Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_P19
         (939 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   0.22 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   3.3  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect(2) = 0.22
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +2

Query: 716 GPPPPPPP 739
           GPPPPPPP
Sbjct: 529 GPPPPPPP 536



 Score = 25.4 bits (53), Expect = 2.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 722 PPPPPPXXPXP 754
           PPPPPP  P P
Sbjct: 585 PPPPPPMGPPP 595



 Score = 24.2 bits (50), Expect = 5.8
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 719 PPPPPPPXXPXPP 757
           PPP PPP  P  P
Sbjct: 581 PPPAPPPPPPMGP 593



 Score = 24.2 bits (50), Expect = 5.8
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 719 PPPPPPPXXPXPP 757
           PP PPPP    PP
Sbjct: 582 PPAPPPPPPMGPP 594



 Score = 24.2 bits (50), Expect = 5.8
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 719 PPPPPPPXXPXPP 757
           P PPPPP    PP
Sbjct: 583 PAPPPPPPMGPPP 595



 Score = 24.2 bits (50), Expect = 5.8
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 719 PPPPPPPXXPXPP 757
           PPPPPP   P  P
Sbjct: 585 PPPPPPMGPPPSP 597



 Score = 21.0 bits (42), Expect(2) = 0.22
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +2

Query: 719 PPPPPPPXXPXPP 757
           P   PPP  P PP
Sbjct: 577 PNAQPPPAPPPPP 589


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 716 GPPPPPPPXXP 748
           G PPPPPP  P
Sbjct: 781 GSPPPPPPPPP 791



 Score = 24.6 bits (51), Expect = 4.4
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 719 PPPPPPPXXPXPP 757
           PPPPPPP     P
Sbjct: 784 PPPPPPPPSSLSP 796


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 403,077
Number of Sequences: 2352
Number of extensions: 4533
Number of successful extensions: 29
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102535848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)