Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_A23.2
(1231 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3H8.10 |spo20|sec14|sec14 cytosolic factor family Sec14|Schi... 52 2e-07
SPBC646.07c |||enoyl reductase|Schizosaccharomyces pombe|chr 2||... 36 0.012
SPAC589.05c |||conserved eukaryotic protein|Schizosaccharomyces ... 28 2.3
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 27 4.0
SPBC29A10.14 |rec8||meiotic cohesin complex subunit Rec8|Schizos... 27 7.0
SPAC1A6.11 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 27 7.0
SPBC1861.09 |ppk22||serine/threonine protein kinase Ppk22 |Schiz... 27 7.0
SPCC417.06c |ppk35|mug27|serine/threonine protein kinase Ppk35|S... 27 7.0
SPBC24C6.10c |||conserved eukaryotic protein|Schizosaccharomyces... 26 9.3
SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual 26 9.3
>SPAC3H8.10 |spo20|sec14|sec14 cytosolic factor family
Sec14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 286
Score = 51.6 bits (118), Expect = 2e-07
Identities = 59/240 (24%), Positives = 109/240 (45%), Gaps = 17/240 (7%)
Frame = +3
Query: 294 TRHKVIEELRRMVRERGECIPRRVDDAYCLRFLRCRRFIPALAHKLMVRYEDFRQK---N 464
T+ ++ +R +++ G R+DDA LRFLR R+F + ++ ++ E +R++ +
Sbjct: 27 TQQATLDSMRLELQKLG--YTERLDDATLLRFLRARKFNLQQSLEMFIKCEKWRKEFGVD 84
Query: 465 AYLYNCDPFGLQRVKNVYGGTLPESPENGRIVLM-RFGRWDPSAV----PIEDVVRCALF 629
+ N + V Y ++ +GR V + + G D + E +++ ++
Sbjct: 85 DLIKNFHYDEKEAVSKYYPQFYHKTDIDGRPVYVEQLGNIDLKKLYQITTPERMMQNLVY 144
Query: 630 MDEIAVMQ--PKLQ------ILGVTIIVDLDGLSIRHVRHLTPTVAYQIVSLMGVSFPLA 785
E+ ++ P I I+DL G+ I + H + Q S+ +P
Sbjct: 145 EYEMLALKRFPACSRKAGGLIETSCTIMDLKGVGITSI-HSVYSYIRQASSISQDYYPER 203
Query: 786 MHGLHIINYNWILNSVFYLFKQFIPAAVWSRLHFHGSNMES-LHKFIQPQYLPPEYGGSC 962
M ++IN W +S F L K F+ A ++H GSN +S L + I LP + GG+C
Sbjct: 204 MGKFYVINAPWGFSSAFNLIKGFLDEATVKKIHILGSNYKSALLEQIPADNLPAKLGGNC 263
>SPBC646.07c |||enoyl reductase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 295
Score = 35.9 bits (79), Expect = 0.012
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +3
Query: 717 VRHLTPTVAYQIVSLMGVSFPLAMHGLHIINYNWILNSVFYLFKQFIPAAVWSRLHFHGS 896
V+ L P + ++ V ++ PL +H I+NY WI + L A V LHF
Sbjct: 74 VKDLGPQIGWRTVFMIEYLGPLVIHLFFILNYKWIYRKDYNLCLNQKIAFVLVMLHFMKR 133
Query: 897 NMESL--HKF 920
ES+ H+F
Sbjct: 134 EYESIFVHRF 143
>SPAC589.05c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 346
Score = 28.3 bits (60), Expect = 2.3
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = +3
Query: 306 VIEELRRMVRERGECIPRRVDDAYCLRFLRCRRFIPALAHKLMVRYEDFRQKNAY 470
++EE R++R G + +YC +C L L+ + DFR + Y
Sbjct: 150 LLEERIRIMRASGRVLVDSYHGSYCGLLKKCHNQAQRLIKLLLADFPDFRDVSVY 204
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 210 IAFQAELSRYE--DPEFEEYAKKNCNEFPDTRHKVIEELRRMVRE 338
+ FQ+ L++YE DP E KKNC + ++ +L+ +E
Sbjct: 1337 LRFQSVLNKYERVDPTQLEELKKNCEALEKEKQELETKLQETAKE 1381
>SPBC29A10.14 |rec8||meiotic cohesin complex subunit
Rec8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 561
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -3
Query: 656 WLHHSNFIHEQGATNHVFDRHSTGIPASEPHKN 558
W H +F H Q +T H+ R S+P KN
Sbjct: 73 WAHQYSFFHSQVSTLHLRVRKELDHFTSKPFKN 105
>SPAC1A6.11 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 106
Score = 26.6 bits (56), Expect = 7.0
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = +2
Query: 116 KRLISIRYRLSILRNIAVRLLLY*SGHAVH*HRLPS 223
K L S Y LSIL NI + LY S H H L S
Sbjct: 51 KCLSSCNYALSILHNICLASFLYLSKCYYHTHILTS 86
>SPBC1861.09 |ppk22||serine/threonine protein kinase Ppk22
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 526
Score = 26.6 bits (56), Expect = 7.0
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = +3
Query: 930 QYLPPEYGGSCXHIISTEXWXXKXYXYXMI 1019
+Y+ PE SC H ++ + W + Y ++
Sbjct: 347 EYIAPEVIRSCGHTVAVDWWTLGIFIYEIL 376
>SPCC417.06c |ppk35|mug27|serine/threonine protein kinase
Ppk35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 624
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 670 RICSFGCITAISSMNRAQRTTSSIGTALGSQRPNL 566
++ FG TAI + N+ R ++ +A+ QRP L
Sbjct: 300 KLSDFGLSTAIVTSNQVNRLQHALVSAVNPQRPYL 334
>SPBC24C6.10c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 374
Score = 26.2 bits (55), Expect = 9.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 366 DDAYCLRFLRCRRFIPALAHKLMVRYEDFRQKNAY 470
++ YCLR L FIP L K M +++D + A+
Sbjct: 108 ENEYCLRLLASTGFIPVLI-KAMKQFKDRSENVAF 141
>SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 26.2 bits (55), Expect = 9.3
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 835 SICLNNLYRLQYGAACIFTXRTWNHSTSSYSPSTCHPS 948
S CL N + + +FT T H+ SSY S+ S
Sbjct: 224 SSCLRNSFVFEVPTIHVFTSTTQVHTESSYETSSSEQS 261
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,328,060
Number of Sequences: 5004
Number of extensions: 91429
Number of successful extensions: 234
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 234
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 667380970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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