Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_A03.2
         (1272 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46894-1|CAA86996.1|  357|Drosophila melanogaster FKBP39 protein.      57   6e-08
AY094814-1|AAM11167.1|  357|Drosophila melanogaster LD30817p pro...    57   6e-08
AE014297-2012|AAF55171.2|  357|Drosophila melanogaster CG6226-PA...    57   6e-08

>Z46894-1|CAA86996.1|  357|Drosophila melanogaster FKBP39 protein.
          Length = 357

 Score = 56.8 bits (131), Expect = 6e-08
 Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
 Frame = +3

Query: 171 LNMFWGCIMXPNKRYTQVVXQPFHISQAAXDTSTGXNXPCQXXXXXDGKXFLVCTLQXNK 350
           ++MFWG  M P ++Y+Q + + FHIS  A D         +     + + ++V T+   K
Sbjct: 1   MSMFWGLNMKPERKYSQTIIKSFHISGVALD----KGQEAKLYLAAEKQEYIVATV--TK 54

Query: 351 CI-QVPLDLYFKTGXSIAFLTNGKCNVHLTGYL 446
            I QV LDL F  G  I F T G  +V L GYL
Sbjct: 55  AIPQVALDLNFSKGDRIMFYTAGDASVSLLGYL 87


>AY094814-1|AAM11167.1|  357|Drosophila melanogaster LD30817p
           protein.
          Length = 357

 Score = 56.8 bits (131), Expect = 6e-08
 Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
 Frame = +3

Query: 171 LNMFWGCIMXPNKRYTQVVXQPFHISQAAXDTSTGXNXPCQXXXXXDGKXFLVCTLQXNK 350
           ++MFWG  M P ++Y+Q + + FHIS  A D         +     + + ++V T+   K
Sbjct: 1   MSMFWGLNMKPERKYSQTIIKSFHISGVALD----KGQEAKLYLAAEKQEYIVATV--TK 54

Query: 351 CI-QVPLDLYFKTGXSIAFLTNGKCNVHLTGYL 446
            I QV LDL F  G  I F T G  +V L GYL
Sbjct: 55  AIPQVALDLNFSKGDRIMFYTAGDASVSLLGYL 87


>AE014297-2012|AAF55171.2|  357|Drosophila melanogaster CG6226-PA
           protein.
          Length = 357

 Score = 56.8 bits (131), Expect = 6e-08
 Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
 Frame = +3

Query: 171 LNMFWGCIMXPNKRYTQVVXQPFHISQAAXDTSTGXNXPCQXXXXXDGKXFLVCTLQXNK 350
           ++MFWG  M P ++Y+Q + + FHIS  A D         +     + + ++V T+   K
Sbjct: 1   MSMFWGLNMKPERKYSQTIIKSFHISGVALD----KGQEAKLYLAAEKQEYIVATV--TK 54

Query: 351 CI-QVPLDLYFKTGXSIAFLTNGKCNVHLTGYL 446
            I QV LDL F  G  I F T G  +V L GYL
Sbjct: 55  AIPQVALDLNFSKGDRIMFYTAGDASVSLLGYL 87


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,757,582
Number of Sequences: 53049
Number of extensions: 454234
Number of successful extensions: 858
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6845363280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)