BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_B20.2
(1248 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070994-1|AAL48616.1| 262|Drosophila melanogaster RE08669p pro... 237 2e-62
AE014297-4764|AAF57167.1| 262|Drosophila melanogaster CG11522-P... 237 2e-62
AE014297-4763|AAF57166.1| 243|Drosophila melanogaster CG11522-P... 206 5e-53
AY118279-1|AAM48308.1| 427|Drosophila melanogaster AT13296p pro... 30 5.7
AY069159-1|AAL39304.1| 440|Drosophila melanogaster GH18255p pro... 30 5.7
AE014297-798|AAS65126.1| 427|Drosophila melanogaster CG8136-PC,... 30 5.7
AE014297-797|AAN13398.1| 440|Drosophila melanogaster CG8136-PA,... 30 5.7
AE014297-796|AAF54275.2| 441|Drosophila melanogaster CG8136-PB,... 30 5.7
AE013599-2320|AAF57972.2| 1302|Drosophila melanogaster CG18471-P... 30 5.7
AY069391-1|AAL39536.1| 541|Drosophila melanogaster LD09907p pro... 30 7.6
AF257539-1|AAG23063.1| 448|Drosophila melanogaster hexokinase-A... 30 7.6
AF257538-1|AAG23062.1| 448|Drosophila melanogaster hexokinase-A... 30 7.6
AF257537-1|AAG23061.1| 448|Drosophila melanogaster hexokinase-A... 30 7.6
AF257536-1|AAG23060.1| 448|Drosophila melanogaster hexokinase-A... 30 7.6
AF257535-1|AAG23059.1| 448|Drosophila melanogaster hexokinase-A... 30 7.6
AF257534-1|AAG23058.1| 448|Drosophila melanogaster hexokinase-A... 30 7.6
AF257533-1|AAG23057.1| 448|Drosophila melanogaster hexokinase-A... 30 7.6
AF257532-1|AAG23056.1| 448|Drosophila melanogaster hexokinase-A... 30 7.6
AF257531-1|AAG23055.1| 448|Drosophila melanogaster hexokinase-A... 30 7.6
AF257530-1|AAG23054.1| 448|Drosophila melanogaster hexokinase-A... 30 7.6
AF257529-1|AAG23053.1| 448|Drosophila melanogaster hexokinase-A... 30 7.6
AF257528-1|AAG23052.1| 448|Drosophila melanogaster hexokinase-A... 30 7.6
AF257527-1|AAG23051.1| 448|Drosophila melanogaster hexokinase-A... 30 7.6
AF257526-1|AAG23050.1| 448|Drosophila melanogaster hexokinase-A... 30 7.6
AF257525-1|AAG23049.1| 448|Drosophila melanogaster hexokinase-A... 30 7.6
AF257524-1|AAG23048.1| 448|Drosophila melanogaster hexokinase-A... 30 7.6
AF257523-1|AAG23047.1| 448|Drosophila melanogaster hexokinase-A... 30 7.6
AF257522-1|AAG23046.1| 448|Drosophila melanogaster hexokinase-A... 30 7.6
AF200820-1|AAG40470.1| 254|Drosophila melanogaster hexokinase p... 30 7.6
AE014298-1347|AAN09253.1| 448|Drosophila melanogaster CG3001-PB... 30 7.6
AE014298-1346|AAF46507.1| 541|Drosophila melanogaster CG3001-PA... 30 7.6
>AY070994-1|AAL48616.1| 262|Drosophila melanogaster RE08669p
protein.
Length = 262
Score = 237 bits (581), Expect = 2e-62
Identities = 123/245 (50%), Positives = 155/245 (63%)
Frame = +2
Query: 155 PRXSXLGNGVMRFSKSKXFHKQAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVP 334
P S L G++R+SK++ + ++A Y+ VK+IGG KNGG RTV
Sbjct: 21 PVNSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVF 80
Query: 335 LKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPS 514
LK+ K+ YPT+ ++ FS+H R R NL GTV ILLAGRH GKRVVL+ +L S
Sbjct: 81 LKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLAS 140
Query: 515 GLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXX 694
GLLLVTGPFA NSCPLRR+ QRYVI TS+++ LG FK+P+H ND YF
Sbjct: 141 GLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKTGE 200
Query: 695 XEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYP 874
DIFA KKE++VP+EQRK DQK VD A++K I A P+ K YL+ F L SSQYP
Sbjct: 201 A---DIFAAKKERFVPNEQRKKDQKEVDAALLKVIKAHPEGKFFAKYLQNMFALHSSQYP 257
Query: 875 HRLRF 889
HR+RF
Sbjct: 258 HRMRF 262
>AE014297-4764|AAF57167.1| 262|Drosophila melanogaster CG11522-PB,
isoform B protein.
