Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_P14
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53340-6|AAA96210.1| 305|Caenorhabditis elegans Atp synthase b ... 83 2e-16
Z46242-8|CAA86329.1| 301|Caenorhabditis elegans Hypothetical pr... 81 8e-16
AF016423-8|AAB65319.1| 409|Caenorhabditis elegans Hypothetical ... 29 3.4
AC024772-5|AAF60539.1| 407|Caenorhabditis elegans Hypothetical ... 29 3.4
AC024772-4|AAL32240.2| 441|Caenorhabditis elegans Hypothetical ... 29 3.4
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z70286-1|CAA94294.2| 194|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL132904-25|CAB81956.2| 434|Caenorhabditis elegans Hypothetical... 29 5.9
U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein ... 28 7.8
U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein. 28 7.8
U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical pr... 28 7.8
>U53340-6|AAA96210.1| 305|Caenorhabditis elegans Atp synthase b
homolog protein 2 protein.
Length = 305
Score = 83.4 bits (197), Expect = 2e-16
Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 4/179 (2%)
Frame = +2
Query: 251 PGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMVY 430
P K RL +P+ WF F TGV+GPY F GL +L +KE++V E + + + ++
Sbjct: 104 PPKSRLLMMPDSWFTPFQKVTGVSGPYLFFGGLFAFLVNKELWVFEEQGHMTVGWILFYL 163
Query: 431 VAHVKFGPKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQG----QELL 598
+ G K+ L + N + +G Q + L++A+E +KT + + +E
Sbjct: 164 LVTRTAGYKIDQGLYNGYQERVN-FFKGLIQ--EDLKEAVEFKKTSAKQTESLNSIKESY 220
Query: 599 IQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLEKSNVERRLAQKHMVDWIVXNVTK 775
A KE++ LQLEA YR+ + TE+KRR+DY E + R+ ++ ++ I V K
Sbjct: 221 PTALKESMALQLEATYRKNVQSVATELKRRIDYLKETEESKARVEREQLLKLINSEVDK 279
>Z46242-8|CAA86329.1| 301|Caenorhabditis elegans Hypothetical
protein F35G12.10 protein.
Length = 301
Score = 81.4 bits (192), Expect = 8e-16
Identities = 53/182 (29%), Positives = 95/182 (52%), Gaps = 4/182 (2%)
Frame = +2
Query: 251 PGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMVY 430
P K RL +P+ WF F TG +GPY F GL +L +KE++V E + + + ++
Sbjct: 102 PPKTRLLMMPDSWFTAFQKVTGTSGPYLFFGGLFAFLVNKELWVFEEQGHMTVGWILFYL 161
Query: 431 VAHVKFGPKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWR----AQGQELL 598
+ G K+ A L K+ + + +G Q + L++A++ KT + A +E +
Sbjct: 162 LVSRTAGYKIDAGLYKDYQERVG-FFKGLIQ--EDLKEAVDFRKTSAAQTASFAALKEGM 218
Query: 599 IQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLEKSNVERRLAQKHMVDWIVXNVTKA 778
+ K+++ LQLEAAYR+ + E+KRR++Y E + R + ++ I +V K
Sbjct: 219 PTSLKDSMQLQLEAAYRKNVQTISNEIKRRIEYLKETEETKARFERDQLLKLINDSVEKQ 278
Query: 779 IT 784
++
Sbjct: 279 VS 280
>AF016423-8|AAB65319.1| 409|Caenorhabditis elegans Hypothetical
protein F40A3.7 protein.
Length = 409
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 268 WLYS*RMVPILSLENWCDGSLHFWC 342
W Y V ++SL NWC H WC
Sbjct: 95 WFYLHSKVHLISLANWCSSVAH-WC 118
>AC024772-5|AAF60539.1| 407|Caenorhabditis elegans Hypothetical
protein Y40C5A.4a protein.
Length = 407
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 368 CCTGMLPDPHQKCKDPSHQFSSERI 294
CC G+L D HQ+ K +Q SER+
Sbjct: 357 CCPGVLCDTHQRKKLHDNQLESERL 381
>AC024772-4|AAL32240.2| 441|Caenorhabditis elegans Hypothetical
protein Y40C5A.4b protein.
