Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_P14
(893 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X60221-1|CAA42782.1| 256|Homo sapiens H+-ATP synthase subunit b... 172 2e-42
BC016350-1|AAH16350.1| 256|Homo sapiens ATP synthase, H+ transp... 171 2e-42
BC005366-1|AAH05366.1| 256|Homo sapiens ATP synthase, H+ transp... 171 2e-42
AY871272-1|AAX11428.1| 256|Homo sapiens cell proliferation-indu... 171 2e-42
AL390195-7|CAC36042.1| 256|Homo sapiens ATP synthase, H+ transp... 171 2e-42
AK223018-1|BAD96738.1| 256|Homo sapiens ATP synthase, H+ transp... 171 3e-42
BC005960-1|AAH05960.1| 256|Homo sapiens ATP synthase, H+ transp... 167 4e-41
AL390195-8|CAI15628.1| 195|Homo sapiens ATP synthase, H+ transp... 136 8e-32
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 36 0.26
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 36 0.26
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 36 0.26
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 36 0.26
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 36 0.26
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 36 0.26
BC131805-1|AAI31806.1| 913|Homo sapiens CCDC46 protein protein. 35 0.35
BC027930-1|AAH27930.1| 326|Homo sapiens death effector domain c... 34 0.80
AY125488-1|AAM95240.1| 321|Homo sapiens death effector domain-c... 34 0.80
AK075328-1|BAC11551.1| 326|Homo sapiens protein ( Homo sapiens ... 34 0.80
AF443591-1|AAL48220.1| 326|Homo sapiens death effector domain-c... 34 0.80
AF457575-1|AAM10835.1| 326|Homo sapiens death effector domain-c... 33 1.1
AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250... 33 1.8
AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associ... 33 1.8
AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome assoc... 33 1.8
BC119788-1|AAI19789.1| 626|Homo sapiens APOB48R protein protein. 32 2.4
BC119786-1|AAI19787.1| 1088|Homo sapiens apolipoprotein B48 rece... 32 2.4
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 32 2.4
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 32 2.4
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 32 2.4
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 32 2.4
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 32 2.4
AF141334-1|AAF78765.1| 1076|Homo sapiens placenta apolipoprotein... 32 2.4
AF141333-1|AAF76256.1| 1088|Homo sapiens apolipoprotein B48 rece... 32 2.4
AF141332-1|AAF76255.1| 1088|Homo sapiens apolipoprotein B48 rece... 32 2.4
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 32 2.4
BC112112-1|AAI12113.1| 656|Homo sapiens coiled-coil domain cont... 31 4.3
BC112108-1|AAI12109.1| 656|Homo sapiens hypothetical protein LO... 31 4.3
AL365330-1|CAI42526.1| 656|Homo sapiens novel protein protein. 31 4.3
AL136528-1|CAI19122.1| 656|Homo sapiens novel protein protein. 31 4.3
AK057387-1|BAB71462.1| 656|Homo sapiens protein ( Homo sapiens ... 31 4.3
BC036669-1|AAH36669.1| 496|Homo sapiens COL25A1 protein protein. 31 7.5
AK131255-1|BAD18434.1| 957|Homo sapiens protein ( Homo sapiens ... 31 7.5
AF293341-1|AAK35009.1| 642|Homo sapiens collagen-like Alzheimer... 31 7.5
AF293340-1|AAK35008.1| 654|Homo sapiens collagen-like Alzheimer... 31 7.5
J00116-1|AAA51997.1| 456|Homo sapiens COL2A1 protein. 30 9.9
BC113391-1|AAI13392.1| 839|Homo sapiens RBM25 protein protein. 30 9.9
BC113389-1|AAI13390.1| 839|Homo sapiens RBM25 protein protein. 30 9.9
BC063607-1|AAH63607.1| 586|Homo sapiens ATAD3A protein protein. 30 9.9
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 30 9.9
BC033109-1|AAH33109.1| 586|Homo sapiens ATAD3A protein protein. 30 9.9
BC014101-1|AAH14101.1| 586|Homo sapiens ATAD3A protein protein. 30 9.9
BC011814-1|AAH11814.1| 586|Homo sapiens ATAD3A protein protein. 30 9.9
BC007803-1|AAH07803.1| 586|Homo sapiens ATAD3A protein protein. 30 9.9
AL645728-10|CAI22955.1| 586|Homo sapiens ATPase family, AAA dom... 30 9.9
AL645728-9|CAI22953.1| 571|Homo sapiens ATPase family, AAA doma... 30 9.9
AL157945-2|CAI22068.1| 648|Homo sapiens ATPase family, AAA doma... 30 9.9
AK001571-1|BAA91764.1| 586|Homo sapiens protein ( Homo sapiens ... 30 9.9
AF343078-1|AAK38647.1| 578|Homo sapiens TOB3 protein. 30 9.9
AF109907-1|AAC97961.1| 735|Homo sapiens S164 protein. 30 9.9
AC004858-3|AAF19255.1| 784|Homo sapiens WUGSC:H_DJ0687K01.2 pro... 30 9.9
>X60221-1|CAA42782.1| 256|Homo sapiens H+-ATP synthase subunit b
protein.
