Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_B19.2
(1261 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0923 + 7296781-7296907,7296991-7297619 41 0.002
02_05_0730 + 31284936-31285085,31285228-31285452,31287058-312872... 40 0.004
12_01_0643 + 5435106-5435651,5437525-5437634,5437891-5438038 38 0.013
01_01_0924 + 7301611-7301737,7301890-7302518 38 0.013
06_03_0422 + 20612886-20613059,20613170-20613589,20613663-206137... 37 0.029
08_01_0335 + 2990687-2990893,2991266-2991685,2991783-2991844,299... 36 0.067
08_01_0334 + 2983306-2983593,2983697-2984116,2984230-2984291,298... 36 0.067
05_02_0084 - 6458177-6458387,6459753-6459814,6461523-6461957 36 0.089
01_01_0724 - 5662323-5662536,5662891-5662952,5663037-5663252,566... 36 0.089
10_08_0476 + 18186127-18186277,18186380-18186627,18186713-18187108 35 0.16
07_03_0684 + 20675947-20676157,20676236-20676336,20676428-206766... 35 0.16
04_02_0032 - 8906691-8906810,8906894-8907034,8907140-8907435,890... 35 0.16
03_06_0770 + 36146919-36147761 35 0.16
06_01_0871 - 6659682-6659937,6660650-6660711,6660824-6661018,666... 34 0.21
05_03_0059 + 7900544-7900673,7900774-7901027,7901949-7902320 34 0.21
09_04_0396 + 17269928-17270344,17270455-17270517,17270635-17270718 34 0.27
02_02_0180 - 7515742-7515964,7517328-7517389,7517573-7517995,751... 33 0.36
01_01_0719 - 5590272-5590485,5590849-5590910,5590990-5591202,559... 33 0.47
07_03_0218 + 15305474-15306082,15306127-15306327,15306442-15306552 32 0.83
01_06_0674 - 31090767-31091087 32 0.83
07_03_0222 + 15352972-15353589,15355476-15355616,15355741-15355854 32 1.1
07_03_0220 + 15323423-15324022,15324118-15324258,15324391-15324501 32 1.1
04_04_1559 - 34428286-34429062 31 1.4
03_02_0173 + 6138406-6138628,6139769-6139857,6139922-6140608,614... 31 1.4
08_01_0333 + 2977397-2977648,2978416-2978784,2980108-2980169,298... 31 1.9
04_04_0535 + 26072774-26073391,26074102-26074242,26074752-26074865 31 1.9
02_05_0028 + 25181440-25181758,25181865-25182160,25183902-251840... 31 1.9
10_08_0615 - 19259402-19259597,19260248-19260735,19264895-19265140 31 2.5
09_06_0124 + 21008773-21009522,21009624-21009746 31 2.5
09_04_0480 + 17958726-17958926,17959294-17959382,17960176-179602... 30 4.4
04_03_0531 + 16817676-16818299 30 4.4
03_05_0938 - 28978696-28978809,28978942-28979028,28979124-289792... 29 5.8
03_05_0488 - 24847076-24847220,24847823-24847872,24848139-248482... 29 5.8
03_05_1094 - 30348366-30348467,30348571-30348753,30348833-303489... 29 7.7
02_05_0304 + 27721413-27721479,27721561-27722208,27722399-277233... 29 7.7
>01_01_0923 + 7296781-7296907,7296991-7297619
Length = 251
Score = 41.1 bits (92), Expect = 0.002
Identities = 27/89 (30%), Positives = 37/89 (41%)
Frame = +2
Query: 647 TPLSSTHTALASGCVVAMLVQGLDHISGAMMNPTVTLAXVVWGRVSAVRAIVMFXXXXXG 826
T + T A A VVA++V H+SG +NP VTL G ++ R+ + G
Sbjct: 51 TIMGLTAVAAAHALVVAVMVSAGLHVSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLG 110
Query: 827 GXXGAXXLXXLVPXGGSXXGCLXVPXPGV 913
L L GG + P PGV
Sbjct: 111 SSLACLLLAALT--GGEEAVPVHAPAPGV 137
>02_05_0730 +
31284936-31285085,31285228-31285452,31287058-31287252,
31287357-31287418,31287768-31288032
Length = 298
Score = 39.9 bits (89), Expect = 0.004
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +2
