Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_P13
(963 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 36 0.033
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 34 0.17
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 34 0.17
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.40
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.40
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 32 0.53
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.70
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 32 0.70
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.70
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.70
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.70
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.70
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 1.2
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 30 2.8
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 3.7
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 28 8.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 8.6
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 8.6
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 36.3 bits (80), Expect = 0.033
Identities = 28/106 (26%), Positives = 29/106 (27%), Gaps = 1/106 (0%)
Frame = +2
Query: 638 PPDEXXKXRXPPSRGGXXPTGXSRXPXVXPXXPPLXPPXLXPXPXXFXXXXXXXXXXXXX 817
PP PPS G P S P P P P
Sbjct: 181 PPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGG 240
Query: 818 RXGPFXXXX-PPGGFXPXPGXXSFLPPTXXLXXPXPPRXXPXPGXP 952
GPF PP G P P S PP+ P P P G P
Sbjct: 241 PPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGP 286
Score = 35.9 bits (79), Expect = 0.043
Identities = 28/106 (26%), Positives = 29/106 (27%), Gaps = 1/106 (0%)
Frame = +2
Query: 638 PPDEXXKXRXPPSRGGXXPTGXSRXPXVXPXXPPLXPPXLXPXPXXFXXXXXXXXXXXXX 817
PP PPS G P S P P P P
Sbjct: 196 PPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG 255
Query: 818 RXGPFXXXX-PPGGFXPXPGXXSFLPPTXXLXXPXPPRXXPXPGXP 952
GPF PP G P P S PP+ P P P G P
Sbjct: 256 PPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGP 301
Score = 35.5 bits (78), Expect = 0.057
Identities = 28/106 (26%), Positives = 29/106 (27%), Gaps = 1/106 (0%)
Frame = +2
Query: 638 PPDEXXKXRXPPSRGGXXPTGXSRXPXVXPXXPPLXPPXLXPXPXXFXXXXXXXXXXXXX 817
PP PPS G P S P P P P
Sbjct: 391 PPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGG 450
Query: 818 RXGPFXXXX-PPGGFXPXPGXXSFLPPTXXLXXPXPPRXXPXPGXP 952
GPF PP G P P S PP+ P P P G P
Sbjct: 451 PPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGP 496
Score = 35.5 bits (78), Expect = 0.057
Identities = 28/106 (26%), Positives = 29/106 (27%), Gaps = 1/106 (0%)
Frame = +2
Query: 638 PPDEXXKXRXPPSRGGXXPTGXSRXPXVXPXXPPLXPPXLXPXPXXFXXXXXXXXXXXXX 817
PP PPS G P S P P P P
Sbjct: 421 PPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGG 480
Query: 818 RXGPFXXXX-PPGGFXPXPGXXSFLPPTXXLXXPXPPRXXPXPGXP 952
GPF PP G P P S PP+ P P P G P
