFRREVLHVQIDLELVLVGL---YAGAEVTRCSRELSPRSEVVFGEHWTGDGS 241
V S R R + +IDL+L G Y EV R RE R FG GDG+
Sbjct: 11 VDSRERKKLRNQSKPPRIDLQLRSHGQARSYVRHEVARRKRERR-RDGYTFGSDSNGDGA 69
Query: 240 QHVVRG*RQSEILINKTTGPVVVTNAG 160
VR R + +L+ G +TN+G
Sbjct: 70 NGSVRVERWAPVLVPAMRG---MTNSG 93
>02_05_0444 -
29073740-29073844,29074417-29074725,29077910-29077981,
29078541-29078633,29078825-29078982,29079247-29079415,
29080204-29081241,29081632-29081759,29081926-29081985,
29082033-29083077
Length = 1058
Score = 29.9 bits (64), Expect = 4.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 594 GREKGAHRTDRSRSQGDQGPERGNPGC 674
GR R R + QG++G ERG GC
Sbjct: 73 GRTTTTRRRRRRKQQGEEGEERGERGC 99
>12_02_0643 - 21461123-21461902
Length = 259
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 554 SPSPRRGRYPTPSRERERCPSHRPVPF 634
SPSP RGR TP R R P+ P P+
Sbjct: 211 SPSPLRGRPRTPPPPRPRPPTTPPRPY 237
>01_05_0796 - 25297792-25298514
Length = 240
Score = 28.7 bits (61), Expect = 9.5
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = -1
Query: 526 PQSQAPRLQAARNVGRTALKYTRARLSSLRACLPPRCTRRQSSPKSLPARSA 371
P APR + VGR + TRA LR RC RR+ S S A A
Sbjct: 130 PARAAPRRSRSEKVGR-GRRPTRAASPELRRSESERCRRRRRSLSSSSASLA 180
>01_01_0228 + 1940149-1940649
Length = 166
Score = 28.7 bits (61), Expect = 9.5
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +1
Query: 478 FVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGER 603
+V R LP G E V + VL IT R V KG+R
Sbjct: 52 YVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQR 93
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,360,422
Number of Sequences: 37544
Number of extensions: 512759
Number of successful extensions: 1981
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1972
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3619931772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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