Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_A14.2
(1345 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 39 0.007
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 39 0.007
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 39 0.007
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 35 0.15
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 33 0.35
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 31 1.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 3.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 3.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 3.2
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 7.5
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 7.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 9.9
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 9.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 9.9
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 9.9
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 9.9
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 39.1 bits (87), Expect = 0.007
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -1
Query: 949 PPXXXXGFFSXPPLXGGXPPPXXXXPXXXXXXPPPXPGG 833
P G + PP+ GG PPP P PPP PGG
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGG 734
Score = 38.7 bits (86), Expect = 0.009
Identities = 20/54 (37%), Positives = 21/54 (38%)
Frame = -1
Query: 985 PGGXXXXFXXXXPPXXXXGFFSXPPLXGGXPPPXXXXPXXXXXXPPPXPGGKXG 824
PGG PP G PP+ GG PPP PPP PGG G
Sbjct: 732 PGGLPPITGGPPPPPPPGGL---PPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Score = 31.5 bits (68), Expect = 1.4
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = -1
Query: 916 PPLXGGXPPPXXXX---PXXXXXXPPPXPGG 833
PP+ GG PPP P PPP PGG
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 39.1 bits (87), Expect = 0.007
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -1
Query: 949 PPXXXXGFFSXPPLXGGXPPPXXXXPXXXXXXPPPXPGG 833
P G + PP+ GG PPP P PPP PGG
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGG 734
Score = 38.7 bits (86), Expect = 0.009
Identities = 20/54 (37%), Positives = 21/54 (38%)
Frame = -1
Query: 985 PGGXXXXFXXXXPPXXXXGFFSXPPLXGGXPPPXXXXPXXXXXXPPPXPGGKXG 824
PGG PP G PP+ GG PPP PPP PGG G
Sbjct: 732 PGGLPPITGGPPPPPPPGGL---PPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Score = 31.5 bits (68), Expect = 1.4
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = -1
Query: 916 PPLXGGXPPPXXXX---PXXXXXXPPPXPGG 833
PP+ GG PPP P PPP PGG
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 39.1 bits (87), Expect = 0.007
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -1
Query: 949 PPXXXXGFFSXPPLXGGXPPPXXXXPXXXXXXPPPXPGG 833
P G + PP+ GG PPP P PPP PGG
Sbjct: 279 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGG 317
Score = 38.7 bits (86), Expect = 0.009
Identities = 20/54 (37%), Positives = 21/54 (38%)
Frame = -1
Query: 985 PGGXXXXFXXXXPPXXXXGFFSXPPLXGGXPPPXXXXPXXXXXXPPPXPGGKXG 824
PGG PP G PP+ GG PPP PPP PGG G
Sbjct: 315 PGGLPPITGGPPPPPPPGGL---PPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 365
Score = 31.5 bits (68), Expect = 1.4
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = -1
Query: 916 PPLXGGXPPPXXXX---PXXXXXXPPPXPGG 833
PP+ GG PPP P PPP PGG
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGG 333
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 34.7 bits (76), Expect = 0.15
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = -1
Query: 1006 PXXKXFXPGGXXXXFXXXXPPXXXXGFFSXPPLXGGXPPPXXXXPXXXXXXPPPXPGG 833
P F P PP G PP+ GG PPP P PPP P G
Sbjct: 68 PVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPP---PPMFGAPPPPPPPSG 122
Score = 33.5 bits (73), Expect = 0.35
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -1
Query: 949 PPXXXXGFFSXPPLXGGXPPPXXXXPXXXXXXPPPXP 839
PP GF PP GG PPP P PPP P
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPP---PPMFAGGIPPPPP 99
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 33.5 bits (73), Expect = 0.35
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -2
Query: 663 PPXPFLXFXPFLXPFXKIFFXGXPPFFXXXXXPPXGGXKXXPPPQXP 523
P P F P P I G PP F PP G PPP P
Sbjct: 121 PACPPPCFGPACAPSAPIIVNGPPPCFGPACPPPCFGPACAPPPPAP 167
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -2
Query: 663 PPXPFLXFXPFLXPFXKIFFXGXPPFFXXXXXPPXGGXKXXPP 535
P P F P P I G PP F PP G PP
Sbjct: 65 PACPPPCFGPACVPLAPIIVNGPPPCFGPACPPPCFGPACAPP 107
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 31.5 bits (68), Expect = 1.4
Identities = 35/164 (21%), Positives = 36/164 (21%), Gaps = 9/164 (5%)
Frame = +3
Query: 450 PXPXGXGGXXXGXXPPXPXKKXXXPGFGGGXG-----XXPPXRGXXGXXXKRGXXXXXXX 614
P P G G PP P P GG G PP G G G
Sbjct: 182 PGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGP 241
Query: 615 XXXXXXXXXXPKXGXGGGFXKXXXXXXXXXXXXXXXXG----GXTPXXXKKXGXXPKKXP 782
P G G F G G P G P P
Sbjct: 242 PGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGP 301
Query: 783 RGPXFXNXGXKKKXPXXPPGXGGGXXKXXXGXXXXGGGXPPXRG 914
GP + P P G G PP G
Sbjct: 302 PGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG 345
Score = 29.1 bits (62), Expect = 7.5