Sbjct: 481 PPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGMP 526
Score = 35.1 bits (77), Expect = 0.075
Identities = 28/106 (26%), Positives = 29/106 (27%), Gaps = 1/106 (0%)
Frame = +2
Query: 638 PPDEXXKXRXPPSRGGXXPTGXSRXPXVXPXXPPLXPPXLXPXPXXFXXXXXXXXXXXXX 817
PP PPS G P S P P P P
Sbjct: 271 PPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGG 330
Query: 818 RXGPFXXXX-PPGGFXPXPGXXSFLPPTXXLXXPXPPRXXPXPGXP 952
GPF PP G P P S PP+ P P P G P
Sbjct: 331 PPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGP 376
Score = 35.1 bits (77), Expect = 0.075
Identities = 39/148 (26%), Positives = 44/148 (29%), Gaps = 4/148 (2%)
Frame = +1
Query: 529 SPESGGXPRXQXVXKRPXXGPXP*KGRXXGXXP*APPP*RASXXSXPPXQGWXXP--DXX 702
+P SGG P P G P G P PP + PP G P
Sbjct: 385 APPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSG 444
Query: 703 FPXTXRXP-XXTPPXXPPLXXXPXXLSRXPRXAXXPXXGTXGPLXP-XXPPWXVSPXXRX 876
P + P P PP P + P A P G GP P PP P
Sbjct: 445 APPSGGPPGPFNPSGAPPSGGPPGPFN--PSGA-PPSGGPPGPFDPSGAPPSGGPPGPFN 501
Query: 877 XXXPPPXXGLVXPXTPPXXXXARXPXXP 960
PP G P P + P P
Sbjct: 502 PSGAPPSGGPPGPFDPSGAPPSGMPPVP 529
Score = 34.7 bits (76), Expect = 0.099
Identities = 28/106 (26%), Positives = 29/106 (27%), Gaps = 1/106 (0%)
Frame = +2
Query: 638 PPDEXXKXRXPPSRGGXXPTGXSRXPXVXPXXPPLXPPXLXPXPXXFXXXXXXXXXXXXX 817
PP PPS G P S P P P P
Sbjct: 316 PPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG 375
Query: 818 RXGPFXXXX-PPGGFXPXPGXXSFLPPTXXLXXPXPPRXXPXPGXP 952
GPF PP G P P S PP+ P P P G P
Sbjct: 376 PPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGP 421
Score = 34.7 bits (76), Expect = 0.099
Identities = 40/151 (26%), Positives = 44/151 (29%), Gaps = 7/151 (4%)
Frame = +1
Query: 529 SPESGGXPRXQXVXKRPXXGPXP*KGRXXGXXP*APPP*RASXXSXPPXQGWXXPDXXFP 708
+P SGG P P G P G P PP PP G P F
Sbjct: 340 APPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGG---PPGPFD 396
Query: 709 XTXRXPXXTPP------XXPPLXXXPXXLSRXPRXAXXPXXGTXGPLXP-XXPPWXVSPX 867
+ P PP PP P + P A P G GP P PP P
Sbjct: 397 PSGAPPSGGPPGPFNPSGAPPSGGPPGPFN--PSGA-PPSGGPPGPFNPSGAPPSGGPPG 453
Query: 868 XRXXXXPPPXXGLVXPXTPPXXXXARXPXXP 960
PP G P P + P P
Sbjct: 454 PFNPSGAPPSGGPPGPFNPSGAPPSGGPPGP 484
Score = 34.7 bits (76), Expect = 0.099
Identities = 39/148 (26%), Positives = 44/148 (29%), Gaps = 4/148 (2%)
Frame = +1
Query: 529 SPESGGXPRXQXVXKRPXXGPXP*KGRXXGXXP*APPP*RASXXSXPPXQGWXXP--DXX 702
+P SGG P P G P G P PP + PP G P
Sbjct: 370 APPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSG 429
Query: 703 FPXTXRXP-XXTPPXXPPLXXXPXXLSRXPRXAXXPXXGTXGPLXP-XXPPWXVSPXXRX 876
P + P P PP P + P A P G GP P PP P
Sbjct: 430 APPSGGPPGPFNPSGAPPSGGPPGPFN--PSGA-PPSGGPPGPFNPSGAPPSGGPPGPFD 486
Query: 877 XXXPPPXXGLVXPXTPPXXXXARXPXXP 960
PP G P P + P P
Sbjct: 487 PSGAPPSGGPPGPFNPSGAPPSGGPPGP 514
Score = 34.3 bits (75), Expect = 0.13
Identities = 40/151 (26%), Positives = 44/151 (29%), Gaps = 7/151 (4%)
Frame = +1
