Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_P11
(888 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT004883-1|AAO45239.1| 407|Drosophila melanogaster GH09439p pro... 265 6e-71
AE013599-559|AAF59157.1| 407|Drosophila melanogaster CG8725-PA ... 265 6e-71
AF129082-1|AAD28607.1| 407|Drosophila melanogaster COP9 signalo... 262 3e-70
BT022088-1|AAY33504.1| 787|Drosophila melanogaster RE03647p pro... 31 2.8
BT010028-1|AAQ22497.1| 787|Drosophila melanogaster RE03551p pro... 31 2.8
AF279586-1|AAF82381.1| 1384|Drosophila melanogaster TIM2 protein... 31 2.8
AF268472-1|AAF73481.1| 1384|Drosophila melanogaster TIMEOUT prot... 31 2.8
AE014297-1632|AAF54908.3| 1384|Drosophila melanogaster CG7855-PA... 31 2.8
AY069196-1|AAL39341.1| 397|Drosophila melanogaster GH25458p pro... 30 4.9
AE014296-875|AAF47921.3| 397|Drosophila melanogaster CG32245-PA... 30 4.9
AY071292-1|AAL48914.1| 513|Drosophila melanogaster RE32485p pro... 29 6.5
AE014296-3379|AAN12133.1| 513|Drosophila melanogaster CG5130-PB... 29 6.5
AE014296-3378|AAF51612.1| 513|Drosophila melanogaster CG5130-PA... 29 6.5
AY118742-1|AAM50602.1| 448|Drosophila melanogaster GH05665p pro... 29 8.6
AY118636-1|AAM50005.1| 1238|Drosophila melanogaster SD02122p pro... 29 8.6
AJ271845-1|CAB76376.1| 1238|Drosophila melanogaster SMC1 protein... 29 8.6
AF225909-1|AAF43149.1| 1238|Drosophila melanogaster cohesin subu... 29 8.6
AE014297-3454|AAF56231.1| 1238|Drosophila melanogaster CG6057-PA... 29 8.6
AE014297-928|AAN13423.1| 448|Drosophila melanogaster CG9356-PB,... 29 8.6
AE014297-927|AAF54371.1| 448|Drosophila melanogaster CG9356-PA,... 29 8.6
>BT004883-1|AAO45239.1| 407|Drosophila melanogaster GH09439p
protein.
Length = 407
Score = 265 bits (649), Expect = 6e-71
Identities = 135/234 (57%), Positives = 170/234 (72%)
Frame = +1
Query: 160 VNLQSVRQYLSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSL 339
++ ++R L L N G HKDQA+KYR +L +L +T QEL + L+ F+EAIVNE+VSL
Sbjct: 7 ISTAALRSQLMGLINFTGTHKDQADKYRQLLKTVLTNTGQELIDGLRLFVEAIVNEHVSL 66
Query: 340 VISRQLLTDVSTHLALLADNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYERNQN 519
VISRQ+L DV + L+ L D++S+ +SHF L+ + PRVISFEEQVA IR HLA+IYERNQ
Sbjct: 67 VISRQILNDVGSELSKLPDDLSKMLSHFTLEKVNPRVISFEEQVAGIRFHLANIYERNQQ 126
Query: 520 WKEAANVLVGIPLETGQKQYSVDYKLETYLKIARLYLEVDDPVQAEAFVNRASLLQAETT 699
W++AA VLVGIPLETGQKQYSV+ KL TYLKIARLYLE +D VQAE F+NRASLLQAET
Sbjct: 127 WRDAATVLVGIPLETGQKQYSVECKLGTYLKIARLYLEDNDSVQAELFINRASLLQAETN 186
Query: 700 NEQLQIYYKVCYARV*IIEGNSSKRLKGTMNCHIVTLSTKTSGMTCLRNALICT 861
+E+LQ+ YKVCYARV + + + + MT L+ ALICT
Sbjct: 187 SEELQVLYKVCYARVLDYRRKFIEAAQRYNELSYRKIVDQGERMTALKKALICT 240
>AE013599-559|AAF59157.1| 407|Drosophila melanogaster CG8725-PA
protein.
