Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_P24
         (894 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    24   1.8  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   7.5  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   7.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   7.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   7.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.9  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 762 PSSTKHTKYYLKIFQWLRKIC 700
           P  TKH + +L +  + RK C
Sbjct: 529 PQKTKHVRAFLGLCNFYRKFC 549


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 280 GHYFLEPXSMPWKSSL 327
           GH++L+    PWK S+
Sbjct: 461 GHWYLDCGFGPWKPSM 476


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 632 PSSMADLHHSWEISNCNQN 688
           PSS  DL+++  +SN N++
Sbjct: 40  PSSTIDLYNTSSVSNFNES 58


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 632 PSSMADLHHSWEISNCNQN 688
           PSS  DL+++  +SN N++
Sbjct: 40  PSSTIDLYNTSSVSNFNES 58


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 677 CNQNFKHGHIFLNH 718
           CN++F + H+  NH
Sbjct: 140 CNRSFGYKHVLQNH 153


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 11/42 (26%), Positives = 16/42 (38%)
 Frame = +3

Query: 663 GKLVTAIKISNMGIFFLTIEIFSDNILYAWLTMAASPWVANG 788
           GK  T  K S    ++   E+  +   Y W      P+  NG
Sbjct: 356 GKEGTYTKESGFLAYYEVCELLQNGATYIWDDEMKVPYAVNG 397


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,426
Number of Sequences: 336
Number of extensions: 4424
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)