Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_P16
         (962 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    33   0.010
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            32   0.022
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    26   1.5  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            24   7.9  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 33.5 bits (73), Expect = 0.010
 Identities = 32/130 (24%), Positives = 40/130 (30%), Gaps = 1/130 (0%)
 Frame = +1

Query: 553 LRPPDXHHKNRXSTXRWRNPTGL*TYQPXPPETPSXALLVXTPARLPGIP*SXHXSPFPQ 732
           +RPP      R  T     P       P PP  P        P  +PG+       P P 
Sbjct: 192 MRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGM--QPGMQPRPP 249

Query: 733 SGAAXPXPXPPVGXPPP-PXXRPXXTQTXAVLPRNPXGSNPRXXGPXKPXNXXLXDSQXP 909
           S      P P +G PPP     P       + P+N   S     G   P    +      
Sbjct: 250 SAQGMQRP-PMMGQPPPIRPPNPMGGPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQGGA 308

Query: 910 PRHPTKDARP 939
           P  P +  RP
Sbjct: 309 PGGPPQGMRP 318



 Score = 28.7 bits (61), Expect = 0.28
 Identities = 27/107 (25%), Positives = 33/107 (30%), Gaps = 4/107 (3%)
 Frame = +1

Query: 631 QPXPPETPSXALLVXTPARLPGIP*SXHXSPFPQSGAAXPXPXPPVGXP---PPPXXRPX 801
           Q  P +  +   L   P      P +   +PF     A P P  P G     PP    P 
Sbjct: 143 QQHPHQRDTGPALFPAPISHRPPPIAHQQAPFAMD-PARPNPGMPPGPQMMRPPGNVGPP 201

Query: 802 XTQTXAV-LPRNPXGSNPRXXGPXKPXNXXLXDSQXPPRHPTKDARP 939
            T T     P  P G  P+  G   P    +     P   P    RP
Sbjct: 202 RTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRP 248


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 32.3 bits (70), Expect = 0.022
 Identities = 24/82 (29%), Positives = 27/82 (32%), Gaps = 9/82 (10%)
 Frame = +1

Query: 634 PXPPETPSXALLVXTPA---------RLPGIP*SXHXSPFPQSGAAXPXPXPPVGXPPPP 786
           P PP  P  A+L   P          R P  P +     FP      P   PP   PPPP
Sbjct: 530 PPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPP 589

Query: 787 XXRPXXTQTXAVLPRNPXGSNP 852
              P  +         P GS P
Sbjct: 590 PMGPPPSPLAGGPLGGPAGSRP 611


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +1

Query: 679 PARLPGIP*SXHXSPFPQSGAAXPXPXPPVGXPPPPXXRP 798
           P  +PG+P     +P    G   P P P +G  PPP   P
Sbjct: 89  PGMIPGMP----GAPPLLMGPNGPLPPPMMGMRPPPMMVP 124


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.8 bits (49), Expect = 7.9
 Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
 Frame = +1

Query: 733 SGAAXPXPXPPV--GXPPPP 786
           SGA  P   PPV    PPPP
Sbjct: 739 SGAGGPSSSPPVMESIPPPP 758


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,011
Number of Sequences: 2352
Number of extensions: 10318
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 105843456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)