Length = 256
Score = 172 bits (418), Expect = 2e-42
Identities = 86/199 (43%), Positives = 124/199 (62%), Gaps = 1/199 (0%)
Frame = +2
Query: 254 GKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVY 430
GKVR G IPEE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY
Sbjct: 52 GKVRYGLIPEEFFQFLYPKTGVTGPYVLGTGLVLYALSKEIYVISAETFTALSVLGVMVY 111
Query: 431 VAHVKFGPKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAK 610
K+GP +A + DK E + E + +++ +++AI+ EK++Q Q + L +
Sbjct: 112 -GIKKYGPFVADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQ 170
Query: 611 KENVLLQLEAAYRERLMYAYTEVKRRLDYQLEKSNVERRLAQKHMVDWIVXNVTKAITPD 790
+ N+ + LE YRERL Y EVK RLDY + N+ RR Q+HM++W+ +V ++I+
Sbjct: 171 RNNIAMALEVTYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQ 230
Query: 791 QXXQALDRCIADXASLAXK 847
Q + + +CIAD LA K
Sbjct: 231 QEKETIAKCIADLKLLAKK 249
>BC016350-1|AAH16350.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 171 bits (417), Expect = 2e-42
Identities = 86/199 (43%), Positives = 124/199 (62%), Gaps = 1/199 (0%)
Frame = +2
Query: 254 GKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVY 430
GKVR G IPEE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY
Sbjct: 52 GKVRYGLIPEEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY 111
Query: 431 VAHVKFGPKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAK 610
K+GP +A + DK E + E + +++ +++AI+ EK++Q Q + L +
Sbjct: 112 -GIKKYGPFVADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQ 170
Query: 611 KENVLLQLEAAYRERLMYAYTEVKRRLDYQLEKSNVERRLAQKHMVDWIVXNVTKAITPD 790
+ N+ + LE YRERL Y EVK RLDY + N+ RR Q+HM++W+ +V ++I+
Sbjct: 171 RNNIAMALEVTYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQ 230
Query: 791 QXXQALDRCIADXASLAXK 847
Q + + +CIAD LA K
Sbjct: 231 QEKETIAKCIADLKLLAKK 249
>BC005366-1|AAH05366.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 171 bits (417), Expect = 2e-42
Identities = 86/199 (43%), Positives = 124/199 (62%), Gaps = 1/199 (0%)
Frame = +2
Query: 254 GKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVY 430
GKVR G IPEE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY
Sbjct: 52 GKVRYGLIPEEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY 111
Query: 431 VAHVKFGPKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAK 610
K+GP +A + DK E + E + +++ +++AI+ EK++Q Q + L +
Sbjct: 112 -GIKKYGPFVADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQ 170
Query: 611 KENVLLQLEAAYRERLMYAYTEVKRRLDYQLEKSNVERRLAQKHMVDWIVXNVTKAITPD 790
+ N+ + LE YRERL Y EVK RLDY + N+ RR Q+HM++W+ +V ++I+
Sbjct: 171 RNNIAMALEVTYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQ 230
Query: 791 QXXQALDRCIADXASLAXK 847
Q + + +CIAD LA K
Sbjct: 231 QEKETIAKCIADLKLLAKK 249
>AY871272-1|AAX11428.1| 256|Homo sapiens cell
proliferation-inducing protein 47 protein.
Length = 256
Score = 171 bits (417), Expect = 2e-42
Identities = 86/199 (43%), Positives = 124/199 (62%), Gaps = 1/199 (0%)
Frame = +2
Query: 254 GKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVY 430
GKVR G IPEE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY
Sbjct: 52 GKVRYGLIPEEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY 111
Query: 431 VAHVKFGPKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAK 610
K+GP +A + DK E + E + +++ +++AI+ EK++Q Q + L +
Sbjct: 112 -GIKKYGPFVADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQ 170
Query: 611 KENVLLQLEAAYRERLMYAYTEVKRRLDYQLEKSNVERRLAQKHMVDWIVXNVTKAITPD 790
+ N+ + LE YRERL Y EVK RLDY + N+ RR Q+HM++W+ +V ++I+
Sbjct: 171 RNNIAMALEVTYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQ 230
Query: 791 QXXQALDRCIADXASLAXK 847
Q + + +CIAD LA K
Sbjct: 231 QEKETIAKCIADLKLLAKK 249
>AL390195-7|CAC36042.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 171 bits (417), Expect = 2e-42
Identities = 86/199 (43%), Positives = 124/199 (62%), Gaps = 1/199 (0%)
Frame = +2
Query: 254 GKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVY 430
GKVR G IPEE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY
Sbjct: 52 GKVRYGLIPEEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY 111
Query: 431 VAHVKFGPKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAK 610
K+GP +A + DK E + E + +++ +++AI+ EK++Q Q + L +
Sbjct: 112 -GIKKYGPFVADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQ 170
Query: 611 KENVLLQLEAAYRERLMYAYTEVKRRLDYQLEKSNVERRLAQKHMVDWIVXNVTKAITPD 790
+ N+ + LE YRERL Y EVK RLDY + N+ RR Q+HM++W+ +V ++I+
Sbjct: 171 RNNIAMALEVTYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQ 230
Query: 791 QXXQALDRCIADXASLAXK 847
Q + + +CIAD LA K
Sbjct: 231 QEKETIAKCIADLKLLAKK 249
>AK223018-1|BAD96738.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit b
isoform 1 pr protein.