Length = 407
Score = 265 bits (649), Expect = 6e-71
Identities = 135/234 (57%), Positives = 170/234 (72%)
Frame = +1
Query: 160 VNLQSVRQYLSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSL 339
++ ++R L L N G HKDQA+KYR +L +L +T QEL + L+ F+EAIVNE+VSL
Sbjct: 7 ISTAALRSQLMGLINFTGTHKDQADKYRQLLKTVLTNTGQELIDGLRLFVEAIVNEHVSL 66
Query: 340 VISRQLLTDVSTHLALLADNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYERNQN 519
VISRQ+L DV + L+ L D++S+ +SHF L+ + PRVISFEEQVA IR HLA+IYERNQ
Sbjct: 67 VISRQILNDVGSELSKLPDDLSKMLSHFTLEKVNPRVISFEEQVAGIRFHLANIYERNQQ 126
Query: 520 WKEAANVLVGIPLETGQKQYSVDYKLETYLKIARLYLEVDDPVQAEAFVNRASLLQAETT 699
W++AA VLVGIPLETGQKQYSV+ KL TYLKIARLYLE +D VQAE F+NRASLLQAET
Sbjct: 127 WRDAATVLVGIPLETGQKQYSVECKLGTYLKIARLYLEDNDSVQAELFINRASLLQAETN 186
Query: 700 NEQLQIYYKVCYARV*IIEGNSSKRLKGTMNCHIVTLSTKTSGMTCLRNALICT 861
+E+LQ+ YKVCYARV + + + + MT L+ ALICT
Sbjct: 187 SEELQVLYKVCYARVLDYRRKFIEAAQRYNELSYRKIVDQGERMTALKKALICT 240
>AF129082-1|AAD28607.1| 407|Drosophila melanogaster COP9
signalosome subunit 4 CSN4 protein.
Length = 407
Score = 262 bits (643), Expect = 3e-70
Identities = 134/234 (57%), Positives = 169/234 (72%)
Frame = +1
Query: 160 VNLQSVRQYLSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSL 339
++ ++R L N G HKDQA+KYR +L +L +T QEL + L+ F+EAIVNE+VSL
Sbjct: 7 ISTAALRSQQMGLINFTGTHKDQADKYRQLLKTVLTNTGQELIDGLRLFVEAIVNEHVSL 66
Query: 340 VISRQLLTDVSTHLALLADNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYERNQN 519
VISRQ+L DV + L+ L D++S+ +SHF L+ + PRVISFEEQVA IR HLA+IYERNQ
Sbjct: 67 VISRQILNDVGSELSKLPDDLSKMLSHFTLEKVNPRVISFEEQVAGIRFHLANIYERNQQ 126
Query: 520 WKEAANVLVGIPLETGQKQYSVDYKLETYLKIARLYLEVDDPVQAEAFVNRASLLQAETT 699
W++AA VLVGIPLETGQKQYSV+ KL TYLKIARLYLE +D VQAE F+NRASLLQAET
Sbjct: 127 WRDAATVLVGIPLETGQKQYSVECKLGTYLKIARLYLEDNDSVQAELFINRASLLQAETN 186
Query: 700 NEQLQIYYKVCYARV*IIEGNSSKRLKGTMNCHIVTLSTKTSGMTCLRNALICT 861
+E+LQ+ YKVCYARV + + + + MT L+ ALICT
Sbjct: 187 SEELQVLYKVCYARVLDYRRKFIEAAQRYNELSYRKIVDQGERMTALKKALICT 240
>BT022088-1|AAY33504.1| 787|Drosophila melanogaster RE03647p
protein.
