Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_P14
(893 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046... 31 1.2
09_06_0095 + 20833313-20835073 31 1.6
03_05_0292 + 22846273-22846377,22847161-22847823 31 1.6
09_04_0197 - 15522167-15523524,15525416-15525683 30 2.2
03_02_0801 + 11343227-11343885,11344018-11344087,11344362-113444... 30 2.9
09_06_0040 - 20432008-20432091,20432152-20432229,20432322-204329... 29 3.8
08_02_1210 + 25314569-25314596,25315271-25315455,25315539-253156... 29 3.8
02_05_0968 + 33156585-33156941,33158510-33159902,33160035-331601... 29 5.0
01_06_0735 - 31579201-31579208,31579402-31579467,31580222-315803... 29 5.0
01_06_0597 - 30505800-30506021,30506135-30506566,30506673-30506819 29 5.0
06_01_0424 + 3041296-3041860,3042701-3042786,3042858-3043147,304... 29 6.6
02_03_0109 - 15333228-15334793,15335255-15335392,15335496-153357... 29 6.6
01_07_0260 - 42364769-42364777,42364884-42365354 29 6.6
07_03_0544 + 19309026-19310105 28 8.7
05_07_0195 - 28331445-28331641,28331841-28331934,28332019-283320... 28 8.7
05_05_0137 - 22641577-22642119 28 8.7
>02_03_0107 -
15303890-15304060,15304158-15304248,15304505-15304614,
15304715-15304784,15306365-15306558
Length = 211
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = +1
Query: 526 RESTGGRNRGREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLH*GEAASGLPAR 705
R+ST GR+ G DG + A A H G+ AAR + + R G A P R
Sbjct: 28 RQSTRGRSTGSGDGEESEALAAAVHAGKISREDAAARRMARTKQTARKSTGGKAPRKPLR 87
Query: 706 EV 711
+
Sbjct: 88 AI 89
>09_06_0095 + 20833313-20835073
Length = 586
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +2
Query: 587 QELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLEKSNVERRLAQKHMVDWIV 760
+EL +QA+KE +EAA + A +++ R Q K + +R +HM ++ +
Sbjct: 324 RELKVQARKEAEKFWIEAAATAKKAQALQDLEERYKQQFIKPSYDREDISEHMQEYFL 381
>03_05_0292 + 22846273-22846377,22847161-22847823
Length = 255
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Frame = +1
Query: 538 GGRNRGREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLH*GEAASGLPAREVE- 714
GG RGR G R G G ARG H GEAA+G AR +
Sbjct: 49 GGGGRGRGGGGGGRGDGARDGGGARGGGGRGARGGGGARGGGGRHGGEAATGAEARRLPD 108
Query: 715 -RGASS 729
RGA++
Sbjct: 109 VRGAAA 114
>09_04_0197 - 15522167-15523524,15525416-15525683
Length = 541
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 468 GWTRKLKRPRTNGTKVGTKP 527
G++++L RPR+NGT + TKP
Sbjct: 416 GFSQRLTRPRSNGTYLSTKP 435
>03_02_0801 +
11343227-11343885,11344018-11344087,11344362-11344433,
11344511-11344980,11345626-11346598
Length = 747
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -1
Query: 479 PCPTKRPTLVRISRELHTP*PTVTVRSNIRAPLH 378
PCPT VR+S + P PTV V S + AP H
Sbjct: 146 PCPT-----VRVSSAVGAPCPTVRVSSAVGAPCH 174
>09_06_0040 -
20432008-20432091,20432152-20432229,20432322-20432941,
20433042-20433108,20433276-20433291,20433781-20433887,
20433989-20434037,20435059-20435142,20435288-20435384,
20435914-20435985,20436075-20436435,20437864-20438259
Length = 676
Score = 29.5 bits (63), Expect = 3.8
Identities = 24/71 (33%), Positives = 27/71 (38%)
Frame = +1
Query: 538 GGRNRGREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLH*GEAASGLPAREVER 717
GGR RGR G R TG G E E G+ + A + GE L RE R
Sbjct: 28 GGRGRGRGRGVRWRCATGGGAGGGEVEEG-EGEGKREAAAWLSSAVGEKVDELLLREENR 86
Query: 718 GASSRPEAHGR 750
EA R
Sbjct: 87 ALVEGVEAAER 97
>08_02_1210 +
25314569-25314596,25315271-25315455,25315539-25315648,
25315756-25315909,25316213-25316237,25316566-25316756,
25316837-25316899,25317012-25317075,25318078-25318109
Length = 283
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 452 PKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQ 631
P L + +D+E+ E + G + K DAI EK +EL I K+ VLL+