Identities = 34/164 (20%), Positives = 35/164 (21%), Gaps = 9/164 (5%)
Frame = +3
Query: 450 PXPXGXGGXXXGXXPPXPXKKXXXPGFGGGXG-----XXPPXRGXXGXXXKRGXXXXXXX 614
P P G PP P P GG G PP G G G
Sbjct: 317 PGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGP 376
Query: 615 XXXXXXXXXXPKXGXGGGFXKXXXXXXXXXXXXXXXXG----GXTPXXXKKXGXXPKKXP 782
P G G F G G P G P P
Sbjct: 377 PGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGP 436
Query: 783 RGPXFXNXGXKKKXPXXPPGXGGGXXKXXXGXXXXGGGXPPXRG 914
GP + P P G G PP G
Sbjct: 437 PGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGG 480
Score = 29.1 bits (62), Expect = 7.5
Identities = 34/164 (20%), Positives = 35/164 (21%), Gaps = 9/164 (5%)
Frame = +3
Query: 450 PXPXGXGGXXXGXXPPXPXKKXXXPGFGGGXG-----XXPPXRGXXGXXXKRGXXXXXXX 614
P P G PP P P GG G PP G G G
Sbjct: 332 PGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGP 391
Query: 615 XXXXXXXXXXPKXGXGGGFXKXXXXXXXXXXXXXXXXG----GXTPXXXKKXGXXPKKXP 782
P G G F G G P G P P
Sbjct: 392 PGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGP 451
Query: 783 RGPXFXNXGXKKKXPXXPPGXGGGXXKXXXGXXXXGGGXPPXRG 914
GP + P P G G PP G
Sbjct: 452 PGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG 495
Score = 28.7 bits (61), Expect = 9.9
Identities = 34/164 (20%), Positives = 35/164 (21%), Gaps = 9/164 (5%)
Frame = +3
Query: 450 PXPXGXGGXXXGXXPPXPXKKXXXPGFGGGXGXX-----PPXRGXXGXXXKRGXXXXXXX 614
P P G PP P P GG G PP G G G
Sbjct: 347 PGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGP 406
Query: 615 XXXXXXXXXXPKXGXGGGFXKXXXXXXXXXXXXXXXXG----GXTPXXXKKXGXXPKKXP 782
P G G F G G P G P P
Sbjct: 407 PGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGP 466
Query: 783 RGPXFXNXGXKKKXPXXPPGXGGGXXKXXXGXXXXGGGXPPXRG 914
GP + P P G G PP G
Sbjct: 467 PGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGG 510
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = -1
Query: 949 PPXXXXGFFSXPPLXGGXPPP-XXXXPXXXXXXPPPXPGG 833
PP G PP G PPP P PPP P G
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 286
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = -1
Query: 949 PPXXXXGFFSXPPLXGGXPPP-XXXXPXXXXXXPPPXPGG 833
PP G PP G PPP P PPP P G
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 307
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = -1
Query: 949 PPXXXXGFFSXPPLXGGXPPP-XXXXPXXXXXXPPPXPGG 833
PP G PP G PPP P PPP P G
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 292
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.1 bits (62), Expect = 7.5
Identities = 21/74 (28%), Positives = 22/74 (29%), Gaps = 1/74 (1%)
Frame = -2
Query: 666 PPPXPFLXFXPF-LXPFXKIFFXGXPPFFXXXXXPPXGGXKXXPPPQXPGXXXFXGGXGX 490
PPP P + P P PP PP GG PPP GG G
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
Query: 489 XXXKXXPXXPXXXG 448
P P G
Sbjct: 808 MYPPLIPTRPGPGG 821
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.1 bits (62), Expect = 7.5
Identities = 21/74 (28%), Positives = 22/74 (29%), Gaps = 1/74 (1%)
Frame = -2
Query: 666 PPPXPFLXFXPF-LXPFXKIFFXGXPPFFXXXXXPPXGGXKXXPPPQXPGXXXFXGGXGX 490
PPP P + P P PP PP GG PPP GG G
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
Query: 489 XXXKXXPXXPXXXG 448
P P G
Sbjct: 808 MYPPLIPTRPGPGG 821
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 9.9
Identities = 15/48 (31%), Positives = 18/48 (37%)
Frame = +1
Query: 451 PXPGGXGXXFXGPXPXPPXKXPGPRXLXXXXXFXPPXGGXXGXPKKGG 594
P P + P P PP + PGP + PP G P GG
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP--PPPPPSRFGPPGMGG 332
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.7 bits (61), Expect = 9.9
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = -1
Query: 949 PPXXXXGFFSXPP-LXGGXPPPXXXXPXXXXXXPPPXPG 836
PP PP L GG PPP P PPP PG
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPP----PPLGIIPPPPPPG 805
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 9.9
Identities = 15/48 (31%), Positives = 18/48 (37%)
Frame = +1
Query: 451 PXPGGXGXXFXGPXPXPPXKXPGPRXLXXXXXFXPPXGGXXGXPKKGG 594
P P + P P PP + PGP + PP G P GG
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP--PPPPPSRFGPPGMGG 342
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.7 bits (61), Expect = 9.9
Identities = 17/57 (29%), Positives = 18/57 (31%), Gaps = 1/57 (1%)
Frame = -1
Query: 1006 PXXKXFXPGGXXXXFXXXXPPXXXXGFFSXPPLXG-GXPPPXXXXPXXXXXXPPPXP 839
P PG PP G+ PP G G PPP P PP P
Sbjct: 689 PRPAGLPPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPP 745
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.7 bits (61), Expect = 9.9
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = -1
Query: 949 PPXXXXGFFSXPP-LXGGXPPPXXXXPXXXXXXPPPXPG 836
PP PP L GG PPP P PPP PG
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPP----PPLGIIPPPPPPG 805
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.150 0.494
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,674,177
Number of Sequences: 27780
Number of extensions: 294735
Number of successful extensions: 945
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3777624114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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