Length = 787
Score = 30.7 bits (66), Expect = 2.8
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +3
Query: 669 QSLIATGR----NNQRATADILQSLLCKSLDYRRKFIEAAQRYNELSYRNIIHED 821
QSL+A + NN RA D+L + +C L+YR + YNE + D
Sbjct: 445 QSLLALQKLKDDNNARALFDMLLNNVCYVLEYRETVLHLLMNYNEAHSTKVFLRD 499
>BT010028-1|AAQ22497.1| 787|Drosophila melanogaster RE03551p
protein.
Length = 787
Score = 30.7 bits (66), Expect = 2.8
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +3
Query: 669 QSLIATGR----NNQRATADILQSLLCKSLDYRRKFIEAAQRYNELSYRNIIHED 821
QSL+A + NN RA D+L + +C L+YR + YNE + D
Sbjct: 445 QSLLALQKLKDDNNARALFDMLLNNVCYVLEYRETVLHLLMNYNEAHSTKVFLRD 499
>AF279586-1|AAF82381.1| 1384|Drosophila melanogaster TIM2 protein
protein.
Length = 1384
Score = 30.7 bits (66), Expect = 2.8
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +3
Query: 669 QSLIATGR----NNQRATADILQSLLCKSLDYRRKFIEAAQRYNELSYRNIIHED 821
QSL+A + NN RA D+L + +C L+YR + YNE + D
Sbjct: 445 QSLLALQKLKDDNNARALFDMLLNNVCYVLEYRETVLHLLMNYNEAHSTKVFLRD 499
>AF268472-1|AAF73481.1| 1384|Drosophila melanogaster TIMEOUT
protein.
Length = 1384
Score = 30.7 bits (66), Expect = 2.8
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +3
Query: 669 QSLIATGR----NNQRATADILQSLLCKSLDYRRKFIEAAQRYNELSYRNIIHED 821
QSL+A + NN RA D+L + +C L+YR + YNE + D
Sbjct: 445 QSLLALQKLKDDNNARALFDMLLNNVCYVLEYRETVLHLLMNYNEAHSTKVFLRD 499
>AE014297-1632|AAF54908.3| 1384|Drosophila melanogaster CG7855-PA
protein.
Length = 1384
Score = 30.7 bits (66), Expect = 2.8
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +3
Query: 669 QSLIATGR----NNQRATADILQSLLCKSLDYRRKFIEAAQRYNELSYRNIIHED 821
QSL+A + NN RA D+L + +C L+YR + YNE + D
Sbjct: 445 QSLLALQKLKDDNNARALFDMLLNNVCYVLEYRETVLHLLMNYNEAHSTKVFLRD 499
>AY069196-1|AAL39341.1| 397|Drosophila melanogaster GH25458p
protein.
Length = 397
Score = 29.9 bits (64), Expect = 4.9
Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +1
Query: 175 VRQYLSELRNSGG-LHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVI 345
+ Q S + N GG + + ++YRN +M+I + ++E+S+ + ++ +V+LVI
Sbjct: 22 MEQVSSMVSNGGGSVAMQRDDEYRNRIMKIRRLADEEISDKASTCGKLLIFLSVALVI 79
>AE014296-875|AAF47921.3| 397|Drosophila melanogaster CG32245-PA,
isoform A protein.
Length = 397
Score = 29.9 bits (64), Expect = 4.9
Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +1
Query: 175 VRQYLSELRNSGG-LHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVI 345
+ Q S + N GG + + ++YRN +M+I + ++E+S+ + ++ +V+LVI
Sbjct: 22 MEQVSSMVSNGGGSVAMQRDDEYRNRIMKIRRLADEEISDKASTCGKLLIFLSVALVI 79
>AY071292-1|AAL48914.1| 513|Drosophila melanogaster RE32485p
protein.
