Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_B13.2
         (1388 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    25   1.8  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    25   1.8  
AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    24   3.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   7.1  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   9.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   9.4  

>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 615 VESEFLTFGTHYIFLVSFRQRIYEIERTRRL 707
           V  E L   TH  + + F+Q IYE++  R +
Sbjct: 48  VHDEHLFIVTHQAYELWFKQIIYELDSIRNI 78


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 615 VESEFLTFGTHYIFLVSFRQRIYEIERTRRL 707
           V  E L   TH  + + F+Q IYE++  R +
Sbjct: 48  VHDEHLFIVTHQAYELWFKQIIYELDSIRNI 78


>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 615 VESEFLTFGTHYIFLVSFRQRIYEIERTR 701
           V  E L   TH  + + F+Q IYE++  R
Sbjct: 48  VHDEHLFIVTHQAYELWFKQIIYELDSIR 76


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 576 SCCVCPCDLSYV 541
           SC VC CD  Y+
Sbjct: 773 SCTVCTCDAKYL 784


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 742 QGNLK*EFGFHYTENGDKLLHVC 810
           +GNLK   G H  +   ++LH C
Sbjct: 175 KGNLKTHMGVHRAKPPMRVLHQC 197


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -3

Query: 672 DEMIQEKYNVYQMSRILIQQLYVISNFKLSISSCCVCPC 556
           D ++ EK NV  +   ++  L V  NF   +S   +C C
Sbjct: 238 DTIMYEKTNVTFVHLAVLNILRVGKNFVCLLSLIILCDC 276


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,562
Number of Sequences: 336
Number of extensions: 3982
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 41412683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)