Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_P10
(951 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P22392 Cluster: Nucleoside diphosphate kinase B; n=54; ... 52 2e-05
UniRef50_P15532 Cluster: Nucleoside diphosphate kinase A; n=92; ... 52 3e-05
UniRef50_P36010 Cluster: Nucleoside diphosphate kinase; n=88; ce... 50 7e-05
UniRef50_Q13232 Cluster: Nucleoside diphosphate kinase 3; n=9; C... 49 2e-04
UniRef50_O49203 Cluster: Nucleoside diphosphate kinase III, chlo... 49 2e-04
UniRef50_Q5KAX0 Cluster: Nucleoside-diphosphate kinase, putative... 48 5e-04
UniRef50_Q4PA96 Cluster: Putative uncharacterized protein; n=2; ... 47 8e-04
UniRef50_A5X5D1 Cluster: Nucleoside diphosphate kinase; n=2; Eut... 45 0.002
UniRef50_Q8PU77 Cluster: Nucleoside diphosphate kinase; n=23; ce... 43 0.013
UniRef50_Q5V5M1 Cluster: Nucleoside diphosphate kinase; n=19; ce... 43 0.013
UniRef50_O64903 Cluster: Nucleoside diphosphate kinase II, chlor... 43 0.013
UniRef50_P68870 Cluster: Nucleoside diphosphate kinase; n=35; ce... 42 0.023
UniRef50_Q9WV85 Cluster: Nucleoside diphosphate kinase 3; n=15; ... 42 0.023
UniRef50_Q8EQB4 Cluster: Nucleoside diphosphate kinase; n=18; ce... 41 0.053
UniRef50_Q8R4B4 Cluster: Down syndrome cell adhesion molecule-li... 40 0.12
UniRef50_Q7NMQ5 Cluster: Nucleoside diphosphate kinase; n=10; ce... 39 0.16
UniRef50_Q5CM00 Cluster: Nucleoside diphosphate kinase; n=3; cel... 37 0.66
UniRef50_Q8SRM7 Cluster: NUCLEOSIDE DIPHOSPHATASE KINASE A; n=1;... 37 0.66
UniRef50_A7HJ26 Cluster: Nucleoside-diphosphate kinase; n=2; The... 37 0.87
UniRef50_Q9RRJ1 Cluster: Nucleoside diphosphate kinase; n=5; Bac... 37 0.87
UniRef50_O00746 Cluster: Nucleoside diphosphate kinase, mitochon... 37 0.87
UniRef50_Q4RG09 Cluster: Nucleoside diphosphate kinase; n=2; Tet... 35 3.5
UniRef50_Q1MPA2 Cluster: Nucleoside diphosphate kinase; n=2; Bac... 34 4.6
UniRef50_Q9HJ59 Cluster: Nucleoside diphosphate kinase; n=6; cel... 34 6.1
UniRef50_A0LSW0 Cluster: Nucleoside-diphosphate kinase; n=1; Aci... 33 8.1
UniRef50_Q8KAZ6 Cluster: Nucleoside diphosphate kinase; n=13; Ba... 33 8.1
UniRef50_Q9Z7T5 Cluster: Nucleoside diphosphate kinase; n=9; Bac... 33 8.1
>UniRef50_P22392 Cluster: Nucleoside diphosphate kinase B; n=54;
cellular organisms|Rep: Nucleoside diphosphate kinase B
- Homo sapiens (Human)
Length = 152
Score = 52.0 bits (119), Expect = 2e-05
Identities = 32/80 (40%), Positives = 40/80 (50%)
Frame = +2
Query: 296 SKXLLQQXXSXXASRPXFPXSXKXXEXXNLWIPMVWERP*CM*RLAVXLTGATNPTXSXP 475