Length = 256
Score = 171 bits (416), Expect = 3e-42
Identities = 86/199 (43%), Positives = 124/199 (62%), Gaps = 1/199 (0%)
Frame = +2
Query: 254 GKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVY 430
GKVR G IPEE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY
Sbjct: 52 GKVRYGLIPEEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY 111
Query: 431 VAHVKFGPKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAK 610
K+GP +A + DK E + E + +++ +++AI+ EK++Q Q + L +
Sbjct: 112 -GIKKYGPFVADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQ 170
Query: 611 KENVLLQLEAAYRERLMYAYTEVKRRLDYQLEKSNVERRLAQKHMVDWIVXNVTKAITPD 790
+ N+ + LE YRERL Y EVK RLDY + N+ RR Q+HM++W+ +V ++I+
Sbjct: 171 RNNIAMALEVTYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVGKHVVQSISTQ 230
Query: 791 QXXQALDRCIADXASLAXK 847
Q + + +CIAD LA K
Sbjct: 231 QEKETIAKCIADLKLLAKK 249
>BC005960-1|AAH05960.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 167 bits (407), Expect = 4e-41
Identities = 84/199 (42%), Positives = 123/199 (61%), Gaps = 1/199 (0%)
Frame = +2
Query: 254 GKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVY 430
GKVR G IPEE+FQF + KTGVTGPY G GL Y SK IYV+ E ++ LS+L VMVY
Sbjct: 52 GKVRYGLIPEEFFQFLYPKTGVTGPYVLGTGLILYALSKGIYVISAETFTALSVLGVMVY 111
Query: 431 VAHVKFGPKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAK 610
K+GP +A + DK E + E + +++ +++AI+ EK++Q Q + L +
Sbjct: 112 -GIKKYGPFVADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQ 170
Query: 611 KENVLLQLEAAYRERLMYAYTEVKRRLDYQLEKSNVERRLAQKHMVDWIVXNVTKAITPD 790
+ N+ + LE YRERL Y EV+ RLDY + N+ RR Q+HM++W+ +V ++I+
Sbjct: 171 RNNIAMALEVTYRERLYRVYKEVRNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQ 230
Query: 791 QXXQALDRCIADXASLAXK 847
Q + + +CIAD LA K
Sbjct: 231 QEKETIAKCIADLKLLAKK 249
>AL390195-8|CAI15628.1| 195|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 195
Score = 136 bits (330), Expect = 8e-32
Identities = 70/182 (38%), Positives = 106/182 (58%), Gaps = 1/182 (0%)
Frame = +2
Query: 305 SKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPKLAAWLDKE 481
S GPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP +A + DK
Sbjct: 8 SAAATAGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVYGIK-KYGPFVADFADKL 66
Query: 482 VEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLM 661
E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE YRERL
Sbjct: 67 NEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLY 126
Query: 662 YAYTEVKRRLDYQLEKSNVERRLAQKHMVDWIVXNVTKAITPDQXXQALDRCIADXASLA 841
Y EVK RLDY + N+ RR Q+HM++W+ +V ++I+ Q + + +CIAD LA
Sbjct: 127 RVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKCIADLKLLA 186
Query: 842 XK 847
K
Sbjct: 187 KK 188
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 35.5 bits (78), Expect = 0.26
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Frame = +1
Query: 523 NRESTGGRNRGREDGAV---ARAGTGAPHPGQEGERAPAARGRLQGEAHVRLH*GEAASG 693
+R T R R R V +R+ + A G+ R PA RGR + R G + S
Sbjct: 615 SRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARR--GRSRSR 672
Query: 694 LPAREVERGASSRPEAHGRLDSXQRDQG 777
PAR R S P GR S +G
Sbjct: 673 TPARRSGRSRSRTPARRGRSRSRTPRRG 700
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 35.5 bits (78), Expect = 0.26
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Frame = +1
Query: 523 NRESTGGRNRGREDGAV---ARAGTGAPHPGQEGERAPAARGRLQGEAHVRLH*GEAASG 693
+R T R R R V +R+ + A G+ R PA RGR + R G + S
Sbjct: 615 SRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARR--GRSRSR 672
Query: 694 LPAREVERGASSRPEAHGRLDSXQRDQG 777
PAR R S P GR S +G
Sbjct: 673 TPARRSGRSRSRTPARRGRSRSRTPRRG 700
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 35.5 bits (78), Expect = 0.26
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Frame = +1
Query: 523 NRESTGGRNRGREDGAV---ARAGTGAPHPGQEGERAPAARGRLQGEAHVRLH*GEAASG 693
+R T R R R V +R+ + A G+ R PA RGR + R G + S
Sbjct: 615 SRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARR--GRSRSR 672
Query: 694 LPAREVERGASSRPEAHGRLDSXQRDQG 777
PAR R S P GR S +G
Sbjct: 673 TPARRSGRSRSRTPARRGRSRSRTPRRG 700
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 35.5 bits (78), Expect = 0.26
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Frame = +1
Query: 523 NRESTGGRNRGREDGAV---ARAGTGAPHPGQEGERAPAARGRLQGEAHVRLH*GEAASG 693
+R T R R R V +R+ + A G+ R PA RGR + R G + S
Sbjct: 580 SRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARR--GRSRSR 637
Query: 694 LPAREVERGASSRPEAHGRLDSXQRDQG 777
PAR R S P GR S +G
Sbjct: 638 TPARRSGRSRSRTPARRGRSRSRTPRRG 665
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 35.5 bits (78), Expect = 0.26
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Frame = +1
Query: 523 NRESTGGRNRGREDGAV---ARAGTGAPHPGQEGERAPAARGRLQGEAHVRLH*GEAASG 693
+R T R R R V +R+ + A G+ R PA RGR + R G + S
Sbjct: 405 SRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARR--GRSRSR 462
Query: 694 LPAREVERGASSRPEAHGRLDSXQRDQG 777
PAR R S P GR S +G
Sbjct: 463 TPARRSGRSRSRTPARRGRSRSRTPRRG 490
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 35.5 bits (78), Expect = 0.26
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Frame = +1
Query: 523 NRESTGGRNRGREDGAV---ARAGTGAPHPGQEGERAPAARGRLQGEAHVRLH*GEAASG 693
+R T R R R V +R+ + A G+ R PA RGR + R G + S
Sbjct: 663 SRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARR--GRSRSR 720
Query: 694 LPAREVERGASSRPEAHGRLDSXQRDQG 777
PAR R S P GR S +G
Sbjct: 721 TPARRSGRSRSRTPARRGRSRSRTPRRG 748
>BC131805-1|AAI31806.1| 913|Homo sapiens CCDC46 protein protein.