Length = 262
Score = 237 bits (581), Expect = 2e-62
Identities = 123/245 (50%), Positives = 155/245 (63%)
Frame = +2
Query: 155 PRXSXLGNGVMRFSKSKXFHKQAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVP 334
P S L G++R+SK++ + ++A Y+ VK+IGG KNGG RTV
Sbjct: 21 PVNSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVF 80
Query: 335 LKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPS 514
LK+ K+ YPT+ ++ FS+H R R NL GTV ILLAGRH GKRVVL+ +L S
Sbjct: 81 LKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLAS 140
Query: 515 GLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXX 694
GLLLVTGPFA NSCPLRR+ QRYVI TS+++ LG FK+P+H ND YF
Sbjct: 141 GLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKTGE 200
Query: 695 XEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYP 874
DIFA KKE++VP+EQRK DQK VD A++K I A P+ K YL+ F L SSQYP
Sbjct: 201 A---DIFAAKKERFVPNEQRKKDQKEVDAALLKVIKAHPEGKFFAKYLQNMFALHSSQYP 257
Query: 875 HRLRF 889
HR+RF
Sbjct: 258 HRMRF 262
>AE014297-4763|AAF57166.1| 243|Drosophila melanogaster CG11522-PA,
isoform A protein.
Length = 243
Score = 206 bits (503), Expect = 5e-53
Identities = 103/187 (55%), Positives = 126/187 (67%)
Frame = +2
Query: 329 VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 508
VP+K+ K+ YPT+ ++ FS+H R R NL GTV ILLAGRH GKRVVL+ +L
Sbjct: 60 VPIKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVL 119
Query: 509 PSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXX 688
SGLLLVTGPFA NSCPLRR+ QRYVI TS+++ LG FK+P+H ND YF
Sbjct: 120 ASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKT 179
Query: 689 XXXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQ 868
DIFA KKE++VP+EQRK DQK VD A++K I A P+ K YL+ F L SSQ
Sbjct: 180 GEA---DIFAAKKERFVPNEQRKKDQKEVDAALLKVIKAHPEGKFFAKYLQNMFALHSSQ 236
Query: 869 YPHRLRF 889
YPHR+RF
Sbjct: 237 YPHRMRF 243
>AY118279-1|AAM48308.1| 427|Drosophila melanogaster AT13296p
protein.
Length = 427
Score = 30.3 bits (65), Expect = 5.7
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +3
Query: 597 PPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSA 755
P + H+ + NCQ + + ++ SA+N Q + SLPQ RN+ H SSA
Sbjct: 42 PTKGHTTSENCQLPAQELETK---SATNEQGALGIMSVSLPQTTRNS-HQSSA 90
>AY069159-1|AAL39304.1| 440|Drosophila melanogaster GH18255p
protein.
Length = 440
Score = 30.3 bits (65), Expect = 5.7
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +3
Query: 597 PPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSA 755
P + H+ + NCQ + + ++ SA+N Q + SLPQ RN+ H SSA
Sbjct: 55 PTKGHTTSENCQLPAQELETK---SATNEQGALGIMSVSLPQTTRNS-HQSSA 103
>AE014297-798|AAS65126.1| 427|Drosophila melanogaster CG8136-PC,
isoform C protein.
Length = 427
Score = 30.3 bits (65), Expect = 5.7
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +3
Query: 597 PPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSA 755
P + H+ + NCQ + + ++ SA+N Q + SLPQ RN+ H SSA
Sbjct: 42 PTKGHTTSENCQLPAQELETK---SATNEQGALGIMSVSLPQTTRNS-HQSSA 90
>AE014297-797|AAN13398.1| 440|Drosophila melanogaster CG8136-PA,
isoform A protein.
Length = 440
Score = 30.3 bits (65), Expect = 5.7
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +3
Query: 597 PPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSA 755
P + H+ + NCQ + + ++ SA+N Q + SLPQ RN+ H SSA
Sbjct: 55 PTKGHTTSENCQLPAQELETK---SATNEQGALGIMSVSLPQTTRNS-HQSSA 103
>AE014297-796|AAF54275.2| 441|Drosophila melanogaster CG8136-PB,
isoform B protein.
Length = 441
Score = 30.3 bits (65), Expect = 5.7
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +3
Query: 597 PPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSA 755
P + H+ + NCQ + + ++ SA+N Q + SLPQ RN+ H SSA
Sbjct: 56 PTKGHTTSENCQLPAQELETK---SATNEQGALGIMSVSLPQTTRNS-HQSSA 104
>AE013599-2320|AAF57972.2| 1302|Drosophila melanogaster CG18471-PA
protein.
