Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_B19.2
         (1261 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73905-1|CAA98110.1|  244|Caenorhabditis elegans Hypothetical pr...    41   0.002
Z70754-10|CAA94779.2|  273|Caenorhabditis elegans Hypothetical p...    34   0.24 
Z70753-13|CAA94770.2|  273|Caenorhabditis elegans Hypothetical p...    34   0.24 
Z71185-1|CAA94903.1|  290|Caenorhabditis elegans Hypothetical pr...    31   2.3  
AF003740-2|AAM15562.2|  330|Caenorhabditis elegans Hypothetical ...    31   2.3  
AC006672-7|AAM98004.1|  668|Caenorhabditis elegans Hypothetical ...    31   2.3  
AL034365-7|CAA22259.1|  421|Caenorhabditis elegans Hypothetical ...    30   3.0  

>Z73905-1|CAA98110.1|  244|Caenorhabditis elegans Hypothetical
           protein C32C4.2 protein.
          Length = 244

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 20/67 (29%), Positives = 30/67 (44%)
 Frame = +2

Query: 665 HTALASGCVVAMLVQGLDHISGAMMNPTVTLAXVVWGRVSAVRAIVMFXXXXXGGXXGAX 844
           H A A G  + +L      +SGA +NP VT    + GR+S + A+        G   GA 
Sbjct: 43  HAAFAHGVAIFVLAATFGGVSGAHINPAVTFGIALVGRISPIHAVCYVVSQLLGSVFGAL 102

Query: 845 XLXXLVP 865
            +   +P
Sbjct: 103 LVRISLP 109


>Z70754-10|CAA94779.2|  273|Caenorhabditis elegans Hypothetical
           protein F40F9.9 protein.
          Length = 273

 Score = 33.9 bits (74), Expect = 0.24
 Identities = 19/59 (32%), Positives = 24/59 (40%)
 Frame = +2

Query: 665 HTALASGCVVAMLVQGLDHISGAMMNPTVTLAXVVWGRVSAVRAIVMFXXXXXGGXXGA 841
           H A A G  + +LV    HISG   NP V+ A    G++              GG  GA
Sbjct: 76  HAAFAHGFTIFILVTAFGHISGGHFNPAVSWAIAGAGKMPIFHLPFYVVSQLLGGICGA 134


>Z70753-13|CAA94770.2|  273|Caenorhabditis elegans Hypothetical
           protein F40F9.9 protein.
          Length = 273

 Score = 33.9 bits (74), Expect = 0.24
 Identities = 19/59 (32%), Positives = 24/59 (40%)
 Frame = +2

Query: 665 HTALASGCVVAMLVQGLDHISGAMMNPTVTLAXVVWGRVSAVRAIVMFXXXXXGGXXGA 841
           H A A G  + +LV    HISG   NP V+ A    G++              GG  GA
Sbjct: 76  HAAFAHGFTIFILVTAFGHISGGHFNPAVSWAIAGAGKMPIFHLPFYVVSQLLGGICGA 134


>Z71185-1|CAA94903.1|  290|Caenorhabditis elegans Hypothetical
           protein C35A5.1 protein.
          Length = 290

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 17/63 (26%), Positives = 25/63 (39%)
 Frame = +2

Query: 650 PLSSTHTALASGCVVAMLVQGLDHISGAMMNPTVTLAXVVWGRVSAVRAIVMFXXXXXGG 829
           P+  TH AL  G    +++     ISG   NP V+ A V+  ++              GG
Sbjct: 46  PVGLTHAALTHGLATIVVIAVFGKISGGHFNPVVSWAMVLCQKLHPFELPFYMFSQFFGG 105

Query: 830 XXG 838
             G
Sbjct: 106 FAG 108


>AF003740-2|AAM15562.2|  330|Caenorhabditis elegans Hypothetical
           protein C41D11.4 protein.
          Length = 330

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 24/70 (34%), Positives = 31/70 (44%)
 Frame = -2

Query: 447 TPGSSSDRIARAGPSVRCRLTNFRTLHIRXGAGSRATPSHRHSVTSSQRHLASTAXVGAG 268
           TPGS   R  R+G   R    +   + IR   G+  TP  +   TSS   L S+      
Sbjct: 124 TPGSPVKRYRRSGSMPRLEAQSL-DVPIRMEIGNSLTPVLKRKRTSSLTCLFSSDMPPIL 182

Query: 267 TPRASRPREI 238
           TP+  RPR I
Sbjct: 183 TPQRLRPRGI 192


>AC006672-7|AAM98004.1|  668|Caenorhabditis elegans Hypothetical
           protein K08D12.6 protein.
          Length = 668

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 19/46 (41%), Positives = 23/46 (50%)
 Frame = -1

Query: 529 APAAVLQRDARCGSHVVALSHGAAAAEDSGLVVGSNSTSWSERQVS 392
           APA V   D  CGS   A +  A AA DSG    S   S+ + QV+
Sbjct: 255 APAPVAAPDVECGSAAPAPAAAAPAATDSG--YRSKRNSYGDEQVT 298


>AL034365-7|CAA22259.1|  421|Caenorhabditis elegans Hypothetical
           protein Y69E1A.7 protein.
          Length = 421

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +2

Query: 683 GCVVAMLVQGLDHISGAMMNPTVTLAXVVWGRVSAVRAIVMFXXXXXGGXXGA 841
           G V+ + V     ISGA +NP V+   +  G+++ +R +V       G   GA
Sbjct: 162 GLVLMLAVLMGSKISGAHLNPAVSFFQLTQGKINLIRFLVYAVAQNIGAFLGA 214


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,853,275
Number of Sequences: 27780
Number of extensions: 306684
Number of successful extensions: 873
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3505977888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)