Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_A02.2
(1240 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical... 34 0.24
U53342-5|AAA96217.1| 178|Caenorhabditis elegans Hypothetical pr... 30 3.9
DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein. 29 5.1
AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical ... 29 5.1
Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical p... 29 9.0
U56963-6|AAB38123.3| 324|Caenorhabditis elegans Serpentine rece... 29 9.0
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 29 9.0
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 29 9.0
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 29 9.0
>AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical
protein R12E2.1 protein.
Length = 531
Score = 33.9 bits (74), Expect = 0.24
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 358 KLVLSVCSPXFQAMF--KMXPTQHPIVFLKAVSHSALXXLLQFMYQGEVNVKQEELASFI 531
++VLS CSP F +MF +M + ++ + L L++F Y G + + + +
Sbjct: 71 RVVLSACSPYFLSMFTSQMAECYMREINMEEIEPPTLEALIEFCYTGAIAIDDSNVQDIL 130
Query: 532 STAEQLQV 555
A LQ+
Sbjct: 131 PAACLLQI 138
>U53342-5|AAA96217.1| 178|Caenorhabditis elegans Hypothetical
protein F01G12.1 protein.
Length = 178
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -2
Query: 912 HTLINKLWFHFGSDSIVLIFVW-YRHKFVFCRTRGTCF-QWIYA 787
HT+ K+WFH+G D +VL W K G F WI+A
Sbjct: 116 HTM--KMWFHWGFDEVVLFDFWRIDDKNALAVILGAGFGHWIFA 157
>DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein.
Length = 690
Score = 29.5 bits (63), Expect = 5.1
Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 358 KLVLSVCSPXFQAMFK--MXPTQHPIVFLKAVSHSALXXLLQFMYQGEVNVKQEELASFI 531
+ +L+ SP F+AMF M + + L+ + ++ ++ ++Y ++ + + I
Sbjct: 126 RYILAAASPYFKAMFTNGMVEMKKLTIELQDIPEESVRIIVDYIYTDKIAITMNNVHQLI 185
Query: 532 STAEQLQV 555
TA LQ+
Sbjct: 186 FTATVLQM 193
>AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical
protein W02G9.2 protein.
Length = 690
Score = 29.5 bits (63), Expect = 5.1
Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 358 KLVLSVCSPXFQAMFK--MXPTQHPIVFLKAVSHSALXXLLQFMYQGEVNVKQEELASFI 531
+ +L+ SP F+AMF M + + L+ + ++ ++ ++Y ++ + + I
Sbjct: 126 RYILAAASPYFKAMFTNGMVEMKKLTIELQDIPEESVRIIVDYIYTDKIAITMNNVHQLI 185
Query: 532 STAEQLQV 555
TA LQ+
Sbjct: 186 FTATVLQM 193
>Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical
protein T27E9.4a protein.
Length = 589
Score = 28.7 bits (61), Expect = 9.0
Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 358 KLVLSVCSPXFQAMFKMXPTQHPI--VFLKAVSHSALXXLLQFMYQGEVNVKQEELASFI 531
K++L+ P F+ MF + + + + ++ +++ + LL F Y GE+ + + S +
Sbjct: 66 KVILAATIPYFRGMFTLDLMEANMKEINIEDMNYETVDALLSFAYTGELRITTSNVQSIM 125
Query: 532 STAEQLQV 555
A Q+
Sbjct: 126 LGANFFQM 133
>U56963-6|AAB38123.3| 324|Caenorhabditis elegans Serpentine
receptor, class v protein31 protein.
Length = 324
Score = 28.7 bits (61), Expect = 9.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 652 IVFVVTTWGLASKSALVWMAWNFLHF 575
++F TTWGL +K + M + + HF
Sbjct: 59 MIFYTTTWGLRTKPGIREMLYTYQHF 84
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 28.7 bits (61), Expect = 9.0
Identities = 14/64 (21%), Positives = 27/64 (42%)
Frame = +1
Query: 364 VLSVCSPXFQAMFKMXPTQHPIVFLKAVSHSALXXLLQFMYQGEVNVKQEELASFISTAE 543
+L+ SP F A+FK + + + S L +MY G V + + ++ + A
Sbjct: 59 ILAAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELLRFAN 118
Query: 544 QLQV 555
+
Sbjct: 119 NFLI 122
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 28.7 bits (61), Expect = 9.0
Identities = 14/64 (21%), Positives = 27/64 (42%)
Frame = +1
Query: 364 VLSVCSPXFQAMFKMXPTQHPIVFLKAVSHSALXXLLQFMYQGEVNVKQEELASFISTAE 543
+L+ SP F A+FK + + + S L +MY G V + + ++ + A
Sbjct: 59 ILAAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELLRFAN 118
Query: 544 QLQV 555
+
Sbjct: 119 NFLI 122
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 28.7 bits (61), Expect = 9.0
Identities = 14/64 (21%), Positives = 27/64 (42%)
Frame = +1
Query: 364 VLSVCSPXFQAMFKMXPTQHPIVFLKAVSHSALXXLLQFMYQGEVNVKQEELASFISTAE 543
+L+ SP F A+FK + + + S L +MY G V + + ++ + A
Sbjct: 59 ILAAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELLRFAN 118
Query: 544 QLQV 555
+
Sbjct: 119 NFLI 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,817,796
Number of Sequences: 27780
Number of extensions: 289918
Number of successful extensions: 596
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3432936682
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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