Length = 441
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 368 CCTGMLPDPHQKCKDPSHQFSSERI 294
CC G+L D HQ+ K +Q SER+
Sbjct: 373 CCPGVLCDTHQRKKLHDNQLESERL 397
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/61 (32%), Positives = 25/61 (40%)
Frame = -1
Query: 854 PFTXWPAKPXPRCSGPAPXXPGPEXXXXXXXXXXXXPCASGRDDAPRSTSRAGSPDAASP 675
P T P KP P+ AP PGP+ +G AP S AG+P A P
Sbjct: 144 PITPPPCKPCPQGPAGAPGAPGPQGD-------------AGAPGAPGQGSGAGAPGPAGP 190
Query: 674 Q 672
+
Sbjct: 191 K 191
>Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical
protein K02B12.5 protein.
Length = 1204
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +2
Query: 467 WLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQ----WRAQGQELLIQAKKENVLLQL 634
W DK E +W + +T E I+ E E W+ +++L + K+EN LL+L
Sbjct: 447 WSDKRNEENAIKWKQ---ETDNIPEVVIKNEDDETDVLYWKLSDEDVLERCKEENELLKL 503
Query: 635 EAAYRERL 658
+ +L
Sbjct: 504 DLLTEHQL 511
>Z70286-1|CAA94294.2| 194|Caenorhabditis elegans Hypothetical
protein K08C7.4 protein.
Length = 194
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 520 PNRESTGGRNRGREDG--AVARAGTGAPHPGQEGERAPAARGRLQGEA 657
P R + G R+ +E G +V + A ++ ERAP+ARGR Q A
Sbjct: 87 PRRSTRGKRSYDQETGGRSVRKVVKKAKEVNKKPERAPSARGRGQKPA 134
>AL132904-25|CAB81956.2| 434|Caenorhabditis elegans Hypothetical
protein Y111B2A.5a protein.
Length = 434
Score = 28.7 bits (61), Expect = 5.9
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Frame = +2
Query: 479 EVEATENEWNEGRNQT-VKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE---AAY 646
E + TE+E R++ VK LED I GE+ E+ A+ + N + L+ A
Sbjct: 189 EEKLTESELKTQRSEEKVKNLEDFIVGERMEEAEAEAEAAADGGGARNEVSHLKRYIADL 248
Query: 647 RERLMYAYTEVKRRLDYQLEKSNVERRLAQ 736
+ +L E+K + +L+++N ++ Q
Sbjct: 249 QSKLSTMEEELKVLREQKLDENNEATQVRQ 278
>U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein 502
protein.
Length = 1173
Score = 28.3 bits (60), Expect = 7.8
Identities = 25/90 (27%), Positives = 42/90 (46%)
Frame = +2
Query: 464 AWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAA 643
A + ++ E + NE Q KAL++ E +Q A+ + + K + QLE A
Sbjct: 571 AEIKRDYELLQTRENEKSVQLKKALDERKENGAYQQSVAKATDAEWERKMQFYEKQLEHA 630
Query: 644 YRERLMYAYTEVKRRLDYQLEKSNVERRLA 733
ER E ++R + ++S V R+LA
Sbjct: 631 NDER----KREEQKRTAAEFDQSRVARKLA 656
>U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.
Length = 1173
Score = 28.3 bits (60), Expect = 7.8
Identities = 25/90 (27%), Positives = 42/90 (46%)
Frame = +2
Query: 464 AWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAA 643
A + ++ E + NE Q KAL++ E +Q A+ + + K + QLE A
Sbjct: 571 AEIKRDYELLQTRENEKSVQLKKALDERKENGAYQQSVAKATDAEWERKMQFYEKQLEHA 630
Query: 644 YRERLMYAYTEVKRRLDYQLEKSNVERRLA 733
ER E ++R + ++S V R+LA
Sbjct: 631 NDER----KREEQKRTAAEFDQSRVARKLA 656
>U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical
protein C27D6.1 protein.
Length = 782
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +2
Query: 476 KEVEATENEWNEGRNQTVKALEDA-IEGEKT----EQWRAQGQELLIQAKK 613
KE+EA +W + + K L + +E +T E+W+ + QE+ IQ K+
Sbjct: 250 KEIEAEAEKWKDRATRNSKRLPELELELAETVQAKEEWQVKSQEMEIQNKQ 300
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,285,997
Number of Sequences: 27780
Number of extensions: 378712
Number of successful extensions: 1293
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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