Query: 653 LSSTHTALASGCVVAMLVQGLDHISGAMMNPTVTLAXVVW 772
+S ++A G +V +++ + HISGA MNP VTLA V+
Sbjct: 79 ISQLGQSIAGGLIVTVMIYAVGHISGAHMNPAVTLAFAVF 118
>12_01_0643 + 5435106-5435651,5437525-5437634,5437891-5438038
Length = 267
Score = 38.3 bits (85), Expect = 0.013
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 671 ALASGCVVAMLVQGLDHISGAMMNPTVTLAXVVWGRV 781
A + G VA+LV L H+SGA +NP V++A +GR+
Sbjct: 111 AASIGLAVAVLVMSLAHVSGAHINPAVSVAMAAFGRL 147
>01_01_0924 + 7301611-7301737,7301890-7302518
Length = 251
Score = 38.3 bits (85), Expect = 0.013
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +2
Query: 662 THTALASGCVVAMLVQGLDHISGAMMNPTVTLAXVVWGRVSAVRAIVMFXXXXXGGXXGA 841
T A+A VVA+L H+SG +NP VTL+ V G ++ R+ + G
Sbjct: 56 TAAAMAQALVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLAC 115
Query: 842 XXLXXL 859
L L
Sbjct: 116 LLLRCL 121
>06_03_0422 +
20612886-20613059,20613170-20613589,20613663-20613724,
20613834-20613999
Length = 273
Score = 37.1 bits (82), Expect = 0.029
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +2
Query: 671 ALASGCVVAMLVQGLDHISGAMMNPTVTLAXVVWGRVSAVRA 796
A+A G V +V + H+SGA +NP VTL V GR RA
Sbjct: 92 AVAWGAAVMAMVYAVGHVSGAHLNPAVTLGFAVAGRFPWRRA 133
>08_01_0335 +
2990687-2990893,2991266-2991685,2991783-2991844,
2991966-2992113
Length = 278
Score = 35.9 bits (79), Expect = 0.067
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 671 ALASGCVVAMLVQGLDHISGAMMNPTVTLAXVVWGRVSAVRAI 799
A ++G V +LV L HISG +NP +++A V+G + + +
Sbjct: 104 ATSAGLAVTVLVLSLIHISGCHLNPAISIAMAVFGHLPSAHLL 146
>08_01_0334 +
2983306-2983593,2983697-2984116,2984230-2984291,
2984525-2984672
Length = 305
Score = 35.9 bits (79), Expect = 0.067
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +2
Query: 671 ALASGCVVAMLVQGLDHISGAMMNPTVTLAXVVWGRV 781
A ++G V +LV L HISG +NP V++A V+G +
Sbjct: 131 ATSAGLAVTVLVLSLIHISGCHLNPAVSIAMTVFGHL 167
>05_02_0084 - 6458177-6458387,6459753-6459814,6461523-6461957
Length = 235
Score = 35.5 bits (78), Expect = 0.089
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 683 GCVVAMLVQGLDHISGAMMNPTVTLAXVVWGR 778
G V ++V + HISGA +NP VTLA GR
Sbjct: 43 GLAVMVMVYSVGHISGAHLNPAVTLAFATCGR 74
>01_01_0724 -
5662323-5662536,5662891-5662952,5663037-5663252,
5664521-5664815,5665808-5665903,5667381-5667540,
5667837-5667903
Length = 369
Score = 35.5 bits (78), Expect = 0.089
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 683 GCVVAMLVQGLDHISGAMMNPTVTLAXVVWGR 778
G VV +LV + HISGA NP VT+A GR
Sbjct: 170 GLVVMVLVYTVSHISGAHFNPAVTVAFATCGR 201
>10_08_0476 + 18186127-18186277,18186380-18186627,18186713-18187108
Length = 264
Score = 34.7 bits (76), Expect = 0.16
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 641 LXTPLSSTHTALASGCVVAMLVQGLDHISGAMMNPTVTLAXVVWGRVSAVRAI 799
+ TP +LA +A+ V +ISG +NP +T ++ GR+S +RA+
Sbjct: 57 MSTPGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRAL 109
>07_03_0684 +
20675947-20676157,20676236-20676336,20676428-20676630,
20677024-20677438
Length = 309
Score = 34.7 bits (76), Expect = 0.16
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 501 ASRCSTAAGAXAPRDCRPTIGRSWRAWPQPRRWAL 605
A CS A +P C + G SW W QP WAL
Sbjct: 236 ADACSWGTAAASPPSCAASTGNSW--WDQPPAWAL 268
>04_02_0032 -
8906691-8906810,8906894-8907034,8907140-8907435,
8907524-8907815
Length = 282
