Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_P24
         (894 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89792-1|AAB94380.1|  339|Caenorhabditis elegans seven-in-absent...    51   1e-06
AC024759-5|AAK68432.1|  419|Caenorhabditis elegans Hypothetical ...    51   1e-06
Z70681-2|CAA94578.2|  203|Caenorhabditis elegans Hypothetical pr...    34   0.16 
U21308-5|AAB93318.1|  258|Caenorhabditis elegans Warthog (hedgeh...    32   0.64 
AF164625-1|AAD47816.1|  944|Caenorhabditis elegans tandem-array-...    32   0.64 
AF022974-6|AAC48041.1|  944|Caenorhabditis elegans Tandem array ...    32   0.64 
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z79598-5|CAB01863.1|  367|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U21317-6|AAA62527.1|  313|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U88184-7|AAK31516.1|  576|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AL023834-1|CAA19481.1|  177|Caenorhabditis elegans Hypothetical ...    29   4.5  
AF077536-4|AAK31409.1|  726|Caenorhabditis elegans Hypothetical ...    29   4.5  
U23484-7|ABB88232.1|  738|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z77652-1|CAB01121.1|  254|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>U89792-1|AAB94380.1|  339|Caenorhabditis elegans seven-in-absentia 
           protein homologue-1 protein.
          Length = 339

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/69 (33%), Positives = 30/69 (43%)
 Frame = +3

Query: 159 ITYFXCPVCYEIPTGHIFQCXEGHNVCGRCKVRLSVCPVCRALFFGTXXYAMEELIANVR 338
           ++ F CPVC E       QC  GH VC  C+ +L  CP CR          +E++   VR
Sbjct: 85  LSVFECPVCLEYMLPPYMQCSSGHLVCSNCRPKLQCCPTCRGPTPSVRNLGLEKIANTVR 144

Query: 339 KLRAFKLGG 365
               F   G
Sbjct: 145 FPCKFSTSG 153


>AC024759-5|AAK68432.1|  419|Caenorhabditis elegans Hypothetical
           protein Y37E11AR.2 protein.
          Length = 419

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/69 (33%), Positives = 30/69 (43%)
 Frame = +3

Query: 159 ITYFXCPVCYEIPTGHIFQCXEGHNVCGRCKVRLSVCPVCRALFFGTXXYAMEELIANVR 338
           ++ F CPVC E       QC  GH VC  C+ +L  CP CR          +E++   VR
Sbjct: 151 LSVFECPVCLEYMLPPYMQCSSGHLVCSNCRPKLQCCPTCRGPTPSVRNLGLEKIANTVR 210

Query: 339 KLRAFKLGG 365
               F   G
Sbjct: 211 FPCKFSTSG 219


>Z70681-2|CAA94578.2|  203|Caenorhabditis elegans Hypothetical
           protein C30F2.2 protein.
          Length = 203

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
 Frame = +3

Query: 159 ITYFXCPVCYEIPTGHIFQ-CXE--GHNVCGRCKVRLSVCPVCRA--LFFGT-XXYAMEE 320
           + +  CP C E    +  + C    GH++C +C+ ++  CP+C+    FFGT   Y + +
Sbjct: 5   VDFSRCPTCLEDYDDNSHRPCVGFCGHSICLKCQSKIVSCPLCKRKNAFFGTVINYQLLD 64

Query: 321 LIANVRKL 344
               +R+L
Sbjct: 65  SCLAIRQL 72


>U21308-5|AAB93318.1|  258|Caenorhabditis elegans Warthog
           (hedgehog-like family)protein 10 protein.
          Length = 258

 Score = 31.9 bits (69), Expect = 0.64
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = +3

Query: 399 SSTPARDSGSDNAEYLGEDENNDNQNSVVAPNPCKGLFRCLCCKNGNSIRLPAARLLNHL 578
           ++TP  +  ++ AE L ED+ NDN+  +V  N  + +      +       PA +  N L
Sbjct: 182 TTTPTVEEEAEEAEQLEEDQPNDNEAEIVESNDEEEVVEEETEEEEEVTTTPAPKPFNPL 241

Query: 579 RY 584
           RY
Sbjct: 242 RY 243


>AF164625-1|AAD47816.1|  944|Caenorhabditis elegans
           tandem-array-modifier protein protein.
          Length = 944

 Score = 31.9 bits (69), Expect = 0.64
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +3

Query: 141 TNCQTWITYFXCPVCYEIPTGHIFQCXEGHNVCGRCKVRL 260
           +N Q W     CP+CY I      Q   GH +C  C  RL
Sbjct: 10  SNYQQWAHVVECPICYNI-YDKPMQMGCGHTLCSTCIGRL 48


>AF022974-6|AAC48041.1|  944|Caenorhabditis elegans Tandem array
           expression modifierprotein 1 protein.
          Length = 944

 Score = 31.9 bits (69), Expect = 0.64
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +3