Length = 1302
Score = 30.3 bits (65), Expect = 5.7
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Frame = +3
Query: 594 PPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSL-PQKKRNTFHLSSAKPIRR 770
P PE S S+ Q T ++ + ASN + N+ ++ SL Q +R+ L+ P R
Sbjct: 404 PVPESKSPGSSSQKTPTSLSRQGTLRASNRRKNSGQLSISLGTQGRRSPVGLNDRSPQGR 463
Query: 771 QSTRL*S----KPSEP--DPTRRCSADTSRRPS 851
+S S P++P PT R RR S
Sbjct: 464 RSPLFPSSGLRSPNDPMTSPTVRSPTGEPRRSS 496
>AY069391-1|AAL39536.1| 541|Drosophila melanogaster LD09907p
protein.
Length = 541
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 856 ESEGRLEVSAEHLLVGSGSDGFDHSLVDCL 767
+ E R+ +H+++GSG+ FDH + +CL
Sbjct: 177 QMESRIYAIPQHIMIGSGTQLFDH-IAECL 205
>AF257539-1|AAG23063.1| 448|Drosophila melanogaster hexokinase-A
protein.
Length = 448
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 856 ESEGRLEVSAEHLLVGSGSDGFDHSLVDCL 767
+ E R+ +H+++GSG+ FDH + +CL
Sbjct: 84 QMESRIYAIPQHIMIGSGTQLFDH-IAECL 112
>AF257538-1|AAG23062.1| 448|Drosophila melanogaster hexokinase-A
protein.
Length = 448
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 856 ESEGRLEVSAEHLLVGSGSDGFDHSLVDCL 767
+ E R+ +H+++GSG+ FDH + +CL
Sbjct: 84 QMESRIYAIPQHIMIGSGTQLFDH-IAECL 112
>AF257537-1|AAG23061.1| 448|Drosophila melanogaster hexokinase-A
protein.
Length = 448
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 856 ESEGRLEVSAEHLLVGSGSDGFDHSLVDCL 767
+ E R+ +H+++GSG+ FDH + +CL
Sbjct: 84 QMESRIYAIPQHIMIGSGTQLFDH-IAECL 112
>AF257536-1|AAG23060.1| 448|Drosophila melanogaster hexokinase-A
protein.
Length = 448
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 856 ESEGRLEVSAEHLLVGSGSDGFDHSLVDCL 767
+ E R+ +H+++GSG+ FDH + +CL
Sbjct: 84 QMESRIYAIPQHIMIGSGTQLFDH-IAECL 112
>AF257535-1|AAG23059.1| 448|Drosophila melanogaster hexokinase-A
protein.
Length = 448
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 856 ESEGRLEVSAEHLLVGSGSDGFDHSLVDCL 767
+ E R+ +H+++GSG+ FDH + +CL
Sbjct: 84 QMESRIYAIPQHIMIGSGTQLFDH-IAECL 112
>AF257534-1|AAG23058.1| 448|Drosophila melanogaster hexokinase-A
protein.
Length = 448
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 856 ESEGRLEVSAEHLLVGSGSDGFDHSLVDCL 767
+ E R+ +H+++GSG+ FDH + +CL
Sbjct: 84 QMESRIYAIPQHIMIGSGTQLFDH-IAECL 112
>AF257533-1|AAG23057.1| 448|Drosophila melanogaster hexokinase-A
protein.
Length = 448
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 856 ESEGRLEVSAEHLLVGSGSDGFDHSLVDCL 767
+ E R+ +H+++GSG+ FDH + +CL
Sbjct: 84 QMESRIYAIPQHIMIGSGTQLFDH-IAECL 112
>AF257532-1|AAG23056.1| 448|Drosophila melanogaster hexokinase-A
protein.
Length = 448
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 856 ESEGRLEVSAEHLLVGSGSDGFDHSLVDCL 767
+ E R+ +H+++GSG+ FDH + +CL
Sbjct: 84 QMESRIYAIPQHIMIGSGTQLFDH-IAECL 112
>AF257531-1|AAG23055.1| 448|Drosophila melanogaster hexokinase-A
protein.
Length = 448
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 856 ESEGRLEVSAEHLLVGSGSDGFDHSLVDCL 767
+ E R+ +H+++GSG+ FDH + +CL
Sbjct: 84 QMESRIYAIPQHIMIGSGTQLFDH-IAECL 112
>AF257530-1|AAG23054.1| 448|Drosophila melanogaster hexokinase-A
protein.