Query: 529 SPESGGXPRXQXVXKRPXXGPXP*KGRXXGXXP*APPP*RASXXSXPPXQGWXXPDXXFP 708
+P SGG P P G P G P PP + PP G P F
Sbjct: 160 APPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGG---PTGPFD 216
Query: 709 XTXRXPXXTPP------XXPPLXXXPXXLSRXPRXAXXPXXGTXGPLXP-XXPPWXVSPX 867
+ P PP PP P P A P G GP P PP P
Sbjct: 217 PSGAPPSGGPPGPFNPSGAPPSGGPPGPFD--PSGA-PPSGGPPGPFNPSGAPPSGGPPG 273
Query: 868 XRXXXXPPPXXGLVXPXTPPXXXXARXPXXP 960
PP G P P + P P
Sbjct: 274 PFDPSGAPPSGGPPGPFDPSGAPPSGGPPGP 304
Score = 34.3 bits (75), Expect = 0.13
Identities = 38/148 (25%), Positives = 41/148 (27%), Gaps = 4/148 (2%)
Frame = +1
Query: 529 SPESGGXPRXQXVXKRPXXGPXP*KGRXXGXXP*APPP*RASXXSXPPXQGWXXPDXXFP 708
+P SGG P P G P G P PP PP G P F
Sbjct: 235 APPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG---PPGPFD 291
Query: 709 XTXRXPXXTPP-XXPPLXXXPXXLSRXP--RXAXXPXXGTXGPLXP-XXPPWXVSPXXRX 876
+ P PP P P P P G GP P PP P
Sbjct: 292 PSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFN 351
Query: 877 XXXPPPXXGLVXPXTPPXXXXARXPXXP 960
PP G P P + P P
Sbjct: 352 PSGAPPSGGPPGPFDPSGAPPSGGPPGP 379
Score = 32.3 bits (70), Expect = 0.53
Identities = 27/106 (25%), Positives = 28/106 (26%), Gaps = 1/106 (0%)
Frame = +2
Query: 638 PPDEXXKXRXPPSRGGXXPTGXSRXPXVXPXXPPLXPPXLXPXPXXFXXXXXXXXXXXXX 817
PP PS G P S P P P P
Sbjct: 301 PPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGG 360
Query: 818 RXGPFXXXX-PPGGFXPXPGXXSFLPPTXXLXXPXPPRXXPXPGXP 952
GPF PP G P P S PP+ P P P G P
Sbjct: 361 PPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGP 406
Score = 31.9 bits (69), Expect = 0.70
Identities = 38/148 (25%), Positives = 41/148 (27%), Gaps = 4/148 (2%)
Frame = +1
Query: 529 SPESGGXPRXQXVXKRPXXGPXP*KGRXXGXXP*APPP*RASXXSXPP---XQGWXXPDX 699
+P SGG P P G P G P PP PP G P
Sbjct: 145 APPSGGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSE 204
Query: 700 XFPXTXRXPXXTPPXXPPLXXXPXXLSRXPRXAXXPXXGTXGPLXP-XXPPWXVSPXXRX 876
P P PP P + P A P G GP P PP P
Sbjct: 205 APPSGGPTGPFDPSGAPPSGGPPGPFN--PSGA-PPSGGPPGPFDPSGAPPSGGPPGPFN 261
Query: 877 XXXPPPXXGLVXPXTPPXXXXARXPXXP 960
PP G P P + P P
Sbjct: 262 PSGAPPSGGPPGPFDPSGAPPSGGPPGP 289
Score = 31.9 bits (69), Expect = 0.70
Identities = 27/106 (25%), Positives = 28/106 (26%), Gaps = 1/106 (0%)
Frame = +2
Query: 638 PPDEXXKXRXPPSRGGXXPTGXSRXPXVXPXXPPLXPPXLXPXPXXFXXXXXXXXXXXXX 817
PP PPS G P S P P P
Sbjct: 286 PPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG 345
Query: 818 RXGPFXXXX-PPGGFXPXPGXXSFLPPTXXLXXPXPPRXXPXPGXP 952
GPF PP G P P S PP+ P P P G P
Sbjct: 346 PPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGP 391
Score = 31.1 bits (67), Expect = 1.2
Identities = 27/106 (25%), Positives = 28/106 (26%), Gaps = 1/106 (0%)
Frame = +2
Query: 638 PPDEXXKXRXPPSRGGXXPTGXSRXPXVXPXXPPLXPPXLXPXPXXFXXXXXXXXXXXXX 817
PP PPS G S P P P P
Sbjct: 151 PPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGG 210
Query: 818 RXGPFXXXX-PPGGFXPXPGXXSFLPPTXXLXXPXPPRXXPXPGXP 952