Length = 913
Score = 35.1 bits (77), Expect = 0.35
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 473 DKEVEATENEWNEGRNQTVKALEDAIEGEKTE-QWRAQGQELLIQAKKENVLLQLEAAYR 649
D ++EA N WN G + K +E EK + Q + I +K N + +L+ YR
Sbjct: 201 DSDIEARLNSWNLGLDMKTKMMEAKFHEEKLKLQQKHDADVQKILERKNNEIEELKTLYR 260
Query: 650 ERLMYAYTEVKRRLDYQLE 706
+ + E R+L+ +++
Sbjct: 261 SK-QHETEETIRKLEKKVQ 278
>BC027930-1|AAH27930.1| 326|Homo sapiens death effector domain
containing 2 protein.
Length = 326
Score = 33.9 bits (74), Expect = 0.80
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 544 RNRGREDGAVARAGTGAP-HPGQEGERA-PAARGRLQGEAHVRLH*GEAASGLPAREVER 717
R+RGR G R GAP P Q+ E A P++ G++ + +R+ E PA E +
Sbjct: 159 RSRGRPSGGARRRRRGAPAAPQQQSEPARPSSEGKVTCDIRLRVR-AEYCEHGPALE-QG 216
Query: 718 GASSRPEAHGR 750
AS RP+A R
Sbjct: 217 VASRRPQALAR 227
>AY125488-1|AAM95240.1| 321|Homo sapiens death effector
domain-containing DNA-binding 2 protein protein.
Length = 321
Score = 33.9 bits (74), Expect = 0.80
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 544 RNRGREDGAVARAGTGAP-HPGQEGERA-PAARGRLQGEAHVRLH*GEAASGLPAREVER 717
R+RGR G R GAP P Q+ E A P++ G++ + +R+ E PA E +
Sbjct: 154 RSRGRPSGGARRRRRGAPAAPQQQSEPARPSSEGKVTCDIRLRVR-AEYCEHGPALE-QG 211
Query: 718 GASSRPEAHGR 750
AS RP+A R
Sbjct: 212 VASRRPQALAR 222
>AK075328-1|BAC11551.1| 326|Homo sapiens protein ( Homo sapiens
cDNA PSEC0004 fis, clone NT2RM1000558, moderately
similar to Death effector domain-containing DNA binding
protein 2. ).
Length = 326
Score = 33.9 bits (74), Expect = 0.80
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 544 RNRGREDGAVARAGTGAP-HPGQEGERA-PAARGRLQGEAHVRLH*GEAASGLPAREVER 717
R+RGR G R GAP P Q+ E A P++ G++ + +R+ E PA E +
Sbjct: 159 RSRGRPSGGARRRRRGAPAAPQQQSEPARPSSEGKVTCDIRLRVR-AEYCEHGPALE-QG 216
Query: 718 GASSRPEAHGR 750
AS RP+A R
Sbjct: 217 VASRRPQALAR 227
>AF443591-1|AAL48220.1| 326|Homo sapiens death effector
domain-containing DNA-binding protein 2 protein.
Length = 326
Score = 33.9 bits (74), Expect = 0.80
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 544 RNRGREDGAVARAGTGAP-HPGQEGERA-PAARGRLQGEAHVRLH*GEAASGLPAREVER 717
R+RGR G R GAP P Q+ E A P++ G++ + +R+ E PA E +
Sbjct: 159 RSRGRPSGGARRRRRGAPAAPQQQSEPARPSSEGKVTCDIRLRVR-AEYCEHGPALE-QG 216
Query: 718 GASSRPEAHGR 750
AS RP+A R
Sbjct: 217 VASRRPQALAR 227
>AF457575-1|AAM10835.1| 326|Homo sapiens death effector
domain-containing protein FLAME-3 protein.