S+ L+Q RP FP K + + MVWE + + + G TNP S P
Sbjct: 44 SEEHLKQHYIDLKDRPFFPGLVKYMNSGPV-VAMVWEGLNVV-KTGRVMLGETNPADSKP 101
Query: 476 GTIRXXLXIQLGRNIIHXSD 535
GTIR IQ+GRNIIH SD
Sbjct: 102 GTIRGDFCIQVGRNIIHGSD 121
>UniRef50_P15532 Cluster: Nucleoside diphosphate kinase A; n=92;
cellular organisms|Rep: Nucleoside diphosphate kinase A
- Mus musculus (Mouse)
Length = 152
Score = 51.6 bits (118), Expect = 3e-05
Identities = 31/80 (38%), Positives = 41/80 (51%)
Frame = +2
Query: 296 SKXLLQQXXSXXASRPXFPXSXKXXEXXNLWIPMVWERP*CM*RLAVXLTGATNPTXSXP 475
S+ LL++ + RP F K + + MVWE + + + G TNP S P
Sbjct: 44 SEDLLKEHYTDLKDRPFFTGLVKYMHSGPV-VAMVWEGLNVV-KTGRVMLGETNPADSKP 101
Query: 476 GTIRXXLXIQLGRNIIHXSD 535
GTIR IQ+GRNIIH SD
Sbjct: 102 GTIRGDFCIQVGRNIIHGSD 121
>UniRef50_P36010 Cluster: Nucleoside diphosphate kinase; n=88;
cellular organisms|Rep: Nucleoside diphosphate kinase -
Saccharomyces cerevisiae (Baker's yeast)
Length = 153
Score = 50.4 bits (115), Expect = 7e-05
Identities = 29/77 (37%), Positives = 38/77 (49%)
Frame = +2
Query: 305 LLQQXXSXXASRPXFPXSXKXXEXXNLWIPMVWERP*CM*RLAVXLTGATNPTXSXPGTI 484
LL+Q + +P FP + + + VWE + R + GATNP S PGTI
Sbjct: 48 LLEQHYAEHVGKPFFPKMVSFMKSGPI-LATVWEGKDVV-RQGRTILGATNPLGSAPGTI 105
Query: 485 RXXLXIQLGRNIIHXSD 535
R I LGRN+ H SD
Sbjct: 106 RGDFGIDLGRNVCHGSD 122
>UniRef50_Q13232 Cluster: Nucleoside diphosphate kinase 3; n=9;
Coelomata|Rep: Nucleoside diphosphate kinase 3 - Homo
sapiens (Human)
Length = 169
Score = 49.2 bits (112), Expect = 2e-04
Identities = 28/85 (32%), Positives = 45/85 (52%)
Frame = +2
Query: 281 RIAPLSKXLLQQXXSXXASRPXFPXSXKXXEXXNLWIPMVWERP*CM*RLAVXLTGATNP 460
++ S+ LL++ + RP + K + + MVW+ + R + L GATNP
Sbjct: 56 KLVQASEELLREHYAELRERPFYGRLVKYMASGPV-VAMVWQGLDVV-RTSRALIGATNP 113
Query: 461 TXSXPGTIRXXLXIQLGRNIIHXSD 535
+ PGTIR I++G+N+IH SD
Sbjct: 114 ADAPPGTIRGDFCIEVGKNLIHGSD 138
>UniRef50_O49203 Cluster: Nucleoside diphosphate kinase III,
chloroplast/mitochondrial precursor; n=32; cellular
organisms|Rep: Nucleoside diphosphate kinase III,
chloroplast/mitochondrial precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 238
Score = 48.8 bits (111), Expect = 2e-04
Identities = 32/80 (40%), Positives = 38/80 (47%)
Frame = +2
Query: 296 SKXLLQQXXSXXASRPXFPXSXKXXEXXNLWIPMVWERP*CM*RLAVXLTGATNPTXSXP 475
SK Q+ RP F + I MVWE + R L GAT+P S P
Sbjct: 128 SKDFAQKHYHDLKERPFFNGLCDFLSSGPV-IAMVWEGDGVI-RYGRKLIGATDPQKSEP 185
Query: 476 GTIRXXLXIQLGRNIIHXSD 535
GTIR L + +GRNIIH SD
Sbjct: 186 GTIRGDLAVTVGRNIIHGSD 205