GPF PP G P P S PP+ P P P G P
Sbjct: 211 PTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGP 256
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/96 (26%), Positives = 26/96 (27%), Gaps = 1/96 (1%)
Frame = +2
Query: 638 PPDEXXKXRXPPSRGGXXPTGXSRXPXVXPXXPPLXPPXLXPXPXXFXXXXXXXXXXXXX 817
PP PPS G P S P P P P
Sbjct: 436 PPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG 495
Query: 818 RXGPFXXXX-PPGGFXPXPGXXSFLPPTXXLXXPXP 922
GPF PP G P P S PP+ P P
Sbjct: 496 PPGPFNPSGAPPSGGPPGPFDPSGAPPSGMPPVPLP 531
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 33.9 bits (74), Expect = 0.17
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = +1
Query: 577 PXXGPXP*KGRXXGXXP*APPP*RASXXSXPPXQGWXXPDXXFPXTXRXPXXTPPXXPP 753
P P P K R G P PPP R P P P R P TPP P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEP 180
Score = 29.1 bits (62), Expect = 4.9
Identities = 23/93 (24%), Positives = 28/93 (30%), Gaps = 1/93 (1%)
Frame = +3
Query: 669 PXPGVAXPRXXFPGXXXXPPXNPPXXPPXXXXXLXAFPXPPXRXX-PXXGXAXAPXPXXP 845
P PG + P PP PP + P PP P +P P P
Sbjct: 101 PVPGQEGHQVPAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRP 160
Query: 846 PLXGFXXXPXXXXSSPXPGXCXXXNPPXXXPRP 944
P+ + P P NPP P P
Sbjct: 161 PMTPPSPQRRPPRTPPSP---EPRNPPRTPPSP 190
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 33.9 bits (74), Expect = 0.17
Identities = 26/88 (29%), Positives = 29/88 (32%)
Frame = -2
Query: 836 GXRGPXVPXXGXXAXRGXRESXQGXXXXGGXXGGVXXGXRXVSGKXXSGXXHPWXGGXXF 657
G RGP G G S G GG GG G G G GG +
Sbjct: 62 GQRGPFAAMTGSYGRGGYGGS--GGGAFGGFNGGYGQGGYGGGGDFGGGMGGGGYGGGGY 119
Query: 656 XXARQGGGAYGXXPXXRPFYGXGPFXGL 573
GGG YG YG G + G+
Sbjct: 120 GGGGDGGGGYGG-------YGGGGYGGM 140
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.7 bits (71), Expect = 0.40
Identities = 33/131 (25%), Positives = 35/131 (26%), Gaps = 3/131 (2%)
Frame = -2
Query: 959 GXXGXRAXXXXGGVXGXTXPXXGGGXXXXRXXGETXQGGXXGXRGPXVPXXGXXAXRGXR 780
G G GG G GGG G GG G G G + G
Sbjct: 89 GCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCG 148
Query: 779 ESXQGXXXXGGXXGGVXXGXRXVSGKXXSGXXH---PWXGGXXFXXARQGGGAYGXXPXX 609
G GG G G G G + P GG GGG Y P
Sbjct: 149 GGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSG 208
Query: 608 RPFYGXGPFXG 576
G G G
Sbjct: 209 GGGCGGGGSSG 219
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.7 bits (71), Expect = 0.40
Identities = 33/131 (25%), Positives = 35/131 (26%), Gaps = 3/131 (2%)
Frame = -2
Query: 959 GXXGXRAXXXXGGVXGXTXPXXGGGXXXXRXXGETXQGGXXGXRGPXVPXXGXXAXRGXR 780
G G GG G GGG G GG G G G + G
Sbjct: 89 GCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCG 148
Query: 779 ESXQGXXXXGGXXGGVXXGXRXVSGKXXSGXXH---PWXGGXXFXXARQGGGAYGXXPXX 609
G GG G G G G + P GG GGG Y P
Sbjct: 149 GGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSG 208
Query: 608 RPFYGXGPFXG 576
G G G
Sbjct: 209 GGGCGGGGSSG 219
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical protein
R08B4.1b protein.