Length = 326
Score = 33.5 bits (73), Expect = 1.1
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 544 RNRGREDGAVARAGTGAP-HPGQEGERA-PAARGRLQGEAHVRLH*GEAASGLPAREVER 717
R+RGR G R GAP P Q+ E A P++ G++ + +R+ E PA E +
Sbjct: 159 RSRGRPSGGARRRRRGAPAAPQQQSEPARPSSEGKVTCDIRLRVR-AEYREHGPALE-QG 216
Query: 718 GASSRPEAHGR 750
AS RP+A R
Sbjct: 217 VASRRPQALAR 227
>AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250kDa
protein.
Length = 2442
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +2
Query: 467 WLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 637
W K+ + E+E E ++T+ +L+ + + ++ AQG+ L+QA KEN+ Q+E
Sbjct: 1304 WEGKQ-NSLESELME-LHETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVE 1358
>AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associated
protein 1 protein.
Length = 2442
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +2
Query: 467 WLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 637
W K+ + E+E E ++T+ +L+ + + ++ AQG+ L+QA KEN+ Q+E
Sbjct: 1304 WEGKQ-NSLESELME-LHETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVE 1358
>AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome associated
protein protein.
Length = 2442
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +2
Query: 467 WLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 637
W K+ + E+E E ++T+ +L+ + + ++ AQG+ L+QA KEN+ Q+E
Sbjct: 1304 WEGKQ-NSLESELME-LHETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVE 1358
>BC119788-1|AAI19789.1| 626|Homo sapiens APOB48R protein protein.
Length = 626
Score = 32.3 bits (70), Expect = 2.4
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 7/144 (4%)
Frame = +2
Query: 248 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 427
E + G + EW HS T GP G +E E E L+L
Sbjct: 67 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 126
Query: 428 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEQWRAQGQE 592
++ GP+ A + E EA W + ++ EDA +GE + E+ A GQ
Sbjct: 127 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 186
Query: 593 LLIQAK--KENVLLQLEAAYRERL 658
L +A+ +E+ L ++ A E L
Sbjct: 187 LAAEAEGDRESELSEVPEAGGEGL 210
>BC119786-1|AAI19787.1| 1088|Homo sapiens apolipoprotein B48
receptor protein.
Length = 1088
Score = 32.3 bits (70), Expect = 2.4
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 7/144 (4%)
Frame = +2
Query: 248 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 427
E + G + EW HS T GP G +E E E L+L
Sbjct: 529 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 588
Query: 428 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEQWRAQGQE 592
++ GP+ A + E EA W + ++ EDA +GE + E+ A GQ
Sbjct: 589 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 648
Query: 593 LLIQAK--KENVLLQLEAAYRERL 658
L +A+ +E+ L ++ A E L
Sbjct: 649 LAAEAEGDRESELSEVPEAGGEGL 672
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 32.3 bits (70), Expect = 2.4
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -1
Query: 509 RSIRSRSLQLPCPTKRPTLVRISREL-HTP*PTVTVRSNIRAPLHRFPCCTGMLPDPHQK 333
RS R R + P P +R + VR R+ H+ P +S +P T LP+P K
Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229
Query: 332 CKDPSHQ 312
K+PS Q
Sbjct: 230 VKEPSVQ 236
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 32.3 bits (70), Expect = 2.4
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -1
Query: 509 RSIRSRSLQLPCPTKRPTLVRISREL-HTP*PTVTVRSNIRAPLHRFPCCTGMLPDPHQK 333
RS R R + P P +R + VR R+ H+ P +S +P T LP+P K
Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229
Query: 332 CKDPSHQ 312
K+PS Q
Sbjct: 230 VKEPSVQ 236
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 32.3 bits (70), Expect = 2.4
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -1
Query: 509 RSIRSRSLQLPCPTKRPTLVRISREL-HTP*PTVTVRSNIRAPLHRFPCCTGMLPDPHQK 333
RS R R + P P +R + VR R+ H+ P +S +P T LP+P K
Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229
Query: 332 CKDPSHQ 312
K+PS Q
Sbjct: 230 VKEPSVQ 236
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 32.3 bits (70), Expect = 2.4
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -1
Query: 509 RSIRSRSLQLPCPTKRPTLVRISREL-HTP*PTVTVRSNIRAPLHRFPCCTGMLPDPHQK 333
RS R R + P P +R + VR R+ H+ P +S +P T LP+P K
Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229
Query: 332 CKDPSHQ 312
K+PS Q
Sbjct: 230 VKEPSVQ 236
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 32.3 bits (70), Expect = 2.4
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -1
Query: 509 RSIRSRSLQLPCPTKRPTLVRISREL-HTP*PTVTVRSNIRAPLHRFPCCTGMLPDPHQK 333
RS R R + P P +R + VR R+ H+ P +S +P T LP+P K
Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229
Query: 332 CKDPSHQ 312
K+PS Q
Sbjct: 230 VKEPSVQ 236
>AF141334-1|AAF78765.1| 1076|Homo sapiens placenta apolipoprotein
B48 receptor type 2 protein.
Length = 1076
Score = 32.3 bits (70), Expect = 2.4
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 7/144 (4%)
Frame = +2
Query: 248 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 427
E + G + EW HS T GP G +E E E L+L
Sbjct: 529 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 588
Query: 428 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEQWRAQGQE 592
++ GP+ A + E EA W + ++ EDA +GE + E+ A GQ
Sbjct: 589 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 648
Query: 593 LLIQAK--KENVLLQLEAAYRERL 658
L +A+ +E+ L ++ A E L
Sbjct: 649 LAAEAEGDRESELSEVPEAGGEGL 672
>AF141333-1|AAF76256.1| 1088|Homo sapiens apolipoprotein B48
receptor protein.