Score = 34.7 bits (76), Expect = 0.16
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +2
Query: 671 ALASGCVVAMLVQGLDHISGAMMNPTVTLAXVVWGRVSAVRAIVMFXXXXXGGXXG 838
A A G ++ +LV ISG +NP VT ++ +VS +RA++ GG G
Sbjct: 79 AWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVG 134
>03_06_0770 + 36146919-36147761
Length = 280
Score = 34.7 bits (76), Expect = 0.16
Identities = 23/57 (40%), Positives = 28/57 (49%)
Frame = +2
Query: 671 ALASGCVVAMLVQGLDHISGAMMNPTVTLAXVVWGRVSAVRAIVMFXXXXXGGXXGA 841
A A G ++ +LV ISG MNP VT A V+ RVS RA + G GA
Sbjct: 73 AWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGA 129
>06_01_0871 -
6659682-6659937,6660650-6660711,6660824-6661018,
6663112-6663336,6663495-6663653
Length = 298
Score = 34.3 bits (75), Expect = 0.21
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 653 LSSTHTALASGCVVAMLVQGLDHISGAMMNPTVTLA 760
+S ++ G +V +++ HISGA MNP VTL+
Sbjct: 82 ISQLGQSVVGGLIVTVMIYATGHISGAHMNPAVTLS 117
>05_03_0059 + 7900544-7900673,7900774-7901027,7901949-7902320
Length = 251
Score = 34.3 bits (75), Expect = 0.21
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2
Query: 671 ALASGCVVAMLVQGLDHISGAMMNPTVTLAXVVWGRVSAVRA 796
A+A+ +LV H+SG +NP VT+A + G ++A R+
Sbjct: 62 AIATALAAGVLVTAGFHVSGGHLNPAVTVALLARGHITAFRS 103
>09_04_0396 + 17269928-17270344,17270455-17270517,17270635-17270718
Length = 187
Score = 33.9 bits (74), Expect = 0.27
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = -2
Query: 558 LSVGSRAVXPHPPRYCSATLGADPMSWH*VMAPLQQRTPGSSSDRIARAGPSVRCR 391
L + RA PHPP + T A W AP P +S R+A P VR R
Sbjct: 19 LPLPRRARRPHPPPAANTTGAASTPDWFRPRAP-PDADPSTSGGRVAARDPGVRVR 73
>02_02_0180 -
7515742-7515964,7517328-7517389,7517573-7517995,
7518090-7518236
Length = 284
Score = 33.5 bits (73), Expect = 0.36
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Frame = +2
Query: 671 ALASGCVVAMLVQGLDHISGAMMNPTVTLAXVV-----WGRVSAVRAIVMFXXXXXGG 829
A+ G V ++V + HISGA NP VTLA W +V A A M G
Sbjct: 84 AIVWGLAVMVMVYAVGHISGAHFNPAVTLAFATCRRFPWRQVPAYAAAQMLGATLAAG 141
>01_01_0719 -
5590272-5590485,5590849-5590910,5590990-5591202,
5591223-5591295,5591664-5591863,5592484-5592633
Length = 303
Score = 33.1 bits (72), Expect = 0.47
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 683 GCVVAMLVQGLDHISGAMMNPTVTLAXVVWG 775
G VV +LV + HISG +NP VT+A G
Sbjct: 89 GLVVTVLVYSVGHISGTHLNPAVTVAFATRG 119
>07_03_0218 + 15305474-15306082,15306127-15306327,15306442-15306552
Length = 306
Score = 32.3 bits (70), Expect = 0.83
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 671 ALASGCVVAMLVQGLDHISGAMMNPTVTLAXVVWGRVSAVRAIVMFXXXXXGGXXG 838
A A G ++ +LV +SG +NP VTL + +VS VRA++ G G
Sbjct: 86 AWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICG 141
>01_06_0674 - 31090767-31091087
Length = 106
Score = 32.3 bits (70), Expect = 0.83
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -1
Query: 586 CGHARQLRPIVGRQSRGAXAPAAVLQRDARCGSHVVALSHG 464
C H R+LRP + R+ R AAV+Q A C HV A S G
Sbjct: 49 CTHQRELRPAISRR-RPVPPGAAVMQLHA-CTRHVAATSLG 87
>07_03_0222 + 15352972-15353589,15355476-15355616,15355741-15355854
Length = 290
Score = 31.9 bits (69), Expect = 1.1
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +2
Query: 671 ALASGCVVAMLVQGLDHISGAMMNPTVTLAXVVWGRVSAVRAIVMFXXXXXGGXXG 838
A A G ++ +LV ISG +NP VT + +VS VRAI+ G G