Sbjct: 37 PNLHSNVDREIRQIEQQAYTGVLRAFKVQSDAITWEKESLITELRKELQISDKEHRVLLK 96
>02_05_0968 +
33156585-33156941,33158510-33159902,33160035-33160118,
33160216-33160265
Length = 627
Score = 29.1 bits (62), Expect = 5.0
Identities = 27/76 (35%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 526 RESTGGRNRGREDGAVARAGTGAPHPGQEGE-RAPAARGRLQGEAHVRLH*GEAASGLPA 702
R G RG +DGA AR G G +EG+ RGR + EA+ R L
Sbjct: 16 RAERSGAPRGDDDGADARGGGGEEEEEEEGDGDGGDVRGR-RYEAYTR----RRDERLRE 70
Query: 703 REVERGASSRPEAHGR 750
RE R R EA R
Sbjct: 71 REGWRARMERKEAEVR 86
>01_06_0735 -
31579201-31579208,31579402-31579467,31580222-31580307,
31580396-31580430,31580586-31580669,31580754-31580843,
31581267-31581304,31582042-31582108
Length = 157
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/78 (25%), Positives = 35/78 (44%)
Frame = +2
Query: 494 ENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYT 673
E E E + ++ E+ E E + + +G E LIQ + N++ +E + T
Sbjct: 39 EEEKEEEEDDIEESEEEESEDESEGKAKHKGTEGLIQIENPNLVKAKNIKAKEVDLGKTT 98
Query: 674 EVKRRLDYQLEKSNVERR 727
E+ RR ++EK R
Sbjct: 99 ELSRREREEIEKQKAHER 116
>01_06_0597 - 30505800-30506021,30506135-30506566,30506673-30506819
Length = 266
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 503 WNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERL 658
W G T A+ E E+T++W A E +Q + ++E +Y+ +L
Sbjct: 28 WRHGAPPTYDAVNSLFEAERTQEWPAGSLEETVQNAIKT--WEMELSYKAKL 77
>06_01_0424 +
3041296-3041860,3042701-3042786,3042858-3043147,
3043225-3043285,3043773-3043868,3044448-3044603,
3044811-3044987
Length = 476
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 476 KEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE-AAYRE 652
+E+E + NEG N+ K ++ EK + + E L A + N L+ E + RE
Sbjct: 337 REIECLHKQLNEGENKASKERSRRMKSEKLVKTLSSQVEQLRSANERNANLERELSECRE 396
Query: 653 R 655
R
Sbjct: 397 R 397
>02_03_0109 -
15333228-15334793,15335255-15335392,15335496-15335771,
15336357-15336422,15338140-15338487
Length = 797
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 142 SSASKQTACTALVARGSASDVATHDQKTFAR 234
++A K AC ALV+RG A+D + + AR
Sbjct: 630 AAAGKLEACRALVSRGGAADAGSETALSVAR 660
>01_07_0260 - 42364769-42364777,42364884-42365354
Length = 159
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 568 AVARAGTGAPHPGQEGERAPAA 633
A+A G GA G+EGE+ PAA
Sbjct: 132 AIAGCGAGAVDAGEEGEKRPAA 153
>07_03_0544 + 19309026-19310105
Length = 359
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +1
Query: 532 STGGRNRGREDGAVARAGTGAPHPGQEGERAP 627
+ G G GA A AG GAP P E R P
Sbjct: 21 AAGRSGGGGGGGAAAAAGAGAPDPRAEALRCP 52
>05_07_0195 -
28331445-28331641,28331841-28331934,28332019-28332099,
28332186-28332234,28332334-28332419,28332513-28332740,
28332819-28332857,28332958-28333047,28333207-28333269,
28333371-28333449,28333539-28333585,28333668-28333730,
28333814-28333864,28333977-28334060,28334162-28334226,
28334559-28334676,28334775-28334825,28335228-28335314,
28335633-28335712,28336676-28336793
Length = 589
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 340 CGSGNIPVQQGNLCNGARILLRTVTVGH 423
CG + PV++GN CNGA + GH
Sbjct: 542 CGVVSSPVRRGNYCNGATKQQKLYQNGH 569
>05_05_0137 - 22641577-22642119
Length = 180
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = +1
Query: 529 ESTGGRNRGRE-----DGAVARAGTGAPHPGQEGERAPAARGRL 645
E TGG++ GRE G + A H G+ RA RGR+
Sbjct: 7 EGTGGKHHGREVAMATRGRIPHAALAISHRGKSCVRARGRRGRI 50
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,647,683
Number of Sequences: 37544
Number of extensions: 480394
Number of successful extensions: 1805
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1805
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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