Length = 1088
Score = 32.3 bits (70), Expect = 2.4
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 7/144 (4%)
Frame = +2
Query: 248 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 427
E + G + EW HS T GP G +E E E L+L
Sbjct: 529 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 588
Query: 428 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEQWRAQGQE 592
++ GP+ A + E EA W + ++ EDA +GE + E+ A GQ
Sbjct: 589 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 648
Query: 593 LLIQAK--KENVLLQLEAAYRERL 658
L +A+ +E+ L ++ A E L
Sbjct: 649 LAAEAEGDRESELSEVPEAGGEGL 672
>AF141332-1|AAF76255.1| 1088|Homo sapiens apolipoprotein B48
receptor protein.
Length = 1088
Score = 32.3 bits (70), Expect = 2.4
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 7/144 (4%)
Frame = +2
Query: 248 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 427
E + G + EW HS T GP G +E E E L+L
Sbjct: 529 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 588
Query: 428 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEQWRAQGQE 592
++ GP+ A + E EA W + ++ EDA +GE + E+ A GQ
Sbjct: 589 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 648
Query: 593 LLIQAK--KENVLLQLEAAYRERL 658
L +A+ +E+ L ++ A E L
Sbjct: 649 LAAEAEGDRESELSEVPEAGGEGL 672
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 32.3 bits (70), Expect = 2.4
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -1
Query: 509 RSIRSRSLQLPCPTKRPTLVRISREL-HTP*PTVTVRSNIRAPLHRFPCCTGMLPDPHQK 333
RS R R + P P +R + VR R+ H+ P +S +P T LP+P K
Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229
Query: 332 CKDPSHQ 312
K+PS Q
Sbjct: 230 VKEPSVQ 236
>BC112112-1|AAI12113.1| 656|Homo sapiens coiled-coil domain
containing 27 protein.
Length = 656
Score = 31.5 bits (68), Expect = 4.3
Identities = 23/95 (24%), Positives = 46/95 (48%)
Frame = +2
Query: 470 LDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYR 649
++ E E + E E R Q ++A+ D + ++ + QE++ +K+N LL+ + +
Sbjct: 460 INTENETLQKELRE-RRQQLQAMTDKFSNLREDK---KHQEMMGLIEKDNQLLRQQVSEL 515
Query: 650 ERLMYAYTEVKRRLDYQLEKSNVERRLAQKHMVDW 754
ER + V LD ++ + + L Q H+ W
Sbjct: 516 ERKLTKRDCVISELDTKVSQLQEQVELDQNHLQRW 550
>BC112108-1|AAI12109.1| 656|Homo sapiens hypothetical protein
LOC148870 protein.
Length = 656
Score = 31.5 bits (68), Expect = 4.3
Identities = 23/95 (24%), Positives = 46/95 (48%)
Frame = +2
Query: 470 LDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYR 649
++ E E + E E R Q ++A+ D + ++ + QE++ +K+N LL+ + +
Sbjct: 460 INTENETLQKELRE-RRQQLQAMTDKFSNLREDK---KHQEMMGLIEKDNQLLRQQVSEL 515
Query: 650 ERLMYAYTEVKRRLDYQLEKSNVERRLAQKHMVDW 754
ER + V LD ++ + + L Q H+ W
Sbjct: 516 ERKLTKRDCVISELDTKVSQLQEQVELDQNHLQRW 550
>AL365330-1|CAI42526.1| 656|Homo sapiens novel protein protein.
Length = 656
Score = 31.5 bits (68), Expect = 4.3
Identities = 23/95 (24%), Positives = 46/95 (48%)
Frame = +2
Query: 470 LDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYR 649
++ E E + E E R Q ++A+ D + ++ + QE++ +K+N LL+ + +
Sbjct: 460 INTENETLQKELRE-RRQQLQAMTDKFSNLREDK---KHQEMMGLIEKDNQLLRQQVSEL 515
Query: 650 ERLMYAYTEVKRRLDYQLEKSNVERRLAQKHMVDW 754
ER + V LD ++ + + L Q H+ W
Sbjct: 516 ERKLTKRDCVISELDTKVSQLQEQVELDQNHLQRW 550
>AL136528-1|CAI19122.1| 656|Homo sapiens novel protein protein.
Length = 656
Score = 31.5 bits (68), Expect = 4.3
Identities = 23/95 (24%), Positives = 46/95 (48%)
Frame = +2
Query: 470 LDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYR 649
++ E E + E E R Q ++A+ D + ++ + QE++ +K+N LL+ + +
Sbjct: 460 INTENETLQKELRE-RRQQLQAMTDKFSNLREDK---KHQEMMGLIEKDNQLLRQQVSEL 515
Query: 650 ERLMYAYTEVKRRLDYQLEKSNVERRLAQKHMVDW 754
ER + V LD ++ + + L Q H+ W
Sbjct: 516 ERKLTKRDCVISELDTKVSQLQEQVELDQNHLQRW 550
>AK057387-1|BAB71462.1| 656|Homo sapiens protein ( Homo sapiens
cDNA FLJ32825 fis, clone TESTI2003074, weakly similar to
TRICHOHYALIN. ).
