Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_B14.2
         (1316 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     31   2.0  
10_08_0642 - 19525774-19526554,19526657-19527075                       29   6.2  

>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
 Frame = +3

Query: 528 PFPRSLTRCARSF--GCGXRXQXTQRX*YGYPXNQGITQ--EXTCEQKASKRPETV 683
           P+PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0642 - 19525774-19526554,19526657-19527075
          Length = 399

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -3

Query: 177 LRCVTPPAGLPRGCG*PLPKPW 112
           LR  +PPAG+PR CG  +P+ W
Sbjct: 81  LRGASPPAGVPRCCG--MPRGW 100


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,950,004
Number of Sequences: 37544
Number of extensions: 269241
Number of successful extensions: 568
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4120436808
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)