Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_B14.2
         (1316 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...   149   1e-34
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...   112   2e-23
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi...    90   1e-16
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ...    49   3e-04
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE...    42   0.047
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0...    40   0.14 
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h...    36   3.1  

>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score =  149 bits (362), Expect = 1e-34
 Identities = 72/103 (69%), Positives = 73/103 (70%)
 Frame = +3

Query: 663 SKRPETVKRPRCWRFSIGSAPLTSITKIDAQVXGGETRQXYKDTRRFPLXAPSCALXFRP 842
           SK+  T    R  RFSIGSAPLTSITKIDAQV GGETRQ YKDTRRFPL APSCAL FRP
Sbjct: 2   SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61

Query: 843 CRLXDTCPPFSXRXXWXFXIXHAVGXSXXCXSXAXXWXVXXXP 971
           CRL DTCPPFS R  W F I HAVG S  C S A  W V   P
Sbjct: 62  CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNP 104


>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score =  112 bits (269), Expect = 2e-23
 Identities = 64/112 (57%), Positives = 70/112 (62%)
 Frame = +3

Query: 507 VCXXGALPFPRSLTRCARSFGCGXRXQXTQRX*YGYPXNQGITQEXTCEQKASKRPETVK 686
           +C  G +P PRSLTR ARSFGCG R + T           G   E T  +K   + E   
Sbjct: 30  ICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT--RKTLSKEEI-- 77

Query: 687 RPRCWRFSIGSAPLTSITKIDAQVXGGETRQXYKDTRRFPLXAPSCALXFRP 842
           RPR  RFSIGSAPLTSI K DAQ+ GGETRQ YKD RRFPL APSCAL F P
Sbjct: 78  RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLP 129


>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
           organisms|Rep: Predicted protein - Nematostella
           vectensis
          Length = 97

 Score = 90.2 bits (214), Expect = 1e-16
 Identities = 43/54 (79%), Positives = 45/54 (83%)
 Frame = +3

Query: 681 VKRPRCWRFSIGSAPLTSITKIDAQVXGGETRQXYKDTRRFPLXAPSCALXFRP 842
           V+ PR  RFSIGSAPLTSITK DAQ+ GGETRQ YKDTRRFPL APSCAL F P
Sbjct: 44  VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97


>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
           Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. SS
          Length = 114

 Score = 48.8 bits (111), Expect = 3e-04
 Identities = 27/77 (35%), Positives = 37/77 (48%)
 Frame = +3

Query: 612 YPXNQGITQEXTCEQKASKRPETVKRPRCWRFSIGSAPLTSITKIDAQVXGGETRQXYKD 791
           +P N  I  +    + + + P T        F   S PLT+ITKI  Q    +T+  YK 
Sbjct: 38  HPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKY 97

Query: 792 TRRFPLXAPSCALXFRP 842
           T  FPL +PS +L F P
Sbjct: 98  TTPFPLQSPSYSLLFPP 114


>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
           Myxococcus xanthus
          Length = 486

 Score = 41.5 bits (93), Expect = 0.047
 Identities = 24/57 (42%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 471 CXNESANARGXXVCXXGALPFPRSLTRCARSFGCGXRXQ-XTQRX*YGYPXNQGITQ 638
           C  + A AR   V    ALP  RS TRC RS GCG      +    YG P  QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322


>UniRef50_UPI00015C640B Cluster: hypothetical protein
           CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
           BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
           Citrobacter koseri ATCC BAA-895
          Length = 99

 Score = 39.9 bits (89), Expect = 0.14
 Identities = 21/42 (50%), Positives = 23/42 (54%)
 Frame = -2

Query: 880 RXEKGGXVSXKRQGRNXRAHEGAXRGKRLVSLXSCRVSPPXT 755
           + +K   VS KRQGRN RAHEGA   K   SL      PP T
Sbjct: 58  KGKKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99


>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
           Alpha-hemolysin - Aeromonas hydrophila
          Length = 59

 Score = 35.5 bits (78), Expect = 3.1
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +2

Query: 590 HSKXVIRLSTXSGDNAGXN 646
           HSK VIRLST SGDNAG N
Sbjct: 40  HSKAVIRLSTESGDNAGKN 58


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 619,978,133
Number of Sequences: 1657284
Number of extensions: 8239337
Number of successful extensions: 15492
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15490
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 135653814265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)