Length = 656
Score = 31.5 bits (68), Expect = 4.3
Identities = 23/95 (24%), Positives = 46/95 (48%)
Frame = +2
Query: 470 LDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYR 649
++ E E + E E R Q ++A+ D + ++ + QE++ +K+N LL+ + +
Sbjct: 460 INTENETLQKELRE-RRQQLQAMTDKFSNLREDK---KHQEMMGLIEKDNQLLRQQVSEL 515
Query: 650 ERLMYAYTEVKRRLDYQLEKSNVERRLAQKHMVDW 754
ER + V LD ++ + + L Q H+ W
Sbjct: 516 ERKLTKRDCVISELDTKVSQLQEQVELDQNHLQRW 550
>BC036669-1|AAH36669.1| 496|Homo sapiens COL25A1 protein protein.
Length = 496
Score = 30.7 bits (66), Expect = 7.5
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 565 GAVARAGTGAP--HPGQEGERAPAARGRLQGEAHVRLH*GEAASGLPAREVERGASSRPE 738
GAV + G P PG++GE+ A +G+ + G +A+G+ E G S RP
Sbjct: 195 GAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKG---EPGESGRPG 251
Query: 739 AHG 747
G
Sbjct: 252 QKG 254
>AK131255-1|BAD18434.1| 957|Homo sapiens protein ( Homo sapiens
cDNA FLJ16186 fis, clone BRTHA2007060, moderately
similar to EUKARYOTIC TRANSLATION INITIATION FACTOR 3
SUBUNIT 10. ).
Length = 957
Score = 30.7 bits (66), Expect = 7.5
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +2
Query: 536 LEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLM--YAYTEVKRRLDYQLEK 709
L + E EK Q A+ + L +AK+E +EAAY++RL+ E +++ + +L K
Sbjct: 671 LRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQQRLVEERLLHEREQQQEVELSK 730
Query: 710 SNVERRLAQKHMVDWIVXN 766
E L +K + ++ N
Sbjct: 731 QRHEGDLKEKERLVRMMGN 749
>AF293341-1|AAK35009.1| 642|Homo sapiens collagen-like Alzheimer
amyloid plaque component precursor type II protein.
Length = 642
Score = 30.7 bits (66), Expect = 7.5
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 565 GAVARAGTGAP--HPGQEGERAPAARGRLQGEAHVRLH*GEAASGLPAREVERGASSRPE 738
GAV + G P PG++GE+ A +G+ + G +A+G+ E G S RP
Sbjct: 267 GAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKG---EPGESGRPG 323
Query: 739 AHG 747
G
Sbjct: 324 QKG 326
>AF293340-1|AAK35008.1| 654|Homo sapiens collagen-like Alzheimer
amyloid plaque component precursor type I protein.
Length = 654
Score = 30.7 bits (66), Expect = 7.5
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 565 GAVARAGTGAP--HPGQEGERAPAARGRLQGEAHVRLH*GEAASGLPAREVERGASSRPE 738
GAV + G P PG++GE+ A +G+ + G +A+G+ E G S RP
Sbjct: 267 GAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKG---EPGESGRPG 323
Query: 739 AHG 747
G
Sbjct: 324 QKG 326
>J00116-1|AAA51997.1| 456|Homo sapiens COL2A1 protein.
Length = 456
Score = 30.3 bits (65), Expect = 9.9
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +1
Query: 520 PNRESTGG--RNRGREDGAVARAGTGAPHPGQEGERAPAARGRLQGEA 657
P R+ G NRG E GAV GT P PG G P + +GEA
Sbjct: 15 PGRDGAAGVKGNRG-ETGAVGAPGTPGP-PGSPGPAGPTGKQGDRGEA 60
>BC113391-1|AAI13392.1| 839|Homo sapiens RBM25 protein protein.
Length = 839
Score = 30.3 bits (65), Expect = 9.9
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +2
Query: 473 DKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRE 652
++E E E + + E E +K ++ + K E L + EAAY+E
Sbjct: 396 EREREREREREREREREREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQE 455
Query: 653 RLM-YAYTEVKRRLDYQLEKSNVERR 727
RL + E K+ +Y+ E E R
Sbjct: 456 RLKNWEIRERKKTREYEKEAEREEER 481
>BC113389-1|AAI13390.1| 839|Homo sapiens RBM25 protein protein.
