Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_A17.2
(1281 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 38 0.015
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 37 0.027
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 37 0.027
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 37 0.027
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 36 0.047
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.25
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.25
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.33
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 32 1.0
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 32 1.0
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.8
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.8
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 31 1.8
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 31 1.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 3.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 3.1
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 24 6.3
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 29 7.1
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 7.1
Z81470-7|CAB03885.1| 129|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 9.4
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 9.4
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 9.4
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 37.9 bits (84), Expect = 0.015
Identities = 20/53 (37%), Positives = 20/53 (37%)
Frame = +2
Query: 482 FXXXGGGGGGFXXXKKXPPPXXXGGXFLGAXPXPPXKKXXXXXLGGGGGFXPP 640
F GGGGG PPP G G P LGGGGG PP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPP 69
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.1 bits (82), Expect = 0.027
Identities = 26/73 (35%), Positives = 26/73 (35%), Gaps = 12/73 (16%)
Frame = -1
Query: 675 PXFXGXPXXPXXGGX-----NPPPPPXXXXXXFFXGGX-------GXAPKKXPPXXXGGG 532
P G P P GG PPPPP GG G P PP GG
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG- 779
Query: 531 XFFXXKXPPPPPP 493
F PPPPPP
Sbjct: 780 --FKGGPPPPPPP 790
Score = 32.7 bits (71), Expect = 0.58
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -1
Query: 657 PXXPXXGGXNPPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXKXPPPPPP 493
P P G PPPPP G P P GG PPPPPP
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG------PPPPPPPP 765
Score = 29.9 bits (64), Expect = 4.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 995 PXGGXPPPPXXXXPGGXXXPPXFP 924
P GG PPPP PGG P P
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -2
Query: 578 GGXPPKXXPXXPXGGGFFFXXKXPPPPPPXXXKKKXXPFXXXFFXP 441
GG PP P P GGF PPPPPP P + P
Sbjct: 766 GGCPPPPPPPPP--GGF---KGGPPPPPPPGMFAPMAPVIPDYLPP 806
Score = 29.1 bits (62), Expect = 7.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 996 PXXGGPPPPXXKXPXGXXKXPXFPPG 919
P GGPPPP P P PPG
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPG 733
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.1 bits (82), Expect = 0.027
Identities = 26/73 (35%), Positives = 26/73 (35%), Gaps = 12/73 (16%)
Frame = -1
Query: 675 PXFXGXPXXPXXGGX-----NPPPPPXXXXXXFFXGGX-------GXAPKKXPPXXXGGG 532
P G P P GG PPPPP GG G P PP GG
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG- 779
Query: 531 XFFXXKXPPPPPP 493
F PPPPPP
Sbjct: 780 --FKGGPPPPPPP 790
Score = 32.7 bits (71), Expect = 0.58
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -1
Query: 657 PXXPXXGGXNPPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXKXPPPPPP 493
P P G PPPPP G P P GG PPPPPP
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG------PPPPPPPP 765
Score = 29.9 bits (64), Expect = 4.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 995 PXGGXPPPPXXXXPGGXXXPPXFP 924
P GG PPPP PGG P P
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -2
Query: 578 GGXPPKXXPXXPXGGGFFFXXKXPPPPPPXXXKKKXXPFXXXFFXP 441
GG PP P P GGF PPPPPP P + P
Sbjct: 766 GGCPPPPPPPPP--GGF---KGGPPPPPPPGMFAPMAPVIPDYLPP 806
Score = 29.1 bits (62), Expect = 7.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 996 PXXGGPPPPXXKXPXGXXKXPXFPPG 919
P GGPPPP P P PPG
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPG 733