Length = 513
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 374 HT*HCWLIMFHRRFHTLHLMLYNPELF 454
H H W + HR T+H+ NP+L+
Sbjct: 333 HDLHIWQLAAHRYVATIHIQFQNPKLY 359
>AE014296-3379|AAN12133.1| 513|Drosophila melanogaster CG5130-PB,
isoform B protein.
Length = 513
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 374 HT*HCWLIMFHRRFHTLHLMLYNPELF 454
H H W + HR T+H+ NP+L+
Sbjct: 333 HDLHIWQLAAHRYVATIHIQFQNPKLY 359
>AE014296-3378|AAF51612.1| 513|Drosophila melanogaster CG5130-PA,
isoform A protein.
Length = 513
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 374 HT*HCWLIMFHRRFHTLHLMLYNPELF 454
H H W + HR T+H+ NP+L+
Sbjct: 333 HDLHIWQLAAHRYVATIHIQFQNPKLY 359
>AY118742-1|AAM50602.1| 448|Drosophila melanogaster GH05665p
protein.
Length = 448
Score = 29.1 bits (62), Expect = 8.6
Identities = 31/165 (18%), Positives = 71/165 (43%)
Frame = +1
Query: 166 LQSVRQYLSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVI 345
+ S+++ L+++R+ + Q + V E+ + E L+ + + + + L
Sbjct: 199 VNSLKEELAKMRDERNYFQAQYKFQTQVNSELKSLLVASVGEDLQTRVNLLTEDKLQL-- 256
Query: 346 SRQLLTDVSTHLALLADNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYERNQNWK 525
+R LL D + +L + + E +V + + ++ V + + AD+ ++NQ
Sbjct: 257 ARALL-DTANNLTTHTEQI--EFLAGQCEVWRSKFLASSVMVEELARWKADLTQKNQLLN 313
Query: 526 EAANVLVGIPLETGQKQYSVDYKLETYLKIARLYLEVDDPVQAEA 660
E+ L+ + + Q + +L+ KI L L D + A
Sbjct: 314 ESTKQLLHATHQIREIQLDMLKQLKFLAKIRFLNLPATDVISLSA 358
>AY118636-1|AAM50005.1| 1238|Drosophila melanogaster SD02122p
protein.
Length = 1238
Score = 29.1 bits (62), Expect = 8.6
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +1
Query: 220 KDQAEKYRNVLMEILK-STEQELSESLKAFIEAIVNE-NVSLVISRQLLTDVSTHLALLA 393
K Q E+ + L E++K S +Q ++++ I+ + N S+V +S +
Sbjct: 701 KMQKERLQEELKELVKKSRKQSELATVESQIKGLENRLKYSMVDLESSKKSISQY----- 755
Query: 394 DNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYERNQN 519
DN Q+V LD P+++ E ++ + +H+ +I E N
Sbjct: 756 DNQLQQVQS-QLDEFGPKILEIERRMQNREEHIQEIKENMNN 796
>AJ271845-1|CAB76376.1| 1238|Drosophila melanogaster SMC1 protein
protein.
Length = 1238
Score = 29.1 bits (62), Expect = 8.6
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +1
Query: 220 KDQAEKYRNVLMEILK-STEQELSESLKAFIEAIVNE-NVSLVISRQLLTDVSTHLALLA 393
K Q E+ + L E++K S +Q ++++ I+ + N S+V +S +
Sbjct: 701 KMQKERLQEELKELVKKSRKQSELATVESQIKGLENRLKYSMVDLESSKKSISQY----- 755
Query: 394 DNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYERNQN 519
DN Q+V LD P+++ E ++ + +H+ +I E N
Sbjct: 756 DNQLQQVQS-QLDEFGPKILEIERRMQNREEHIQEIKENMNN 796
>AF225909-1|AAF43149.1| 1238|Drosophila melanogaster cohesin subunit
protein.