Length = 1160
Score = 32.3 bits (70), Expect = 0.53
Identities = 23/92 (25%), Positives = 23/92 (25%)
Frame = -3
Query: 943 GRGXXXGGXXXXQXPGXGEEXXXXGXXXKPXRGGXXGKGAXAXPXXGXXRXGGXGKAXRX 764
G G GG G G G GG G G G GG G
Sbjct: 789 GGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGG 848
Query: 763 XXQXGGXXGGXXGGNXXXPGXSXRGXATPGXG 668
G G GN G A G G
Sbjct: 849 AGAGNGNGAGAGNGNGAGAGNGNGAGAGNGNG 880
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.70
Identities = 29/112 (25%), Positives = 31/112 (27%), Gaps = 6/112 (5%)
Frame = +1
Query: 634 PPP*RASXXSXPPXQGWXXPDXXFPXTXRXPXXTP-PXXPPLXXXPXXLSRXPRXAXXPX 810
PPP S Q P T P P P P P P P
Sbjct: 245 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 304
Query: 811 XGTXGP-----LXPXXPPWXVSPXXRXXXXPPPXXGLVXPXTPPXXXXARXP 951
T GP + P PP P PPP G+ P P R P
Sbjct: 305 GRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 356
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +1
Query: 835 PXXPPWXVSPXXRXXXXPPPXXGLVXPXTPPXXXXARXPXXPG 963
P PP +P PPP G+ P PP R P PG
Sbjct: 272 PMPPPMPPTPGMTPRPPPPPSSGMWPP--PPPPPPGRTPGPPG 312
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 31.9 bits (69), Expect = 0.70
Identities = 27/96 (28%), Positives = 29/96 (30%), Gaps = 4/96 (4%)
Frame = -2
Query: 902 PXXGGGXXXXRXXGETXQGGXXGXRGPXVPXXGXXAXRGXRESXQGXXXX----GGXXGG 735
P GGG GG G P P G A G GG GG
Sbjct: 58 PSLGGGGGCCPPPAPACGGGCGGGVAP-APIGGGYAQAPQAPIGGGYAAPQAPIGGGYGG 116
Query: 734 VXXGXRXVSGKXXSGXXHPWXGGXXFXXARQGGGAY 627
G +G G P GG + A GGAY
Sbjct: 117 APIGGGSYAGAGPIGGGAPIGGGAGYAGAAPAGGAY 152
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.70
Identities = 21/78 (26%), Positives = 23/78 (29%)
Frame = +3
Query: 705 PGXXXXPPXNPPXXPPXXXXXLXAFPXPPXRXXPXXGXAXAPXPXXPPLXGFXXXPXXXX 884
PG PP PP + P PP + P P PP G P
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP---- 772
Query: 885 SSPXPGXCXXXNPPXXXP 938
P PG PP P
Sbjct: 773 PPPPPGGFKGGPPPPPPP 790
Score = 31.5 bits (68), Expect = 0.92
Identities = 23/94 (24%), Positives = 26/94 (27%)
Frame = +3
Query: 681 VAXPRXXFPGXXXXPPXNPPXXPPXXXXXLXAFPXPPXRXXPXXGXAXAPXPXXPPLXGF 860
++ P G PP PP + P PP P P PP
Sbjct: 693 LSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP 752
Query: 861 XXXPXXXXSSPXPGXCXXXNPPXXXPRPGAXXXG 962
P PG C PP P PG G
Sbjct: 753 PISGGPPPPPPPPGGCP---PPPPPPPPGGFKGG 783
Score = 30.3 bits (65), Expect = 2.1
Identities = 28/108 (25%), Positives = 32/108 (29%), Gaps = 10/108 (9%)
Frame = +1
Query: 631 APPP*RASXXSXPPXQGWXXPDXXFPXTXRXPXXTPPXX--PPLXXXPXXLSRXPRXAXX 804
AP + PP G P P P PP PP+ P P
Sbjct: 695 APSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP--PPPPGGLP 752
Query: 805 PXXGTXGPLXPXXPPWXVSPXX--------RXXXXPPPXXGLVXPXTP 924
P G GP P PP P + PPP G+ P P
Sbjct: 753 PISG--GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 29.1 bits (62), Expect = 4.9
