BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_B09.2
(1297 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08374-1|CAA69661.1| 383|Homo sapiens GP-39 cartilage protein p... 31 9.2
M80927-1|AAA16074.1| 383|Homo sapiens glycoprotein protein. 31 9.2
BT007223-1|AAP35887.1| 383|Homo sapiens chitinase 3-like 1 (car... 31 9.2
BC039132-1|AAH39132.1| 383|Homo sapiens chitinase 3-like 1 (car... 31 9.2
BC038354-1|AAH38354.1| 383|Homo sapiens chitinase 3-like 1 (car... 31 9.2
BC008568-1|AAH08568.1| 383|Homo sapiens chitinase 3-like 1 (car... 31 9.2
>Y08374-1|CAA69661.1| 383|Homo sapiens GP-39 cartilage protein
protein.
Length = 383
Score = 31.1 bits (67), Expect = 9.2
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +3
Query: 870 FGQLMQLKQANTGLKVLPSIGGWTLADPSSSXRQNXA*SFRCXVKN 1007
+G L LK N LK L S+GGW S + S R +K+
Sbjct: 77 YGMLNTLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSRRTFIKS 122
>M80927-1|AAA16074.1| 383|Homo sapiens glycoprotein protein.
Length = 383
Score = 31.1 bits (67), Expect = 9.2
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +3
Query: 870 FGQLMQLKQANTGLKVLPSIGGWTLADPSSSXRQNXA*SFRCXVKN 1007
+G L LK N LK L S+GGW S + S R +K+
Sbjct: 77 YGMLNTLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSRRTFIKS 122
>BT007223-1|AAP35887.1| 383|Homo sapiens chitinase 3-like 1
(cartilage glycoprotein-39) protein.
Length = 383
Score = 31.1 bits (67), Expect = 9.2
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +3
Query: 870 FGQLMQLKQANTGLKVLPSIGGWTLADPSSSXRQNXA*SFRCXVKN 1007
+G L LK N LK L S+GGW S + S R +K+
Sbjct: 77 YGMLNTLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSRRTFIKS 122
>BC039132-1|AAH39132.1| 383|Homo sapiens chitinase 3-like 1
(cartilage glycoprotein-39) protein.
Length = 383
Score = 31.1 bits (67), Expect = 9.2
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +3
Query: 870 FGQLMQLKQANTGLKVLPSIGGWTLADPSSSXRQNXA*SFRCXVKN 1007
+G L LK N LK L S+GGW S + S R +K+
Sbjct: 77 YGMLNTLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSRRTFIKS 122
>BC038354-1|AAH38354.1| 383|Homo sapiens chitinase 3-like 1
(cartilage glycoprotein-39) protein.
Length = 383
Score = 31.1 bits (67), Expect = 9.2
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +3
Query: 870 FGQLMQLKQANTGLKVLPSIGGWTLADPSSSXRQNXA*SFRCXVKN 1007
+G L LK N LK L S+GGW S + S R +K+
Sbjct: 77 YGMLNTLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSRRTFIKS 122
>BC008568-1|AAH08568.1| 383|Homo sapiens chitinase 3-like 1
(cartilage glycoprotein-39) protein.
Length = 383
Score = 31.1 bits (67), Expect = 9.2
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +3
Query: 870 FGQLMQLKQANTGLKVLPSIGGWTLADPSSSXRQNXA*SFRCXVKN 1007
+G L LK N LK L S+GGW S + S R +K+
Sbjct: 77 YGMLNTLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSRRTFIKS 122
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,391,942
Number of Sequences: 237096
Number of extensions: 2380965
Number of successful extensions: 4397
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4391
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18660671970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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