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.1 bits (82), Expect = 0.027
Identities = 26/73 (35%), Positives = 26/73 (35%), Gaps = 12/73 (16%)
Frame = -1
Query: 675 PXFXGXPXXPXXGGX-----NPPPPPXXXXXXFFXGGX-------GXAPKKXPPXXXGGG 532
P G P P GG PPPPP GG G P PP GG
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG- 362
Query: 531 XFFXXKXPPPPPP 493
F PPPPPP
Sbjct: 363 --FKGGPPPPPPP 373
Score = 32.7 bits (71), Expect = 0.58
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -1
Query: 657 PXXPXXGGXNPPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXKXPPPPPP 493
P P G PPPPP G P P GG PPPPPP
Sbjct: 300 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG------PPPPPPPP 348
Score = 29.9 bits (64), Expect = 4.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 995 PXGGXPPPPXXXXPGGXXXPPXFP 924
P GG PPPP PGG P P
Sbjct: 347 PPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -2
Query: 578 GGXPPKXXPXXPXGGGFFFXXKXPPPPPPXXXKKKXXPFXXXFFXP 441
GG PP P P GGF PPPPPP P + P
Sbjct: 349 GGCPPPPPPPPP--GGF---KGGPPPPPPPGMFAPMAPVIPDYLPP 389
Score = 29.1 bits (62), Expect = 7.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 996 PXXGGPPPPXXKXPXGXXKXPXFPPG 919
P GGPPPP P P PPG
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPG 316
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 36.3 bits (80), Expect = 0.047
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = -1
Query: 657 PXXPXXGGXNPPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXKXPPPPP 496
P P G +PPPPP G G A ++ PP G G PPPPP
Sbjct: 127 PPPPPKGTGSPPPPPTGEPQDL--SGEGNASRRPPPPPKGTG------SPPPPP 172
Score = 35.9 bits (79), Expect = 0.062
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = -1
Query: 657 PXXPXXGGXNPPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXKXPPPPP 496
P P G PPPPP G G A ++ PP G G PPPPP
Sbjct: 33 PPPPPKGTGTPPPPPTGEPQDL--SGEGNASRRPPPPPKGTG------TPPPPP 78
Score = 35.9 bits (79), Expect = 0.062
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = -1
Query: 657 PXXPXXGGXNPPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXKXPPPPP 496
P P G PPPPP G G A ++ PP G G PPPPP
Sbjct: 96 PPPPPKGTGTPPPPPTGEPQDL--SGEGNASRRPPPPPKGTG------SPPPPP 141
Score = 33.5 bits (73), Expect = 0.33
Identities = 19/53 (35%), Positives = 22/53 (41%)
Frame = -1
Query: 657 PXXPXXGGXNPPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXKXPPPP 499
P P G +PPPPP G G A ++ PP G G PPPP
Sbjct: 251 PPPPPKGTGSPPPPPTGEPQDL--SGEGNASRRPPPPPKGTG------TPPPP 295
Score = 33.1 bits (72), Expect = 0.44
Identities = 19/54 (35%), Positives = 22/54 (40%)
Frame = -1
Query: 657 PXXPXXGGXNPPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXKXPPPPP 496
P P G +PPPPP G A ++ PP G G PPPPP
Sbjct: 158 PPPPPKGTGSPPPPPTGEPQDL--STEGNASRRPPPPPKGTG------TPPPPP 203
Score = 33.1 bits (72), Expect = 0.44
Identities = 19/54 (35%), Positives = 22/54 (40%)
Frame = -1
Query: 657 PXXPXXGGXNPPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXKXPPPPP 496
P P G +P PPP G G A ++ PP G G PPPPP
Sbjct: 220 PPPPPKGTGSPTPPPTGEPQDL--SGEGNASRRPPPPPKGTG------SPPPPP 265
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = -1
Query: 648 PXXGGXNPPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXKXPPPPP 496
P G PPPP G A ++ PP G G PPPPP
Sbjct: 66 PPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTG------TPPPPP 110
Score = 30.3 bits (65), Expect = 3.1
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = -1
Query: 657 PXXPXXGGXNPPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXKXPPPPP 496
P P G PPPPP G A ++ PP G G P PPP
Sbjct: 189 PPPPPKGTGTPPPPPTGEPQDL--SAEGYASRRPPPPPKGTG------SPTPPP 234
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.25
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = -1
Query: 675 PXFXGXPXXPXXGGXNPPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXKXPPPPP 496
P P P G PPPPP G P PP G PPPPP
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGM--GGMPPPPP 338
Query: 495 P 493
P
Sbjct: 339 P 339
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -1
Query: 657 PXXPXXGGXNPPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXKXPPPPPP 493
P GG PPPPP G P PP G PPPPPP