Identities = 25/91 (27%), Positives = 28/91 (30%), Gaps = 3/91 (3%)
Frame = +3
Query: 639 PLTSXXKXXXPXPGVAXPRXXFPGXXXXPPXN---PPXXPPXXXXXLXAFPXPPXRXXPX 809
P+T P + P PP PP PP + P PP P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP---PP 764
Query: 810 XGXAXAPXPXXPPLXGFXXXPXXXXSSPXPG 902
G P P PP GF P P PG
Sbjct: 765 PGGCPPPPPPPPP-GGFKGGP---PPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.70
Identities = 21/78 (26%), Positives = 23/78 (29%)
Frame = +3
Query: 705 PGXXXXPPXNPPXXPPXXXXXLXAFPXPPXRXXPXXGXAXAPXPXXPPLXGFXXXPXXXX 884
PG PP PP + P PP + P P PP G P
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP---- 772
Query: 885 SSPXPGXCXXXNPPXXXP 938
P PG PP P
Sbjct: 773 PPPPPGGFKGGPPPPPPP 790
Score = 31.5 bits (68), Expect = 0.92
Identities = 23/94 (24%), Positives = 26/94 (27%)
Frame = +3
Query: 681 VAXPRXXFPGXXXXPPXNPPXXPPXXXXXLXAFPXPPXRXXPXXGXAXAPXPXXPPLXGF 860
++ P G PP PP + P PP P P PP
Sbjct: 693 LSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP 752
Query: 861 XXXPXXXXSSPXPGXCXXXNPPXXXPRPGAXXXG 962
P PG C PP P PG G
Sbjct: 753 PISGGPPPPPPPPGGCP---PPPPPPPPGGFKGG 783
Score = 30.3 bits (65), Expect = 2.1
Identities = 28/108 (25%), Positives = 32/108 (29%), Gaps = 10/108 (9%)
Frame = +1
Query: 631 APPP*RASXXSXPPXQGWXXPDXXFPXTXRXPXXTPPXX--PPLXXXPXXLSRXPRXAXX 804
AP + PP G P P P PP PP+ P P
Sbjct: 695 APSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP--PPPPGGLP 752
Query: 805 PXXGTXGPLXPXXPPWXVSPXX--------RXXXXPPPXXGLVXPXTP 924
P G GP P PP P + PPP G+ P P
Sbjct: 753 PISG--GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 29.1 bits (62), Expect = 4.9
Identities = 25/91 (27%), Positives = 28/91 (30%), Gaps = 3/91 (3%)
Frame = +3
Query: 639 PLTSXXKXXXPXPGVAXPRXXFPGXXXXPPXN---PPXXPPXXXXXLXAFPXPPXRXXPX 809
P+T P + P PP PP PP + P PP P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP---PP 764
Query: 810 XGXAXAPXPXXPPLXGFXXXPXXXXSSPXPG 902
G P P PP GF P P PG
Sbjct: 765 PGGCPPPPPPPPP-GGFKGGP---PPPPPPG 791
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.70
Identities = 29/112 (25%), Positives = 31/112 (27%), Gaps = 6/112 (5%)
Frame = +1
Query: 634 PPP*RASXXSXPPXQGWXXPDXXFPXTXRXPXXTP-PXXPPLXXXPXXLSRXPRXAXXPX 810
PPP S Q P T P P P P P P P
Sbjct: 255 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 314
Query: 811 XGTXGP-----LXPXXPPWXVSPXXRXXXXPPPXXGLVXPXTPPXXXXARXP 951
T GP + P PP P PPP G+ P P R P
Sbjct: 315 GRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 366
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +1
Query: 835 PXXPPWXVSPXXRXXXXPPPXXGLVXPXTPPXXXXARXPXXPG 963
P PP +P PPP G+ P PP R P PG
Sbjct: 282 PMPPPMPPTPGMTPRPPPPPSSGMWPP--PPPPPPGRTPGPPG 322
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.70
Identities = 21/78 (26%), Positives = 23/78 (29%)
Frame = +3
Query: 705 PGXXXXPPXNPPXXPPXXXXXLXAFPXPPXRXXPXXGXAXAPXPXXPPLXGFXXXPXXXX 884