>UniRef50_Q5KAX0 Cluster: Nucleoside-diphosphate kinase, putative;
n=1; Filobasidiella neoformans|Rep:
Nucleoside-diphosphate kinase, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 287
Score = 47.6 bits (108), Expect = 5e-04
Identities = 25/80 (31%), Positives = 40/80 (50%)
Frame = +2
Query: 296 SKXLLQQXXSXXASRPXFPXSXKXXEXXNLWIPMVWERP*CM*RLAVXLTGATNPTXSXP 475
S L ++ + ++RP +P K + MVWE + R + GATNP +
Sbjct: 176 SDALAKEHYADLSARPFYPSLVKYITSGTPVVAMVWEGKDVI-RQGRRIVGATNPLDADA 234
Query: 476 GTIRXXLXIQLGRNIIHXSD 535
G++R + +GRN+IH SD
Sbjct: 235 GSVRGQYAVSVGRNLIHASD 254
>UniRef50_Q4PA96 Cluster: Putative uncharacterized protein; n=2;
Basidiomycota|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 223
Score = 46.8 bits (106), Expect = 8e-04
Identities = 27/80 (33%), Positives = 38/80 (47%)
Frame = +2
Query: 296 SKXLLQQXXSXXASRPXFPXSXKXXEXXNLWIPMVWERP*CM*RLAVXLTGATNPTXSXP 475
S L ++ A +P + K + MVW+ + R L GATNP + P
Sbjct: 111 SAELAKEHYIDLAKKPFYGGLVKYITSGTPVVAMVWQGKDVI-RQGRRLVGATNPLDAAP 169
Query: 476 GTIRXXLXIQLGRNIIHXSD 535
G+IR + +GRNIIH SD
Sbjct: 170 GSIRGDFCVSVGRNIIHASD 189
>UniRef50_A5X5D1 Cluster: Nucleoside diphosphate kinase; n=2;
Eutheria|Rep: Nucleoside diphosphate kinase - Sus scrofa
(Pig)
Length = 75
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = +2
Query: 440 LTGATNPTXSXPGTIRXXLXIQLGRNIIHXSD 535
+ G TNP S PGTIR IQ+GRNIIH SD
Sbjct: 13 MLGETNPADSKPGTIRGDFCIQVGRNIIHGSD 44
>UniRef50_Q8PU77 Cluster: Nucleoside diphosphate kinase; n=23;
cellular organisms|Rep: Nucleoside diphosphate kinase -
Methanosarcina mazei (Methanosarcina frisia)
Length = 149
Score = 42.7 bits (96), Expect = 0.013
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 440 LTGATNPTXSXPGTIRXXLXIQLGRNIIHXSD 535
+ GATNP + PGTIR + +GRN++H SD
Sbjct: 87 INGATNPVDAAPGTIRGDFALDVGRNVVHASD 118
>UniRef50_Q5V5M1 Cluster: Nucleoside diphosphate kinase; n=19;
cellular organisms|Rep: Nucleoside diphosphate kinase -
Haloarcula marismortui (Halobacterium marismortui)
Length = 154
Score = 42.7 bits (96), Expect = 0.013
Identities = 22/47 (46%), Positives = 26/47 (55%)
Frame = +2
Query: 395 MVWERP*CM*RLAVXLTGATNPTXSXPGTIRXXLXIQLGRNIIHXSD 535
MVWE R + G T+P S PGTIR + LGRN+IH SD
Sbjct: 76 MVWEGQDAT-RQVRTMMGETDPAESAPGTIRGDYGLDLGRNVIHGSD 121
>UniRef50_O64903 Cluster: Nucleoside diphosphate kinase II,
chloroplast precursor; n=24; cellular organisms|Rep:
Nucleoside diphosphate kinase II, chloroplast precursor
- Arabidopsis thaliana (Mouse-ear cress)
Length = 231
Score = 42.7 bits (96), Expect = 0.013