Length = 1238
Score = 29.1 bits (62), Expect = 8.6
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +1
Query: 220 KDQAEKYRNVLMEILK-STEQELSESLKAFIEAIVNE-NVSLVISRQLLTDVSTHLALLA 393
K Q E+ + L E++K S +Q ++++ I+ + N S+V +S +
Sbjct: 701 KMQKERLQEELKELVKKSRKQSELATVESQIKGLENRLKYSMVDLESSKKSISQY----- 755
Query: 394 DNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYERNQN 519
DN Q+V LD P+++ E ++ + +H+ +I E N
Sbjct: 756 DNQLQQVQS-QLDEFGPKILEIERRMQNREEHIQEIKENMNN 796
>AE014297-3454|AAF56231.1| 1238|Drosophila melanogaster CG6057-PA
protein.
Length = 1238
Score = 29.1 bits (62), Expect = 8.6
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +1
Query: 220 KDQAEKYRNVLMEILK-STEQELSESLKAFIEAIVNE-NVSLVISRQLLTDVSTHLALLA 393
K Q E+ + L E++K S +Q ++++ I+ + N S+V +S +
Sbjct: 701 KMQKERLQEELKELVKKSRKQSELATVESQIKGLENRLKYSMVDLESSKKSISQY----- 755
Query: 394 DNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYERNQN 519
DN Q+V LD P+++ E ++ + +H+ +I E N
Sbjct: 756 DNQLQQVQS-QLDEFGPKILEIERRMQNREEHIQEIKENMNN 796
>AE014297-928|AAN13423.1| 448|Drosophila melanogaster CG9356-PB,
isoform B protein.
Length = 448
Score = 29.1 bits (62), Expect = 8.6
Identities = 31/165 (18%), Positives = 71/165 (43%)
Frame = +1
Query: 166 LQSVRQYLSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVI 345
+ S+++ L+++R+ + Q + V E+ + E L+ + + + + L
Sbjct: 199 VNSLKEELAKMRDERNYFQAQYKFQTQVNSELKSLLVASVGEDLQTRVNLLTEDKLQL-- 256
Query: 346 SRQLLTDVSTHLALLADNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYERNQNWK 525
+R LL D + +L + + E +V + + ++ V + + AD+ ++NQ
Sbjct: 257 ARALL-DTANNLTTHTEQI--EFLAGQCEVWRSKFLASSVMVEELARWKADLTQKNQLLN 313
Query: 526 EAANVLVGIPLETGQKQYSVDYKLETYLKIARLYLEVDDPVQAEA 660
E+ L+ + + Q + +L+ KI L L D + A
Sbjct: 314 ESTKQLLHATHQIREIQLDMLKQLKFLAKIRFLNLPATDVISLSA 358
>AE014297-927|AAF54371.1| 448|Drosophila melanogaster CG9356-PA,
isoform A protein.
Length = 448
Score = 29.1 bits (62), Expect = 8.6
Identities = 31/165 (18%), Positives = 71/165 (43%)
Frame = +1
Query: 166 LQSVRQYLSELRNSGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVI 345
+ S+++ L+++R+ + Q + V E+ + E L+ + + + + L
Sbjct: 199 VNSLKEELAKMRDERNYFQAQYKFQTQVNSELKSLLVASVGEDLQTRVNLLTEDKLQL-- 256
Query: 346 SRQLLTDVSTHLALLADNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYERNQNWK 525
+R LL D + +L + + E +V + + ++ V + + AD+ ++NQ
Sbjct: 257 ARALL-DTANNLTTHTEQI--EFLAGQCEVWRSKFLASSVMVEELARWKADLTQKNQLLN 313
Query: 526 EAANVLVGIPLETGQKQYSVDYKLETYLKIARLYLEVDDPVQAEA 660
E+ L+ + + Q + +L+ KI L L D + A
Sbjct: 314 ESTKQLLHATHQIREIQLDMLKQLKFLAKIRFLNLPATDVISLSA 358
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,479,972
Number of Sequences: 53049
Number of extensions: 725297
Number of successful extensions: 2086
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2080
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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