Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_B12.2
         (1333 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83128-4|CAB05639.1|  348|Caenorhabditis elegans Hypothetical pr...    30   4.2  
U39994-2|AAB37017.1|  378|Caenorhabditis elegans Hypothetical pr...    29   9.8  

>Z83128-4|CAB05639.1|  348|Caenorhabditis elegans Hypothetical
           protein W01D2.5 protein.
          Length = 348

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +1

Query: 256 PPFWCLLPARPVCNLATSSNLHXLWVCASXNPIVQMXATF 375
           PPF C++P  P    +T  N+  L  C    PIV+    F
Sbjct: 157 PPFCCIIPKLPTAR-STEKNIRRLEWCVLQAPIVRSIIIF 195


>U39994-2|AAB37017.1|  378|Caenorhabditis elegans Hypothetical
           protein C48C5.1 protein.
          Length = 378

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -1

Query: 616 FKIDSLYVIIYFVGLIARYTVFTLFRRHISM 524
           +K+ +LY+ I+ VG+I   T   + ++H  M
Sbjct: 52  YKVTALYIFIFLVGVIGNTTTCLVMKKHPMM 82


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,912,896
Number of Sequences: 27780
Number of extensions: 243512
Number of successful extensions: 611
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3735997402
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)