Sbjct: 339 PGMRYPGGMPPPPPPRYPSAG--PGMYPPPPPSRPPAPPSGHGMI----PPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.9 bits (74), Expect = 0.25
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = -1
Query: 675 PXFXGXPXXPXXGGXNPPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXKXPPPPP 496
P P P G PPPPP G P PP G PPPPP
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGM--GGMPPPPP 348
Query: 495 P 493
P
Sbjct: 349 P 349
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -1
Query: 657 PXXPXXGGXNPPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXKXPPPPPP 493
P GG PPPPP G P PP G PPPPPP
Sbjct: 349 PGMRYPGGMPPPPPPRYPSAG--PGMYPPPPPSRPPAPPSGHGMI----PPPPPP 397
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.5 bits (73), Expect = 0.33
Identities = 32/106 (30%), Positives = 35/106 (33%)
Frame = +2
Query: 536 PPXXXGGXFLGAXPXPPXKKXXXXXLGGGGGFXPPXXGXXGXPXKXGXTXKKNFLKXGPK 715
PP G GA PP GG GG+ PP G G P G + GP
Sbjct: 380 PPPQSGPP--GAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPP------QGGPG 431
Query: 716 XXKXXKRGGXGXF*KXXPPPKKKKKXXPXXXGGKPPXXXKKPGXXP 853
GG G + PPP P G PP PG P
Sbjct: 432 GFGPPPPGGPGAY---GPPP----TGFP-PVGAPPPGAAGAPGGNP 469
Score = 32.3 bits (70), Expect = 0.76
Identities = 26/92 (28%), Positives = 28/92 (30%), Gaps = 4/92 (4%)
Frame = +2
Query: 767 PPPKKKKKXXPXXXGGKPPXXXKKPG---XXPXKTPXGXXFXXXXXKKKXXXXXPGGKXG 937
PPP++ P GG PP PG P P G PGG G
Sbjct: 351 PPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGA--FAPPPSAFGAPQGPGGPGG 408
Query: 938 XXXXPXGXXXXGGG-GPPXXGXXKTPPXXXXG 1030
P G G GPP G P G
Sbjct: 409 YGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGG 440
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.9 bits (69), Expect = 1.0
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -2
Query: 578 GGXPPKXXPXXPXGGGFFFXXKXPPPPPP 492
GG PP+ P P GG F P PPP
Sbjct: 107 GGVPPQAQPFNPHGGSMFGGPGGPGGPPP 135
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.9 bits (69), Expect = 1.0
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -2
Query: 578 GGXPPKXXPXXPXGGGFFFXXKXPPPPPP 492
GG PP+ P P GG F P PPP
Sbjct: 387 GGVPPQAQPFNPHGGSMFGGPGGPGGPPP 415
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = -1
Query: 627 PPPPPXXXXXXFFXGG-XGXAPKKXPPXXXGGGXFFXXKXPPPPPP 493
PPPPP F AP PP G PPPPPP
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPP 654
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = -1
Query: 627 PPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXKXPPPPPP 493
PPPPP P PP G PPPPPP
Sbjct: 611 PPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 655
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -1
Query: 627 PPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXKXPP 505
PPPPP G P PP GG K PP
Sbjct: 632 PPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPP 672
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = -1
Query: 627 PPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXKXPPPPPP 493
PPPPP P PP PPPPPP
Sbjct: 613 PPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = -1
Query: 627 PPPPPXXXXXXFFXGG-XGXAPKKXPPXXXGGGXFFXXKXPPPPPP 493
PPPPP F AP PP G PPPPPP
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPP 480
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = -1
Query: 627 PPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXKXPPPPPP 493
PPPPP P PP G PPPPPP
Sbjct: 437 PPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 481
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -1
Query: 627 PPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXKXPP 505
PPPPP G P PP GG K PP
Sbjct: 458 PPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPP 498
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = -1
Query: 627 PPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXKXPPPPPP 493
PPPPP P PP PPPPPP
Sbjct: 439 PPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 483
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +2
Query: 920 PGGKXGXXXXPXGXXXXGGGGPPXXGXXKTPPXXXXGXXXXXXXXPPXK 1066
PGG G P G GGGGP PP G P K
Sbjct: 618 PGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPPRKSISPAVK 666
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisomerase
III protein.
