Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_A15.2
(1408 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 2.0
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 31 2.0
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 31 2.0
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 31 2.0
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 6.0
Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical p... 29 7.9
Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical p... 29 7.9
Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical pr... 29 7.9
Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical pr... 29 7.9
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 7.9
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 7.9
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 31.1 bits (67), Expect = 2.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 1213 PPPPXXFXXXFPPPPPXXXG 1272
PPPP F PPPPP G
Sbjct: 84 PPPPPMFAGGIPPPPPMMGG 103
Score = 30.7 bits (66), Expect = 2.6
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 1338 PPPPXKKKXKXXPPPXXXXPPPPXXXXGGG 1249
PPPP PPP PPPP G G
Sbjct: 95 PPPPPMMGGIPPPPPMFGAPPPPPPPSGLG 124
Score = 29.5 bits (63), Expect = 6.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 1213 PPPPXXFXXXFPPPPPXXXG 1272
PPPP F PPPPP G
Sbjct: 105 PPPPPMFGAPPPPPPPSGLG 124
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 2.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 1302 PPPXXXXPPPPXXXXGGGGEXGXKXXGGGG 1213
PPP PP P GGG GGGG
Sbjct: 304 PPPPPPPPPAPAPVSSGGGYSEQSSGGGGG 333
Score = 29.9 bits (64), Expect = 4.5
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 1302 PPPXXXXPPPPXXXXGGGGEXGXKXXGGGG 1213
PPP PPP GG + GGGG
Sbjct: 303 PPPPPPPPPPAPAPVSSGGGYSEQSSGGGG 332
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 2.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 1302 PPPXXXXPPPPXXXXGGGGEXGXKXXGGGG 1213
PPP PP P GGG GGGG
Sbjct: 304 PPPPPPPPPAPAPVSSGGGYSEQSSGGGGG 333
Score = 29.9 bits (64), Expect = 4.5
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 1302 PPPXXXXPPPPXXXXGGGGEXGXKXXGGGG 1213
PPP PPP GG + GGGG
Sbjct: 303 PPPPPPPPPPAPAPVSSGGGYSEQSSGGGG 332
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical protein
C16B8.3 protein.
Length = 164
Score = 31.1 bits (67), Expect = 2.0
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 1207 FXPPPPXXFXXXFPPPPPXXXGGG 1278
+ PPPP + + PPPP G G
Sbjct: 50 YAPPPPRPYGATYAPPPPMGIGAG 73
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 31.1 bits (67), Expect = 2.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 1205 FFXPPPPXFFXPXSPP 1252
FF PPPP F P SPP
Sbjct: 352 FFPPPPPHFMRPSSPP 367
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +1
Query: 1201 FFFXPPPPXXFXXXFPPPPPXXXGGG 1278
F F PPPP FPPPPP G G
Sbjct: 293 FGFFPPPPRGH---FPPPPPHFMGRG 315
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 31.1 bits (67), Expect = 2.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 1205 FFXPPPPXFFXPXSPP 1252
FF PPPP F P SPP
Sbjct: 352 FFPPPPPHFMRPSSPP 367
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +1
Query: 1201 FFFXPPPPXXFXXXFPPPPPXXXGGG 1278
F F PPPP FPPPPP G G
Sbjct: 293 FGFFPPPPRGH---FPPPPPHFMGRG 315
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 6.0
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 1338 PPPPXKKKXKXXPPPXXXXPPPP 1270
PPPP PPP PPPP
Sbjct: 57 PPPPMCPPPPPPPPPPMCPPPPP 79
>Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical
protein K10C8.3c protein.
Length = 432
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 1281 PPPPXXXXGGGGEXGXKXXGGGG 1213
PPPP GG G GGGG
Sbjct: 218 PPPPSNPYGGSGNDNGSSGGGGG 240
>Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical
protein K10C8.3a protein.
Length = 445
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 1281 PPPPXXXXGGGGEXGXKXXGGGG 1213
PPPP GG G GGGG
Sbjct: 218 PPPPSNPYGGSGNDNGSSGGGGG 240
>Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical protein
K10C8.3c protein.
Length = 432
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 1281 PPPPXXXXGGGGEXGXKXXGGGG 1213
PPPP GG G GGGG
Sbjct: 218 PPPPSNPYGGSGNDNGSSGGGGG 240
>Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical protein
K10C8.3a protein.
Length = 445
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 1281 PPPPXXXXGGGGEXGXKXXGGGG 1213
PPPP GG G GGGG
Sbjct: 218 PPPPSNPYGGSGNDNGSSGGGGG 240
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 1338 PPPPXKKKXKXXPPPXXXXPPPP 1270
PPPP PPP PPPP
Sbjct: 707 PPPPGIPGYPPAPPPPGVGPPPP 729
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +2
Query: 1250 PPPXXXXGGGGXXFXGGGXFFXFFLXGGGG 1339
PP GGGG F GG + GGGG
Sbjct: 314 PPRTPAGGGGGGDFPAGGGGGGYSTGGGGG 343
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,724,617
Number of Sequences: 27780
Number of extensions: 187920
Number of successful extensions: 2563
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1831
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3996164352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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