Length = 839
Score = 30.3 bits (65), Expect = 9.9
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +2
Query: 473 DKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRE 652
++E E E + + E E +K ++ + K E L + EAAY+E
Sbjct: 396 EREREREREREREREREREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQE 455
Query: 653 RLM-YAYTEVKRRLDYQLEKSNVERR 727
RL + E K+ +Y+ E E R
Sbjct: 456 RLKNWEIRERKKTREYEKEAEREEER 481
>BC063607-1|AAH63607.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 30.3 bits (65), Expect = 9.9
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 527 VKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLE 706
+K E A+E K+EQ RAQ +E +E Q A Y+++L E + + L
Sbjct: 93 LKEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLN 152
Query: 707 KSNVERR 727
+ N+ ++
Sbjct: 153 EENLRKQ 159
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.3 bits (65), Expect = 9.9
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -1
Query: 506 SIRSRSLQLPCPTKRPTLVRISREL-HTP*PTVTVRSNIRAPLHRFPCCTGMLPDPHQKC 330
S R R + P P +R + VR R+ H+ P +S +P T LP+P K
Sbjct: 171 SPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKV 230
Query: 329 KDPSHQ 312
K+PS Q
Sbjct: 231 KEPSVQ 236
>BC033109-1|AAH33109.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 30.3 bits (65), Expect = 9.9
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 527 VKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLE 706
+K E A+E K+EQ RAQ +E +E Q A Y+++L E + + L
Sbjct: 93 LKEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLN 152
Query: 707 KSNVERR 727
+ N+ ++
Sbjct: 153 EENLRKQ 159
>BC014101-1|AAH14101.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 30.3 bits (65), Expect = 9.9
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 527 VKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLE 706
+K E A+E K+EQ RAQ +E +E Q A Y+++L E + + L
Sbjct: 93 LKEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLN 152
Query: 707 KSNVERR 727
+ N+ ++
Sbjct: 153 EENLRKQ 159
>BC011814-1|AAH11814.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 30.3 bits (65), Expect = 9.9
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 527 VKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLE 706
+K E A+E K+EQ RAQ +E +E Q A Y+++L E + + L
Sbjct: 93 LKEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLN 152
Query: 707 KSNVERR 727
+ N+ ++
Sbjct: 153 EENLRKQ 159
>BC007803-1|AAH07803.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 30.3 bits (65), Expect = 9.9
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 527 VKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLE 706
+K E A+E K+EQ RAQ +E +E Q A Y+++L E + + L
Sbjct: 93 LKEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLN 152
Query: 707 KSNVERR 727
+ N+ ++
Sbjct: 153 EENLRKQ 159
>AL645728-10|CAI22955.1| 586|Homo sapiens ATPase family, AAA domain
containing 3A protein.
Length = 586
Score = 30.3 bits (65), Expect = 9.9
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 527 VKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLE 706
+K E A+E K+EQ RAQ +E +E Q A Y+++L E + + L
Sbjct: 93 LKEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLN 152
Query: 707 KSNVERR 727
+ N+ ++
Sbjct: 153 EENLRKQ 159
>AL645728-9|CAI22953.1| 571|Homo sapiens ATPase family, AAA domain
containing 3A protein.
Length = 571
Score = 30.3 bits (65), Expect = 9.9
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 527 VKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLE 706
+K E A+E K+EQ RAQ +E +E Q A Y+++L E + + L
Sbjct: 78 LKEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLN 137
Query: 707 KSNVERR 727
+ N+ ++
Sbjct: 138 EENLRKQ 144
>AL157945-2|CAI22068.1| 648|Homo sapiens ATPase family, AAA domain
containing 3B protein.
Length = 648
Score = 30.3 bits (65), Expect = 9.9
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 527 VKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLE 706
+K E A+E K+EQ RAQ +E +E Q A Y+++L E + + L
Sbjct: 93 LKEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLN 152
Query: 707 KSNVERR 727
+ N+ ++
Sbjct: 153 EENLRKQ 159
>AK001571-1|BAA91764.1| 586|Homo sapiens protein ( Homo sapiens
cDNA FLJ10709 fis, clone NT2RP3000869. ).
Length = 586
Score = 30.3 bits (65), Expect = 9.9
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 527 VKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLE 706
+K E A+E K+EQ RAQ +E +E Q A Y+++L E + + L
Sbjct: 93 LKEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLN 152
Query: 707 KSNVERR 727
+ N+ ++
Sbjct: 153 EENLRKQ 159
>AF343078-1|AAK38647.1| 578|Homo sapiens TOB3 protein.
Length = 578
Score = 30.3 bits (65), Expect = 9.9
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 527 VKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLE 706
+K E A+E K+EQ RAQ +E +E Q A Y+++L E + + L
Sbjct: 92 LKEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLN 151
Query: 707 KSNVERR 727
+ N+ ++
Sbjct: 152 EENLRKQ 158
>AF109907-1|AAC97961.1| 735|Homo sapiens S164 protein.
Length = 735
Score = 30.3 bits (65), Expect = 9.9
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +2
Query: 473 DKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRE 652
++E E E + + E E +K ++ + K E L + EAAY+E
Sbjct: 292 EREREREREREREREREREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQE 351
Query: 653 RLM-YAYTEVKRRLDYQLEKSNVERR 727
RL + E K+ +Y+ E E R
Sbjct: 352 RLKNWEIRERKKTREYEKEAEREEER 377
>AC004858-3|AAF19255.1| 784|Homo sapiens WUGSC:H_DJ0687K01.2
protein.
Length = 784
Score = 30.3 bits (65), Expect = 9.9
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +2
Query: 473 DKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRE 652
++E E E + + E E +K ++ + K E L + EAAY+E
Sbjct: 341 EREREREREREREREREREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQE 400
Query: 653 RLM-YAYTEVKRRLDYQLEKSNVERR 727
RL + E K+ +Y+ E E R
Sbjct: 401 RLKNWEIRERKKTREYEKEAEREEER 426
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,266,852
Number of Sequences: 237096
Number of extensions: 2619199
Number of successful extensions: 10609
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 10051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10606
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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