Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_B03.2
         (1498 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0506 - 18188785-18190599                                         35   0.19 

>09_04_0506 - 18188785-18190599
          Length = 604

 Score = 34.7 bits (76), Expect = 0.19
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -1

Query: 349 REEDTXPPPPXXREERRXERXXXXEXERERERE 251
           RE+D  PPP       R ER    E ERER+R+
Sbjct: 498 REKDLPPPPDWPERRHRDERDAGRERERERDRD 530



 Score = 29.5 bits (63), Expect = 7.2
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = -2

Query: 363 SPSRXEKKTXXXPPPXXERREXEREXXXXXEREREREXXXXXEXE 229
           S  R E++    PPP    R    E     ERERER+     E +
Sbjct: 492 SDRRREREKDLPPPPDWPERRHRDERDAGRERERERDRDRERERD 536


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,333,076
Number of Sequences: 37544
Number of extensions: 137871
Number of successful extensions: 559
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 404
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4791670604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)