PG PP PP + P PP + P P PP G P
Sbjct: 300 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP---- 355
Query: 885 SSPXPGXCXXXNPPXXXP 938
P PG PP P
Sbjct: 356 PPPPPGGFKGGPPPPPPP 373
Score = 31.5 bits (68), Expect = 0.92
Identities = 23/94 (24%), Positives = 26/94 (27%)
Frame = +3
Query: 681 VAXPRXXFPGXXXXPPXNPPXXPPXXXXXLXAFPXPPXRXXPXXGXAXAPXPXXPPLXGF 860
++ P G PP PP + P PP P P PP
Sbjct: 276 LSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP 335
Query: 861 XXXPXXXXSSPXPGXCXXXNPPXXXPRPGAXXXG 962
P PG C PP P PG G
Sbjct: 336 PISGGPPPPPPPPGGCP---PPPPPPPPGGFKGG 366
Score = 30.3 bits (65), Expect = 2.1
Identities = 28/108 (25%), Positives = 32/108 (29%), Gaps = 10/108 (9%)
Frame = +1
Query: 631 APPP*RASXXSXPPXQGWXXPDXXFPXTXRXPXXTPPXX--PPLXXXPXXLSRXPRXAXX 804
AP + PP G P P P PP PP+ P P
Sbjct: 278 APSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP--PPPPGGLP 335
Query: 805 PXXGTXGPLXPXXPPWXVSPXX--------RXXXXPPPXXGLVXPXTP 924
P G GP P PP P + PPP G+ P P
Sbjct: 336 PISG--GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 29.1 bits (62), Expect = 4.9
Identities = 25/91 (27%), Positives = 28/91 (30%), Gaps = 3/91 (3%)
Frame = +3
Query: 639 PLTSXXKXXXPXPGVAXPRXXFPGXXXXPPXN---PPXXPPXXXXXLXAFPXPPXRXXPX 809
P+T P + P PP PP PP + P PP P
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP---PP 347
Query: 810 XGXAXAPXPXXPPLXGFXXXPXXXXSSPXPG 902
G P P PP GF P P PG
Sbjct: 348 PGGCPPPPPPPPP-GGFKGGP---PPPPPPG 374
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/92 (27%), Positives = 25/92 (27%)
Frame = -3
Query: 943 GRGXXXGGXXXXQXPGXGEEXXXXGXXXKPXRGGXXGKGAXAXPXXGXXRXGGXGKAXRX 764
GRG GG G G G RG G G G GG
Sbjct: 58 GRGGGRGGGDWGGNNGGGGNWGGNGGG----RGDWGGNGGGGRGGGGRGDWGGNNNGGGG 113
Query: 763 XXQXGGXXGGXXGGNXXXPGXSXRGXATPGXG 668
GG G GGN G G G G
Sbjct: 114 NWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDG 145
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +2
Query: 848 PGGFXPXPGXXSFLPPTXXLXXPXPPRXXPXPGXP 952
PG + P PG PP PP P PG P
Sbjct: 171 PGVYMPPPGMPGAYPPPRMPIGHGPPGGPPMPGPP 205
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/93 (23%), Positives = 26/93 (27%)
Frame = +3
Query: 669 PXPGVAXPRXXFPGXXXXPPXNPPXXPPXXXXXLXAFPXPPXRXXPXXGXAXAPXPXXPP 848
P P FPG P PP + + PP R P P P
Sbjct: 112 PTPMPFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPP-RGMPGAYPPPRGYPPAPA 170
Query: 849 LXGFXXXPXXXXSSPXPGXCXXXNPPXXXPRPG 947
+ P + P P PP P PG
Sbjct: 171 PGVYMPPPGMPGAYPPPRMPIGHGPPGGPPMPG 203
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +2
Query: 848 PGGFXPXPGXXSFLPPTXXLXXPXPPRXXPXPGXP 952
PG + P PG PP PP P PG P
Sbjct: 171 PGVYMPPPGMPGAYPPPRMPIGHGPPGGPPMPGPP 205
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/93 (23%), Positives = 26/93 (27%)
Frame = +3
Query: 669 PXPGVAXPRXXFPGXXXXPPXNPPXXPPXXXXXLXAFPXPPXRXXPXXGXAXAPXPXXPP 848