Length = 759
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +2
Query: 920 PGGKXGXXXXPXGXXXXGGGGPPXXGXXKTPPXXXXGXXXXXXXXPPXK 1066
PGG G P G GGGGP PP G P K
Sbjct: 618 PGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPPRKSISPAVK 666
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Frame = -1
Query: 669 FXGXPXXPXXGGXNPPPPPXXXXXXFFXGGXGXAPKK-XPPXXXGGGXFFXXKXPPPPPP 493
F G P G PPPPP G P PP G PPPPP
Sbjct: 225 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 284
Score = 31.1 bits (67), Expect = 1.8
Identities = 23/71 (32%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Frame = -1
Query: 675 PXFXGXPXXPXXGGXNPPPPPXXXXXXFFXGGXGXAPK-KXPPXXXGGGXFFXXKXPPPP 499
P G P P G PPPPP G P PP GG PPP
Sbjct: 283 PPAGGSPPPPRAGSPPPPPPP-----------RGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
Query: 498 PPXXXKKKKXP 466
PP +K++ P
Sbjct: 332 PP--RQKRQAP 340
Score = 29.1 bits (62), Expect = 7.1
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Frame = -1
Query: 636 GXNPPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXK--XPPPPPP 493
G PPPP G P PP GG + PPPPPP
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Frame = -1
Query: 669 FXGXPXXPXXGGXNPPPPPXXXXXXFFXGGXGXAPKK-XPPXXXGGGXFFXXKXPPPPPP 493
F G P G PPPPP G P PP G PPPPP
Sbjct: 246 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 305
Score = 31.1 bits (67), Expect = 1.8
Identities = 23/71 (32%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Frame = -1
Query: 675 PXFXGXPXXPXXGGXNPPPPPXXXXXXFFXGGXGXAPK-KXPPXXXGGGXFFXXKXPPPP 499
P G P P G PPPPP G P PP GG PPP
Sbjct: 304 PPAGGSPPPPRAGSPPPPPPP-----------RGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
Query: 498 PPXXXKKKKXP 466
PP +K++ P
Sbjct: 353 PP--RQKRQAP 361
Score = 29.1 bits (62), Expect = 7.1
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Frame = -1
Query: 636 GXNPPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXK--XPPPPPP 493
G PPPP G P PP GG + PPPPPP
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Frame = -1
Query: 669 FXGXPXXPXXGGXNPPPPPXXXXXXFFXGGXGXAPKK-XPPXXXGGGXFFXXKXPPPPPP 493
F G P G PPPPP G P PP G PPPPP
Sbjct: 231 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 290
Score = 31.1 bits (67), Expect = 1.8
Identities = 23/71 (32%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Frame = -1
Query: 675 PXFXGXPXXPXXGGXNPPPPPXXXXXXFFXGGXGXAPK-KXPPXXXGGGXFFXXKXPPPP 499
P G P P G PPPPP G P PP GG PPP
Sbjct: 289 PPAGGSPPPPRAGSPPPPPPP-----------RGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
Query: 498 PPXXXKKKKXP 466
PP +K++ P
Sbjct: 338 PP--RQKRQAP 346
Score = 29.1 bits (62), Expect = 7.1
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Frame = -1
Query: 636 GXNPPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXK--XPPPPPP 493
G PPPP G P PP GG + PPPPPP
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/65 (29%), Positives = 21/65 (32%), Gaps = 1/65 (1%)
Frame = -1
Query: 657 PXXPXXGGXNPPPPPXXXXXXFFXGGXGXA-PKKXPPXXXGGGXFFXXKXPPPPPPXXXK 481
P P P PPP G P PP PPPPPP +
Sbjct: 1344 PPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMIL----PPPPPPLPSE 1399
Query: 480 KKKXP 466
+KK P
Sbjct: 1400 EKKNP 1404
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.3 bits (65), Expect = 3.1
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -1
