Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_A13.2
         (1343 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113598-1|AAM29603.1|  177|Drosophila melanogaster RH51268p pro...    47   7e-05
AE014296-3179|AAN11653.1|  177|Drosophila melanogaster CG9368-PB...    47   7e-05
AE014296-3178|AAF49137.1|  182|Drosophila melanogaster CG9368-PA...    42   0.002

>AY113598-1|AAM29603.1|  177|Drosophila melanogaster RH51268p
           protein.
          Length = 177

 Score = 46.8 bits (106), Expect = 7e-05
 Identities = 22/77 (28%), Positives = 40/77 (51%)
 Frame = +2

Query: 323 ALAERVRAFKSDPEKVREATEFVDQLIXXXXXXXXXXXXXXDRSKFDAQDQGSGNLKRRL 502
           +L  R+ AFK +P+ +    E +D ++               +S+   + + +    + +
Sbjct: 23  SLEARIEAFKQNPQNMAALREALDDVLLRAETEANRRAVESQKSQQGKEKRPNFKNGKVV 82

Query: 503 GRARGFVLRMFDALCNC 553
            RARGFV+R+FDA+CNC
Sbjct: 83  NRARGFVVRIFDAICNC 99


>AE014296-3179|AAN11653.1|  177|Drosophila melanogaster CG9368-PB,
           isoform B protein.
          Length = 177

 Score = 46.8 bits (106), Expect = 7e-05
 Identities = 22/77 (28%), Positives = 40/77 (51%)
 Frame = +2

Query: 323 ALAERVRAFKSDPEKVREATEFVDQLIXXXXXXXXXXXXXXDRSKFDAQDQGSGNLKRRL 502
           +L  R+ AFK +P+ +    E +D ++               +S+   + + +    + +
Sbjct: 23  SLEARIEAFKQNPQNMAALREALDDVLLRAETEANRRAVESQKSQQGKEKRPNFKNGKVV 82

Query: 503 GRARGFVLRMFDALCNC 553
            RARGFV+R+FDA+CNC
Sbjct: 83  NRARGFVVRIFDAICNC 99


>AE014296-3178|AAF49137.1|  182|Drosophila melanogaster CG9368-PA,
           isoform A protein.
          Length = 182

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
 Frame = +2

Query: 323 ALAERVRAFKSDPEKVREATEFVDQLIXXXXXXXXXXXXXXDRSKFDAQDQGSGNLK--- 493
           +L  R+ AFK +P+ +    E +D ++               +S+   + + S  +    
Sbjct: 23  SLEARIEAFKQNPQNMAALREALDDVLLRAETEANRRAVESQKSQQGKEKRPSFAIPDFK 82

Query: 494 --RRLGRARGFVLRMFDALCNC 553
             + + RARGFV+R+FDA+CNC
Sbjct: 83  NGKVVNRARGFVVRIFDAICNC 104


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,939,543
Number of Sequences: 53049
Number of extensions: 606094
Number of successful extensions: 1511
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1509
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 7334317800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)