P P FPG P PP + + PP R P P P
Sbjct: 112 PTPMPFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPP-RGMPGAYPPPRGYPPAPA 170
Query: 849 LXGFXXXPXXXXSSPXPGXCXXXNPPXXXPRPG 947
+ P + P P PP P PG
Sbjct: 171 PGVYMPPPGMPGAYPPPRMPIGHGPPGGPPMPG 203
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/85 (25%), Positives = 24/85 (28%), Gaps = 1/85 (1%)
Frame = -2
Query: 959 GXXGXRAXXXXGGVXGXTXPXXGG-GXXXXRXXGETXQGGXXGXRGPXVPXXGXXAXRGX 783
G G GG+ G GG G G GG G G G G
Sbjct: 81 GRGGNGGFGDNGGLRGGNGGGRGGNGGFDDNGGGRGGNGGGRGGTGGFGDNGGGRGGNGG 140
Query: 782 RESXQGXXXXGGXXGGVXXGXRXVS 708
G GG GG G +S
Sbjct: 141 GRGGNGGGNNGGGRGGNGGGRPQIS 165
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.5 bits (63), Expect = 3.7
Identities = 28/93 (30%), Positives = 30/93 (32%), Gaps = 2/93 (2%)
Frame = -3
Query: 946 PGRGXXXGGXXXXQXPGXGEEXXXXGXXXKPXRGGXXGKGAXAXPXXGXXRXGGXGKA-- 773
PG GG PG + G P + G GK A G R G G A
Sbjct: 208 PGAPSFGGGVGAPGAPGPAGDAGSPGQPGAPGQPGRPGKNAQG----GSSRPGPPGPAGP 263
Query: 772 XRXXXQXGGXXGGXXGGNXXXPGXSXRGXATPG 674
G GG G PG S R A PG
Sbjct: 264 PGPPGNNGAPGGGYGVGPPGPPGPSGRPGA-PG 295
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 28.3 bits (60), Expect = 8.6
Identities = 33/117 (28%), Positives = 34/117 (29%), Gaps = 7/117 (5%)
Frame = +1
Query: 634 PP--P*RASXXSXPPXQGWXXPDXXFPXTXRXPXXTPPXXPPLXXXPXXLSRXPRXAXXP 807
PP P RA P G P P TPP P P P A P
Sbjct: 97 PPGTPGRAGRPGKPGAPGLNGNPGRPPKEPCEPI-TPPPCKPCPEGP------PGPAGPP 149
Query: 808 XX-GTXGPLXPXXPPWXVSP----XXRXXXXPPPXXGLVXPXTPPXXXXARXPXXPG 963
G GPL P PP P + PP G P PP PG
Sbjct: 150 GPQGNKGPLGPPGPPGPEGPNGTAGNKGPAGPPGPGGKPGPAGPPGENGRNGEPQPG 206
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 28.3 bits (60), Expect = 8.6
Identities = 24/100 (24%), Positives = 29/100 (29%)
Frame = -1
Query: 936 GXXRGGXGXXKXXVGGRXXXXPGXGXNPPGGXXXXKGPXRXXXXXXXXXXXXGKXXGXGX 757
G GG G + GG G G GG G G G
Sbjct: 50 GGTGGGRGGGRGGSGGGRGGGSGGGRGGSGGAGA--GGSGSGSGGWGGQDGGSSAGGWGG 107
Query: 756 KXGGXRGGXXGXTXGXREXPVGXXPPLXGGXRXXXXSSGG 637
GG +GG G G G GG + ++GG
Sbjct: 108 SQGGSQGGSSGGWGGSSRSDSGSGQGGWGGQQGGNSNAGG 147
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +3
Query: 723 PPXNPPXXPPXXXXXLXAFPXPPXRXXPXXGXAXAPXPXXPP 848
PP PP PP P PP P P PP
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPP 1379
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +3
Query: 735 PPXXPPXXXXXLXAFPXPPXRXXPXXGXAXAPXPXXPPLXG 857
PP PP L P PP P G P P PP G
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLG---GPPPPPPPPGG 598
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,632,213
Number of Sequences: 27780
Number of extensions: 207014
Number of successful extensions: 824
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2490012644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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