Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_P23
         (1024 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...    64   4e-09
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...    63   1e-08
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi...    62   2e-08
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h...    49   2e-04
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ...    37   0.96 
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ...    35   3.9  

>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score = 64.5 bits (150), Expect = 4e-09
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = +1

Query: 712 RCWRVTIGSAPLTSVTKIDAXVRGGXTRQDYKDTRXYP 825
           RC R +IGSAPLTS+TKIDA VRGG TRQDYKDTR +P
Sbjct: 13  RC-RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFP 49


>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score = 62.9 bits (146), Expect = 1e-08
 Identities = 41/87 (47%), Positives = 46/87 (52%)
 Frame = +1

Query: 565 TRCARSFGCGEXGXVTXRR*YGXPRNXGXTQERTCXXKAXQRPXTVKRPRCWRVTIGSAP 744
           TR ARSFGCGE         Y      G   E T   K   +     RPR  R +IGSAP
Sbjct: 43  TRYARSFGCGER--------YRLTDGDGNFLEDT--RKTLSKEEI--RPRRSRFSIGSAP 90

Query: 745 LTSVTKIDAXVRGGXTRQDYKDTRXYP 825
           LTS+ K DA + GG TRQDYKD R +P
Sbjct: 91  LTSIAKSDAQISGGETRQDYKDPRRFP 117


>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
           organisms|Rep: Predicted protein - Nematostella
           vectensis
          Length = 97

 Score = 62.1 bits (144), Expect = 2e-08
 Identities = 28/42 (66%), Positives = 33/42 (78%)
 Frame = +1

Query: 700 VKRPRCWRVTIGSAPLTSVTKIDAXVRGGXTRQDYKDTRXYP 825
           V+ PR  R +IGSAPLTS+TK DA + GG TRQDYKDTR +P
Sbjct: 44  VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFP 85


>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
           Alpha-hemolysin - Aeromonas hydrophila
          Length = 59

 Score = 49.2 bits (112), Expect = 2e-04
 Identities = 25/34 (73%), Positives = 26/34 (76%)
 Frame = +3

Query: 567 SLRSVVRLRXXGXGHSXAVIRXSTQSGDXAGKNM 668
           SLRSVVRLR     HS AVIR ST+SGD AGKNM
Sbjct: 26  SLRSVVRLRRAVSAHSKAVIRLSTESGDNAGKNM 59


>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
           root|Rep: Putative uncharacterized protein - Escherichia
           coli
          Length = 61

 Score = 36.7 bits (81), Expect = 0.96
 Identities = 20/42 (47%), Positives = 21/42 (50%)
 Frame = -2

Query: 690 PLXGLXXTCSFLRXPXIAWXTVLXXXXXXXPLXAAERPSAAS 565
           P+     TCSF   P I W TVL       PL A ERPS AS
Sbjct: 19  PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERPSVAS 60


>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
           Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. SS
          Length = 114

 Score = 34.7 bits (76), Expect = 3.9
 Identities = 19/64 (29%), Positives = 27/64 (42%)
 Frame = +1

Query: 634 PRNXGXTQERTCXXKAXQRPXTVKRPRCWRVTIGSAPLTSVTKIDAXVRGGXTRQDYKDT 813
           PRN     +R     + Q P T            S PLT++TKI    +   T+ +YK T
Sbjct: 39  PRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYT 98

Query: 814 RXYP 825
             +P
Sbjct: 99  TPFP 102


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,532,175
Number of Sequences: 1657284
Number of extensions: 8288725
Number of successful extensions: 11187
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11175
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 97572067153
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)