Length = 448
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 856 ESEGRLEVSAEHLLVGSGSDGFDHSLVDCL 767
+ E R+ +H+++GSG+ FDH + +CL
Sbjct: 84 QMESRIYAIPQHIMIGSGTQLFDH-IAECL 112
>AF257529-1|AAG23053.1| 448|Drosophila melanogaster hexokinase-A
protein.
Length = 448
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 856 ESEGRLEVSAEHLLVGSGSDGFDHSLVDCL 767
+ E R+ +H+++GSG+ FDH + +CL
Sbjct: 84 QMESRIYAIPQHIMIGSGTQLFDH-IAECL 112
>AF257528-1|AAG23052.1| 448|Drosophila melanogaster hexokinase-A
protein.
Length = 448
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 856 ESEGRLEVSAEHLLVGSGSDGFDHSLVDCL 767
+ E R+ +H+++GSG+ FDH + +CL
Sbjct: 84 QMESRIYAIPQHIMIGSGTQLFDH-IAECL 112
>AF257527-1|AAG23051.1| 448|Drosophila melanogaster hexokinase-A
protein.
Length = 448
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 856 ESEGRLEVSAEHLLVGSGSDGFDHSLVDCL 767
+ E R+ +H+++GSG+ FDH + +CL
Sbjct: 84 QMESRIYAIPQHIMIGSGTQLFDH-IAECL 112
>AF257526-1|AAG23050.1| 448|Drosophila melanogaster hexokinase-A
protein.
Length = 448
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 856 ESEGRLEVSAEHLLVGSGSDGFDHSLVDCL 767
+ E R+ +H+++GSG+ FDH + +CL
Sbjct: 84 QMESRIYAIPQHIMIGSGTQLFDH-IAECL 112
>AF257525-1|AAG23049.1| 448|Drosophila melanogaster hexokinase-A
protein.
Length = 448
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 856 ESEGRLEVSAEHLLVGSGSDGFDHSLVDCL 767
+ E R+ +H+++GSG+ FDH + +CL
Sbjct: 84 QMESRIYAIPQHIMIGSGTQLFDH-IAECL 112
>AF257524-1|AAG23048.1| 448|Drosophila melanogaster hexokinase-A
protein.
Length = 448
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 856 ESEGRLEVSAEHLLVGSGSDGFDHSLVDCL 767
+ E R+ +H+++GSG+ FDH + +CL
Sbjct: 84 QMESRIYAIPQHIMIGSGTQLFDH-IAECL 112
>AF257523-1|AAG23047.1| 448|Drosophila melanogaster hexokinase-A
protein.
Length = 448
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 856 ESEGRLEVSAEHLLVGSGSDGFDHSLVDCL 767
+ E R+ +H+++GSG+ FDH + +CL
Sbjct: 84 QMESRIYAIPQHIMIGSGTQLFDH-IAECL 112
>AF257522-1|AAG23046.1| 448|Drosophila melanogaster hexokinase-A
protein.
Length = 448
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 856 ESEGRLEVSAEHLLVGSGSDGFDHSLVDCL 767
+ E R+ +H+++GSG+ FDH + +CL
Sbjct: 84 QMESRIYAIPQHIMIGSGTQLFDH-IAECL 112
>AF200820-1|AAG40470.1| 254|Drosophila melanogaster hexokinase
protein.
Length = 254
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 856 ESEGRLEVSAEHLLVGSGSDGFDHSLVDCL 767
+ E R+ +H+++GSG+ FDH + +CL
Sbjct: 84 QMESRIYAIPQHIMIGSGTQLFDH-IAECL 112
>AE014298-1347|AAN09253.1| 448|Drosophila melanogaster CG3001-PB,
isoform B protein.
Length = 448
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 856 ESEGRLEVSAEHLLVGSGSDGFDHSLVDCL 767
+ E R+ +H+++GSG+ FDH + +CL
Sbjct: 84 QMESRIYAIPQHIMIGSGTQLFDH-IAECL 112
>AE014298-1346|AAF46507.1| 541|Drosophila melanogaster CG3001-PA,
isoform A protein.
Length = 541
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 856 ESEGRLEVSAEHLLVGSGSDGFDHSLVDCL 767
+ E R+ +H+++GSG+ FDH + +CL
Sbjct: 177 QMESRIYAIPQHIMIGSGTQLFDH-IAECL 205
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,324,840
Number of Sequences: 53049
Number of extensions: 875855
Number of successful extensions: 2749
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 2543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2746
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6682378440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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