Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_B23.2
(1295 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 55 1e-09
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 55 1e-09
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 55 1e-09
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 36 5e-04
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 54.8 bits (126), Expect = 1e-09
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = +2
Query: 224 QQRLIFAGXQLXAGRTLSASNIQQASTLHLVLSLXGG 334
QQRLIFAG QL GRTLS NIQ+ STLHLVL L GG
Sbjct: 40 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 27.1 bits (57), Expect = 0.31
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 154 VXASXTLXXVKAQIQAKXGLPP 219
V S T+ VKA+IQ K G+PP
Sbjct: 17 VEPSDTIENVKAKIQDKEGIPP 38
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 54.8 bits (126), Expect = 1e-09
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = +2
Query: 224 QQRLIFAGXQLXAGRTLSASNIQQASTLHLVLSLXGG 334
QQRLIFAG QL GRTLS NIQ+ STLHLVL L GG
Sbjct: 40 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 54.8 bits (126), Expect = 1e-09
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = +2
Query: 224 QQRLIFAGXQLXAGRTLSASNIQQASTLHLVLSLXGG 334
QQRLIFAG QL GRTLS NIQ+ STLHLVL L GG
Sbjct: 116 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 54.8 bits (126), Expect = 1e-09
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = +2
Query: 224 QQRLIFAGXQLXAGRTLSASNIQQASTLHLVLSLXGG 334
QQRLIFAG QL GRTLS NIQ+ STLHLVL L GG
Sbjct: 192 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 54.8 bits (126), Expect = 1e-09
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = +2
Query: 224 QQRLIFAGXQLXAGRTLSASNIQQASTLHLVLSLXGG 334
QQRLIFAG QL GRTLS NIQ+ STLHLVL L GG
Sbjct: 268 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 54.8 bits (126), Expect = 1e-09
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = +2
Query: 224 QQRLIFAGXQLXAGRTLSASNIQQASTLHLVLSLXGG 334
QQRLIFAG QL GRTLS NIQ+ STLHLVL L GG
Sbjct: 344 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 54.8 bits (126), Expect = 1e-09
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = +2
Query: 224 QQRLIFAGXQLXAGRTLSASNIQQASTLHLVLSLXGG 334
QQRLIFAG QL GRTLS NIQ+ STLHLVL L GG
Sbjct: 496 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 54.8 bits (126), Expect = 1e-09
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = +2
Query: 224 QQRLIFAGXQLXAGRTLSASNIQQASTLHLVLSLXGG 334
QQRLIFAG QL GRTLS NIQ+ STLHLVL L GG
Sbjct: 572 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
Score = 54.8 bits (126), Expect = 1e-09
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = +2
Query: 224 QQRLIFAGXQLXAGRTLSASNIQQASTLHLVLSLXGG 334
QQRLIFAG QL GRTLS NIQ+ STLHLVL L GG
Sbjct: 648 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684
Score = 52.4 bits (120), Expect = 7e-09
Identities = 27/37 (72%), Positives = 28/37 (75%)
Frame = +2
Query: 224 QQRLIFAGXQLXAGRTLSASNIQQASTLHLVLSLXGG 334
QQR IFAG QL GRTLS NIQ+ STLHLVL L GG
Sbjct: 420 QQRSIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 27.1 bits (57), Expect = 0.31
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 154 VXASXTLXXVKAQIQAKXGLPP 219
V S T+ VKA+IQ K G+PP
Sbjct: 17 VEPSDTIENVKAKIQDKEGIPP 38
Score = 27.1 bits (57), Expect = 0.31
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 154 VXASXTLXXVKAQIQAKXGLPP 219
V S T+ VKA+IQ K G+PP
Sbjct: 93 VEPSDTIENVKAKIQDKEGIPP 114
Score = 27.1 bits (57), Expect = 0.31
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 154 VXASXTLXXVKAQIQAKXGLPP 219
V S T+ VKA+IQ K G+PP
Sbjct: 169 VEPSDTIENVKAKIQDKEGIPP 190
Score = 27.1 bits (57), Expect = 0.31
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 154 VXASXTLXXVKAQIQAKXGLPP 219
V S T+ VKA+IQ K G+PP
Sbjct: 245 VEPSDTIENVKAKIQDKEGIPP 266
Score = 27.1 bits (57), Expect = 0.31
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 154 VXASXTLXXVKAQIQAKXGLPP 219
V S T+ VKA+IQ K G+PP
Sbjct: 321 VEPSDTIENVKAKIQDKEGIPP 342
Score = 27.1 bits (57), Expect = 0.31
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 154 VXASXTLXXVKAQIQAKXGLPP 219
V S T+ VKA+IQ K G+PP
Sbjct: 397 VEPSDTIENVKAKIQDKEGIPP 418
Score = 27.1 bits (57), Expect = 0.31
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 154 VXASXTLXXVKAQIQAKXGLPP 219
V S T+ VKA+IQ K G+PP
Sbjct: 473 VEPSDTIENVKAKIQDKEGIPP 494
Score = 27.1 bits (57), Expect = 0.31
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 154 VXASXTLXXVKAQIQAKXGLPP 219
V S T+ VKA+IQ K G+PP
Sbjct: 549 VEPSDTIENVKAKIQDKEGIPP 570
Score = 27.1 bits (57), Expect = 0.31
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 154 VXASXTLXXVKAQIQAKXGLPP 219
V S T+ VKA+IQ K G+PP
Sbjct: 625 VEPSDTIENVKAKIQDKEGIPP 646
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 54.8 bits (126), Expect = 1e-09
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = +2
Query: 224 QQRLIFAGXQLXAGRTLSASNIQQASTLHLVLSLXGG 334
QQRLIFAG QL GRTLS NIQ+ STLHLVL L GG
Sbjct: 12 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 48
Score = 33.9 bits (74), Expect = 0.003
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +2
Query: 224 QQRLIFAGXQLXAGRTLSASNIQQ 295
QQR IFAG QL GRTLS NIQ+
Sbjct: 88 QQRSIFAGKQLEDGRTLSDYNIQK 111
Score = 27.1 bits (57), Expect = 0.31
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 154 VXASXTLXXVKAQIQAKXGLPP 219
V S T+ VKA+IQ K G+PP
Sbjct: 65 VEPSDTIENVKAKIQDKEGIPP 86
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 36.3 bits (80), Expect = 5e-04
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +2
Query: 224 QQRLIFAGXQLXAGRTLSASNIQQ 295
QQRLIFAG QL GRTLS NIQ+
Sbjct: 40 QQRLIFAGKQLEDGRTLSDYNIQK 63
Score = 27.1 bits (57), Expect = 0.31
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 154 VXASXTLXXVKAQIQAKXGLPP 219
V S T+ VKA+IQ K G+PP
Sbjct: 17 VEPSDTIENVKAKIQDKEGIPP 38
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,185
Number of Sequences: 336
Number of extensions: 3120
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 38227092
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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