Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_B13.2
(1388 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X07315-1|CAA30278.1| 127|Homo sapiens protein ( Human gene for ... 54 2e-06
U43939-1|AAA85905.1| 127|Homo sapiens nuclear transport factor ... 54 2e-06
CR456937-1|CAG33218.1| 127|Homo sapiens NUTF2 protein. 54 2e-06
BC002348-1|AAH02348.1| 127|Homo sapiens nuclear transport facto... 54 2e-06
BC011731-1|AAH11731.1| 449|Homo sapiens GTPase activating prote... 38 0.065
AF145284-1|AAD51932.1| 482|Homo sapiens RNA-binding protein iso... 38 0.065
AF053535-1|AAC95292.1| 449|Homo sapiens ras-GAP/RNA binding pro... 38 0.065
AF051311-1|AAC15705.1| 449|Homo sapiens Ras-GAP SH3 binding pro... 38 0.065
AB014560-1|BAA31635.2| 490|Homo sapiens KIAA0660 protein protein. 38 0.065
CR536535-1|CAG38772.1| 466|Homo sapiens G3BP protein. 37 0.15
U32519-1|AAB07787.1| 466|Homo sapiens GAP SH3 binding protein p... 35 0.61
BT019384-1|AAV38191.1| 466|Homo sapiens Ras-GTPase-activating p... 35 0.61
BC108278-1|AAI08279.1| 466|Homo sapiens GTPase activating prote... 35 0.61
BC006997-1|AAH06997.1| 466|Homo sapiens GTPase activating prote... 35 0.61
AK222606-1|BAD96326.1| 466|Homo sapiens Ras-GTPase-activating p... 35 0.61
>X07315-1|CAA30278.1| 127|Homo sapiens protein ( Human gene for
PP15 (placental protein 15). ).
Length = 127
Score = 53.6 bits (123), Expect = 2e-06
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 280 SC-PFXGVXLQGAVKIXXXLNXLPFQKITXIVTAVXSQPMFXGGVLINVLGSLKCDXAPP 456
SC + G QG I L+ LPFQKI +TA QP ++ V+G LK D P
Sbjct: 37 SCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPI 96
Query: 457 HLYMQTFVLKPLGASFYVQHXIFRLGIHD 543
+ Q F+LK + ++ + +FRL +H+
Sbjct: 97 MGFHQMFLLKNINDAWVCTNDMFRLALHN 125
>U43939-1|AAA85905.1| 127|Homo sapiens nuclear transport factor 2
protein.
Length = 127
Score = 53.6 bits (123), Expect = 2e-06
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 280 SC-PFXGVXLQGAVKIXXXLNXLPFQKITXIVTAVXSQPMFXGGVLINVLGSLKCDXAPP 456
SC + G QG I L+ LPFQKI +TA QP ++ V+G LK D P
Sbjct: 37 SCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPI 96
Query: 457 HLYMQTFVLKPLGASFYVQHXIFRLGIHD 543
+ Q F+LK + ++ + +FRL +H+
Sbjct: 97 MGFHQMFLLKNINDAWVCTNDMFRLALHN 125
>CR456937-1|CAG33218.1| 127|Homo sapiens NUTF2 protein.
Length = 127
Score = 53.6 bits (123), Expect = 2e-06
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 280 SC-PFXGVXLQGAVKIXXXLNXLPFQKITXIVTAVXSQPMFXGGVLINVLGSLKCDXAPP 456
SC + G QG I L+ LPFQKI +TA QP ++ V+G LK D P
Sbjct: 37 SCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPI 96
Query: 457 HLYMQTFVLKPLGASFYVQHXIFRLGIHD 543
+ Q F+LK + ++ + +FRL +H+
Sbjct: 97 MGFHQMFLLKNINDAWVCTNDMFRLALHN 125
>BC002348-1|AAH02348.1| 127|Homo sapiens nuclear transport factor 2
protein.
Length = 127
Score = 53.6 bits (123), Expect = 2e-06
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 280 SC-PFXGVXLQGAVKIXXXLNXLPFQKITXIVTAVXSQPMFXGGVLINVLGSLKCDXAPP 456
SC + G QG I L+ LPFQKI +TA QP ++ V+G LK D P
Sbjct: 37 SCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPI 96
Query: 457 HLYMQTFVLKPLGASFYVQHXIFRLGIHD 543
+ Q F+LK + ++ + +FRL +H+
Sbjct: 97 MGFHQMFLLKNINDAWVCTNDMFRLALHN 125
>BC011731-1|AAH11731.1| 449|Homo sapiens GTPase activating protein
(SH3 domain) binding protein 2 protein.
Length = 449
Score = 38.3 bits (85), Expect = 0.065
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +1
Query: 343 LPFQKITXIVTAVXSQPMFXGGVLINVLGSLKCDXAPPHLYMQTFVLKPLGA---SFYVQ 513
L F + + V + GV++ V+G L P +MQTFVL P G+ FYV
Sbjct: 68 LNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFYVH 127
Query: 514 HXIFR 528
+ +FR
Sbjct: 128 NDMFR 132
>AF145284-1|AAD51932.1| 482|Homo sapiens RNA-binding protein
isoform G3BP-2a protein.