Query: 675 PXFXGXPXXPXXGGXNPPPPPXXXXXXFFXGGXGXAPKKXPPXXXGGGXFFXXKXPPPP 499
P G P P G PPPP G P K PP G F PPPP
Sbjct: 710 PGIPGYPPAPPPPGVGPPPPQGIPP-------MGFDPNKPPPPMFQQG--FNAGAPPPP 759
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = -1
Query: 747 PXPPLFXXLXXXGPXFKKFFXXVXPXFXGXPXXPXXGGXNPPPPP 613
P PP + P F P G P P G PPPPP
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPP 119
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 23.8 bits (49), Expect(2) = 6.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -1
Query: 639 GGXNPPPPPXXXXXXFFXGGXG 574
GG PPPPP GG G
Sbjct: 50 GGCAPPPPPPACGGGCGGGGGG 71
Score = 23.8 bits (49), Expect(2) = 6.3
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -1
Query: 585 GGXGXAPKKXPPXXXGGGXFFXXKXPPPPPP 493
GG G GGG PPPPPP
Sbjct: 86 GGGGGGCGGGGGGCGGGGGCGGGCAPPPPPP 116
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 29.1 bits (62), Expect = 7.1
Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = +2
Query: 479 FFXXXGGGGGGFXXXKKXPPPXXXGGXFLGAXPXPPXK--KXXXXXLGGGGGFXPPXXG 649
F GGGGG PPP GG L P + + GGGG P G
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGGPSLPPLQLPRFELPRLSLPSFGGGGCGGPAPCG 75
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.1 bits (62), Expect = 7.1
Identities = 35/153 (22%), Positives = 41/153 (26%), Gaps = 2/153 (1%)
Frame = +2
Query: 536 PPXXXGGXFLGAXPXPPXKKXXXXXLGGGGGFXPPXXGXXGXPXKXGXTXKKNFLKXGPK 715
PP G G P PP +K G G P G G G + +
Sbjct: 136 PPGRDGALLPGPPPKPPCQKCPPGPPGPAG--PPGPKGLPGPQGDAGTSGQDGVPGLPGP 193
Query: 716 XXKXXKRGGXGXF*KXXPPPKKKKKXXPXXXGGKPPXXXKKPGXXPXKTPXGXXFXXXXX 895
+G G P K G PP PG + P G
Sbjct: 194 PGPSGPQGAPG-----VPGEKGPTGEPGKVINGAPPGPPGPPGPPGPQGPPGPPGKDGQP 248
Query: 896 KKKXXXXXPG--GKXGXXXXPXGXXXXGGGGPP 988
K PG G+ G P G GPP
Sbjct: 249 GKAGPPGLPGDPGEKGSDGLPGPHGGTGPRGPP 281
>Z81470-7|CAB03885.1| 129|Caenorhabditis elegans Hypothetical
protein C14A6.8 protein.
Length = 129
Score = 26.6 bits (56), Expect(2) = 7.1
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1
Query: 657 PXXPXXGGXNPPPPP 613
P P GG PPPPP
Sbjct: 28 PNAPAVGGNEPPPPP 42
Score = 21.0 bits (42), Expect(2) = 7.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1
Query: 510 PPPPPP 493
PPPPPP
Sbjct: 39 PPPPPP 44
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.7 bits (61), Expect = 9.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 566 PKXXPXXPXGGGFFFXXKXPPPPPP 492
P P P GGG+ + PPPPPP
Sbjct: 39 PPPPPPPPCGGGY----EAPPPPPP 59
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = -2
Query: 584 GXGGXPPKXXPXXPXGG-GFFFXXKXPPPPPP 492
G GG P P GG G F PPPP P
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPPMP 683
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = -2
Query: 584 GXGGXPPKXXPXXPXGG-GFFFXXKXPPPPPP 492
G GG P P GG G F PPPP P
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPPMP 683
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.313 0.148 0.488
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,829,899
Number of Sequences: 27780
Number of extensions: 317642
Number of successful extensions: 2864
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1524
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3579019094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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