Sbjct: 89 AWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAICG 144
>07_03_0220 + 15323423-15324022,15324118-15324258,15324391-15324501
Length = 283
Score = 31.9 bits (69), Expect = 1.1
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +2
Query: 671 ALASGCVVAMLVQGLDHISGAMMNPTVTLAXVVWGRVSAVRAIVMFXXXXXGGXXG 838
A A G ++ +LV ISG +NP VT + +VS VRAI+ G G
Sbjct: 83 AWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCG 138
>04_04_1559 - 34428286-34429062
Length = 258
Score = 31.5 bits (68), Expect = 1.4
Identities = 26/97 (26%), Positives = 41/97 (42%)
Frame = -1
Query: 691 NTTAGERSVRGAERRGQTGWKTREQHXQSSAQRLGCGHARQLRPIVGRQSRGAXAPAAVL 512
++ A + RGAERR ++ + R++ ++S H R++R VGR+ A +
Sbjct: 102 SSLAADPCERGAERRRESCERGRDRRIRTSHH-----HPRRIRATVGRRDDRIQARRSEA 156
Query: 511 QRDARCGSHVVALSHGAAAAEDSGLVVGSNSTSWSER 401
R G VA S A + G T S R
Sbjct: 157 AHGIRAGGEGVAGSAPPVADDGGSAREGGRETMGSRR 193
>03_02_0173 +
6138406-6138628,6139769-6139857,6139922-6140608,
6140682-6140834,6140922-6141290
Length = 506
Score = 31.5 bits (68), Expect = 1.4
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Frame = -1
Query: 676 ERSVRGAERRGQTGWKTREQ--HXQS-------SAQRLGCGHARQLRPIVGRQSRGAXAP 524
E +V G RR + W+ R++ H + +AQRLG G A +VG + G AP
Sbjct: 20 EEAVMGLGRRRRAEWQQRKRGAHDPAPPPPGSGAAQRLGKGEAASRDGVVGVKMNGHLAP 79
Query: 523 AAVLQRDARC 494
L +RC
Sbjct: 80 YTFLTVTSRC 89
>08_01_0333 +
2977397-2977648,2978416-2978784,2980108-2980169,
2980271-2980418
Length = 276
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 671 ALASGCVVAMLVQGLDHISGAMMNPTVTLAXVVWGRV 781
A ++G V +V + HISG+ +NP V+LA G +
Sbjct: 119 AASAGLAVVAVVLSVVHISGSHLNPAVSLAMAALGHL 155
>04_04_0535 + 26072774-26073391,26074102-26074242,26074752-26074865
Length = 290
Score = 31.1 bits (67), Expect = 1.9
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 671 ALASGCVVAMLVQGLDHISGAMMNPTVTLAXVVWGRVSAVRAIVMFXXXXXGGXXG 838
A A G ++ +LV +SG +NP VT + +VS VRA++ G G
Sbjct: 89 AWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICG 144
>02_05_0028 +
25181440-25181758,25181865-25182160,25183902-25184042,
25184605-25184715
Length = 288
Score = 31.1 bits (67), Expect = 1.9
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 671 ALASGCVVAMLVQGLDHISGAMMNPTVTLAXVVWGRVSAVRAIVMFXXXXXGGXXG 838
A A G ++ +LV ISG +NP VT + +VS +RA++ G G
Sbjct: 88 AWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICG 143
>10_08_0615 - 19259402-19259597,19260248-19260735,19264895-19265140
Length = 309
Score = 30.7 bits (66), Expect = 2.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 653 LSSTHTALASGCVVAMLVQGLDHISGAMMNPTVTLA 760
+S A +G V ++ HISGA +NP++T+A
Sbjct: 111 ISPFGNAACAGLAVTTIILSTGHISGAHLNPSLTIA 146
>09_06_0124 + 21008773-21009522,21009624-21009746
Length = 290
Score = 30.7 bits (66), Expect = 2.5
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 671 ALASGCVVAMLVQGLDHISGAMMNPTVTLAXVVWGRVSAVRAIVMFXXXXXGGXXGA 841
A + G + +LV +SG +NP VTL ++S VR ++ G GA
Sbjct: 86 AWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGA 142
>09_04_0480 +
17958726-17958926,17959294-17959382,17960176-17960242,
17960329-17960444,17960978-17961044,17961158-17961206,
17961630-17961715,17961825-17962078,17962158-17962213,
17962683-17962768,17963047-17963139,17963790-17964219,
17964338-17964861,17964962-17965190,17965271-17965566