Query: 141 TNCQTWITYFXCPVCYEIPTGHIFQCXEGHNVCGRCKVRL 260
           +N Q W     CP+CY I      Q   GH +C  C  RL
Sbjct: 10  SNYQQWAHVVECPICYNI-YDKPMQMGCGHTLCSTCIGRL 48


>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical
           protein T13H2.5a protein.
          Length = 2471

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 5/49 (10%)
 Frame = +3

Query: 150 QTWITYFXCPVCYEIPTGHIFQCXEGHNVCGRCKVRL-----SVCPVCR 281
           Q  I  F C VC E+  G I     GH  C +C +       + CP CR
Sbjct: 154 QKVIGSFSCDVCQELIQGSIMTKKCGHRFCDQCILVAFMRSGNTCPTCR 202


>Z79598-5|CAB01863.1|  367|Caenorhabditis elegans Hypothetical
           protein C44H4.6 protein.
          Length = 367

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +3

Query: 579 RYFHSPELLEGRAEGGEYLQAWQISTTLGKLV--TAIKISNMGIFFLTIEI 725
           RY+ +PEL+ G       +  W + T +G+L+  + I +++  +  L ++I
Sbjct: 197 RYYRAPELIFGSKNYDTSIDTWSVGTVVGELLHNSPIFLADSAVDILALQI 247


>U21317-6|AAA62527.1|  313|Caenorhabditis elegans Hypothetical
           protein B0495.8a protein.
          Length = 313

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 22/55 (40%), Positives = 27/55 (49%)
 Frame = +3

Query: 312 MEELIANVRKLRAFKLGGKVTRGLLASDSSSTPARDSGSDNAEYLGEDENNDNQN 476
           M+E I   RK R  KLG +  RG    +S     RD G D  EY G D + D +N
Sbjct: 229 MKETIDERRKEREEKLGSQ--RGYQRRESYGR--RDRGGDRGEYRG-DRDRDRRN 278


>U88184-7|AAK31516.1|  576|Caenorhabditis elegans Hypothetical
           protein F36H5.5 protein.
          Length = 576

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = +3

Query: 666 KLVTAIKISNMGIFFLTIEIFSDNILYAWLTMAASPWVANGFSYT 800
           K+ TA K S M +F +  EIF   + +  L   A  +VA+GF YT
Sbjct: 507 KITTAQKAS-MVLFLVISEIFYIGLSFLDLDPLADEYVASGFFYT 550


>AL023834-1|CAA19481.1|  177|Caenorhabditis elegans Hypothetical
           protein Y32B12A.1 protein.
          Length = 177

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = +3

Query: 174 CPVCYEIPTGHIFQC--XEGHNVCGRCKVR 257
           C  CY   TGH F+C     +++C  C+ R
Sbjct: 135 CDSCYTTITGHRFKCTICTDYDICSSCEAR 164


>AF077536-4|AAK31409.1|  726|Caenorhabditis elegans Hypothetical
           protein C16A11.3 protein.
          Length = 726

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
 Frame = +3

Query: 345 RAFKLGGKVTRGLLASDSSSTPA--RDSGSDNAEYLGEDENNDNQNSVVAPNPCKGLFRC 518
           + FK   K TR     + S      R S +DN    G  EN   +N ++  +   G    
Sbjct: 336 KTFKFQMKRTRAPKEQNPSEIKKIRRKSETDNENVAGNRENLP-KNPILTSS---GAQLK 391

Query: 519 LCCKNGNSIRLPAARLLNHLRYFHSPELL-EGRAEGGEYLQAWQISTTLGKLVTAIKISN 695
           +  K G  +     ++++H    ++ +L  E  +E GE  Q+W   T + K VTAI  +N
Sbjct: 392 IIAKLGEGVFGAVYKVVDHSNKKYAVKLFKEEHSEVGE--QSWARETAIMKAVTAINSAN 449

Query: 696 M 698
           +
Sbjct: 450 L 450


>U23484-7|ABB88232.1|  738|Caenorhabditis elegans Hypothetical
           protein EEED8.10a protein.
          Length = 738

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 757 VNQAYKILSENISMVKKNMPMFEIL 683
           +N+ YKI  EN+SM+ + M    IL
Sbjct: 450 INECYKITDENLSMIARRMEDLSIL 474


>Z77652-1|CAB01121.1|  254|Caenorhabditis elegans Hypothetical
           protein C06B3.1 protein.
          Length = 254

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = +3

Query: 672 VTAIKISNM---GIFFLTIEIFSDNILYAWLTMAASPWVANGFSYTVTI 809
           V+ I I N+   G+F +++  F+ + +Y +L +    WV N   Y +TI
Sbjct: 86  VSFIYIMNLMLCGMFGMSMAFFALHFIYRYLVITGHEWVKNVSFYKLTI 134


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,005,608
Number of Sequences: 27780
Number of extensions: 417445
Number of successful extensions: 1005
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)