Length = 482
Score = 38.3 bits (85), Expect = 0.065
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +1
Query: 343 LPFQKITXIVTAVXSQPMFXGGVLINVLGSLKCDXAPPHLYMQTFVLKPLGA---SFYVQ 513
L F + + V + GV++ V+G L P +MQTFVL P G+ FYV
Sbjct: 68 LNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFYVH 127
Query: 514 HXIFR 528
+ +FR
Sbjct: 128 NDMFR 132
>AF053535-1|AAC95292.1| 449|Homo sapiens ras-GAP/RNA binding
protein G3BP2 protein.
Length = 449
Score = 38.3 bits (85), Expect = 0.065
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +1
Query: 343 LPFQKITXIVTAVXSQPMFXGGVLINVLGSLKCDXAPPHLYMQTFVLKPLGA---SFYVQ 513
L F + + V + GV++ V+G L P +MQTFVL P G+ FYV
Sbjct: 68 LNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFYVH 127
Query: 514 HXIFR 528
+ +FR
Sbjct: 128 NDMFR 132
>AF051311-1|AAC15705.1| 449|Homo sapiens Ras-GAP SH3 binding
protein protein.
Length = 449
Score = 38.3 bits (85), Expect = 0.065
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +1
Query: 343 LPFQKITXIVTAVXSQPMFXGGVLINVLGSLKCDXAPPHLYMQTFVLKPLGA---SFYVQ 513
L F + + V + GV++ V+G L P +MQTFVL P G+ FYV
Sbjct: 68 LNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFYVH 127
Query: 514 HXIFR 528
+ +FR
Sbjct: 128 NDMFR 132
>AB014560-1|BAA31635.2| 490|Homo sapiens KIAA0660 protein protein.
Length = 490
Score = 38.3 bits (85), Expect = 0.065
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +1
Query: 343 LPFQKITXIVTAVXSQPMFXGGVLINVLGSLKCDXAPPHLYMQTFVLKPLGA---SFYVQ 513
L F + + V + GV++ V+G L P +MQTFVL P G+ FYV
Sbjct: 76 LNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFYVH 135
Query: 514 HXIFR 528
+ +FR
Sbjct: 136 NDMFR 140
>CR536535-1|CAG38772.1| 466|Homo sapiens G3BP protein.
Length = 466
Score = 37.1 bits (82), Expect = 0.15
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +1
Query: 406 GVLINVLGSLKCDXAPPHLYMQTFVLKPLGA---SFYVQHXIFR 528
GV++ V+G L D +MQTFVL P G+ FYV + IFR
Sbjct: 89 GVVVQVMGLLSNDNQALRRFMQTFVLAPEGSVANKFYVHNDIFR 132
>U32519-1|AAB07787.1| 466|Homo sapiens GAP SH3 binding protein
protein.
Length = 466
Score = 35.1 bits (77), Expect = 0.61
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +1
Query: 406 GVLINVLGSLKCDXAPPHLYMQTFVLKPLGA---SFYVQHXIFR 528
GV++ V+G L + +MQTFVL P G+ FYV + IFR
Sbjct: 89 GVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFR 132
>BT019384-1|AAV38191.1| 466|Homo sapiens Ras-GTPase-activating
protein SH3-domain-binding protein protein.
Length = 466
Score = 35.1 bits (77), Expect = 0.61
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +1
Query: 406 GVLINVLGSLKCDXAPPHLYMQTFVLKPLGA---SFYVQHXIFR 528
GV++ V+G L + +MQTFVL P G+ FYV + IFR
Sbjct: 89 GVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFR 132
>BC108278-1|AAI08279.1| 466|Homo sapiens GTPase activating protein
(SH3 domain) binding protein 1 protein.
Length = 466
Score = 35.1 bits (77), Expect = 0.61
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +1
Query: 406 GVLINVLGSLKCDXAPPHLYMQTFVLKPLGA---SFYVQHXIFR 528
GV++ V+G L + +MQTFVL P G+ FYV + IFR
Sbjct: 89 GVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFR 132
>BC006997-1|AAH06997.1| 466|Homo sapiens GTPase activating protein
(SH3 domain) binding protein 1 protein.
Length = 466
Score = 35.1 bits (77), Expect = 0.61
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +1
Query: 406 GVLINVLGSLKCDXAPPHLYMQTFVLKPLGA---SFYVQHXIFR 528
GV++ V+G L + +MQTFVL P G+ FYV + IFR
Sbjct: 89 GVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFR 132
>AK222606-1|BAD96326.1| 466|Homo sapiens Ras-GTPase-activating
protein SH3-domain-binding protein variant protein.
Length = 466
Score = 35.1 bits (77), Expect = 0.61
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +1
Query: 406 GVLINVLGSLKCDXAPPHLYMQTFVLKPLGA---SFYVQHXIFR 528
GV++ V+G L + +MQTFVL P G+ FYV + IFR
Sbjct: 89 GVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFR 132
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,113,818
Number of Sequences: 237096
Number of extensions: 2257986
Number of successful extensions: 2785
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2785
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 20224570446
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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