Length = 880
Score = 29.9 bits (64), Expect = 4.4
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 629 FPSCLXTPLSSTHTALASGCVVAMLVQGLDHISGAMMNPTVTLAXVVW 772
FP + +AL GC V +L +G +I M+P+ +A V W
Sbjct: 756 FPDFVDAKFGEEASALLPGCCVVVLWEGHQNIDSIAMDPS-AIAIVCW 802
>04_03_0531 + 16817676-16818299
Length = 207
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = +1
Query: 712 LGSHLGRDDEPDG--DAGXRGVGSG 780
+G H G DD+ DG D+G GVG G
Sbjct: 83 VGCHTGHDDDDDGDDDSGSSGVGGG 107
>03_05_0938 -
28978696-28978809,28978942-28979028,28979124-28979256,
28979592-28979865,28980242-28980368,28980523-28980773,
28980854-28980935
Length = 355
Score = 29.5 bits (63), Expect = 5.8
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = -1
Query: 679 GERSVRGAERRGQTGWKTREQHXQSSAQRLGCGHARQLRPIVGRQSRGAXAPAAVLQRDA 500
G++ V+GAE W R + +A+ L H R PIV R R + A DA
Sbjct: 154 GKKGVKGAEPGPVLTWSQRARIAYGAARGLEYLHERAQPPIVHRDIRSSNA-LVFDGHDA 212
Query: 499 RCGS-HVVALSHGAAAAEDSGLVVGS 425
+ G ++ S +AA S V+G+
Sbjct: 213 KIGDFNLTNQSPDSAARLHSTKVLGT 238
>03_05_0488 -
24847076-24847220,24847823-24847872,24848139-24848278,
24848358-24848493,24848584-24848683,24848837-24848949,
24849034-24849132,24849227-24849311,24849799-24850037,
24850202-24850372,24850544-24850784,24850899-24851172,
24851481-24851660,24852170-24852251,24852336-24852437,
24853315-24853384,24853725-24853824,24853931-24854025,
24854105-24854184,24854361-24854439,24854603-24854663,
24855570-24855984
Length = 1018
Score = 29.5 bits (63), Expect = 5.8
Identities = 34/130 (26%), Positives = 49/130 (37%), Gaps = 2/130 (1%)
Frame = -1
Query: 586 CGHARQLRPIVGRQSR-GAXAPAAVLQRDARCGSHVVALSHGAAAAEDSGLVVGSNSTSW 410
CGH P VG + G P +L A AL +A S GS
Sbjct: 90 CGHTLTAVPAVGEEGTPGYIGPRLILFGGA------TALEGNSATPPSSA---GSAGIRL 140
Query: 409 SERQVSTH*FSHPSHKXRRRQPR-DTVTPSLRHVVTATFSEHGXSGRGHAAGVSSSRDNV 233
+ H + S+K R P+ + +P HV TA + G AG+S+ +V
Sbjct: 141 AGATADVHCYDVLSNKWSRLTPQGEPPSPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHV 200
Query: 232 IDDRRPRRTW 203
+D + R W
Sbjct: 201 LDLTQQRPRW 210
>03_05_1094 -
30348366-30348467,30348571-30348753,30348833-30348934,
30349617-30349967,30350049-30350276,30350353-30350509,
30351189-30351370,30351443-30351866,30351949-30352892,
30353509-30353773,30354558-30355120
Length = 1166
Score = 29.1 bits (62), Expect = 7.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 422 IRSDDEPGVLCCSGAMTQCHDMGSAPSVALQYRGGCGC 535
I DD G + SG M Q H+ P ++++ G C C
Sbjct: 430 IVDDDSYGHIKDSGMMLQDHNEEEKPGLSMKSHGNCSC 467
>02_05_0304 +
27721413-27721479,27721561-27722208,27722399-27723371,
27724196-27724237,27724379-27724466,27724911-27725016,
27726499-27726614
Length = 679
Score = 29.1 bits (62), Expect = 7.7
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -1
Query: 544 SRGAXAPAA--VLQRDARCGSHVVALSHGA 461
SR P A VL DAR GSH+ L+HGA
Sbjct: 236 SRKGTKPVARGVLYHDARGGSHMAYLNHGA 265
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,563,667
Number of Sequences: 37544
Number of extensions: 458342
Number of successful extensions: 1709
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1705
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3899283420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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