Identities = 26/79 (32%), Positives = 39/79 (49%)
Frame = +2
Query: 299 KXLLQQXXSXXASRPXFPXSXKXXEXXNLWIPMVWERP*CM*RLAVXLTGATNPTXSXPG 478
K L ++ +++ FP + + + M WE + A L G T+P + PG
Sbjct: 124 KELAEEHYKDLSAKSFFPNLIEYITSGPV-VCMAWEGVGVV-ASARKLIGKTDPLQAEPG 181
Query: 479 TIRXXLXIQLGRNIIHXSD 535
TIR L +Q GRNI+H SD
Sbjct: 182 TIRGDLAVQTGRNIVHGSD 200
>UniRef50_P68870 Cluster: Nucleoside diphosphate kinase; n=35;
cellular organisms|Rep: Nucleoside diphosphate kinase -
Staphylococcus aureus
Length = 149
Score = 41.9 bits (94), Expect = 0.023
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +2
Query: 440 LTGATNPTXSXPGTIRXXLXIQLGRNIIHXSD 535
+ G+TNP+ + PG+IR L + +GRNIIH SD
Sbjct: 87 IIGSTNPSEASPGSIRGDLGLTVGRNIIHGSD 118
>UniRef50_Q9WV85 Cluster: Nucleoside diphosphate kinase 3; n=15;
cellular organisms|Rep: Nucleoside diphosphate kinase 3
- Mus musculus (Mouse)
Length = 169
Score = 41.9 bits (94), Expect = 0.023
Identities = 24/85 (28%), Positives = 43/85 (50%)
Frame = +2
Query: 281 RIAPLSKXLLQQXXSXXASRPXFPXSXKXXEXXNLWIPMVWERP*CM*RLAVXLTGATNP 460
++ S+ LL++ +P + K + + MVW+ + + L GAT+P
Sbjct: 56 KLVQASEELLREHYVELREKPFYSRLVKYMSSGPV-VAMVWQGLDVV-HASRALIGATDP 113
Query: 461 TXSXPGTIRXXLXIQLGRNIIHXSD 535
+ PGTIR +++G+N+IH SD
Sbjct: 114 GDAMPGTIRGDFCMEVGKNVIHGSD 138
>UniRef50_Q8EQB4 Cluster: Nucleoside diphosphate kinase; n=18;
cellular organisms|Rep: Nucleoside diphosphate kinase -
Oceanobacillus iheyensis
Length = 148
Score = 40.7 bits (91), Expect = 0.053
Identities = 27/85 (31%), Positives = 38/85 (44%)
Frame = +2
Query: 281 RIAPLSKXLLQQXXSXXASRPXFPXSXKXXEXXNLWIPMVWERP*CM*RLAVXLTGATNP 460
++ +S L + S RP F ++ MVWE + A + G TNP
Sbjct: 36 KLMQVSNQLAETHYSEHKERPFFGELVDFITSGPVFA-MVWEGENVI-ATARKMMGKTNP 93
Query: 461 TXSXPGTIRXXLXIQLGRNIIHXSD 535
+ P TIR I +G+NIIH SD
Sbjct: 94 LEADPSTIRGDFGISVGKNIIHGSD 118
>UniRef50_Q8R4B4 Cluster: Down syndrome cell adhesion molecule-like
protein; n=1; Mus musculus|Rep: Down syndrome cell
adhesion molecule-like protein - Mus musculus (Mouse)
Length = 365
Score = 39.5 bits (88), Expect = 0.12
Identities = 26/73 (35%), Positives = 34/73 (46%)
Frame = +2
Query: 296 SKXLLQQXXSXXASRPXFPXSXKXXEXXNLWIPMVWERP*CM*RLAVXLTGATNPTXSXP 475
S+ L+Q RP FP K + + MVWE + + + G TNP S P
Sbjct: 44 SEEHLKQHYIDLKDRPFFPGLVKYMNSGPV-VAMVWEGLNVV-KTGRVMLGETNPADSKP 101
Query: 476 GTIRXXLXIQLGR 514
GTIR IQ+GR
Sbjct: 102 GTIRGDFCIQVGR 114
>UniRef50_Q7NMQ5 Cluster: Nucleoside diphosphate kinase; n=10;
cellular organisms|Rep: Nucleoside diphosphate kinase -
Gloeobacter violaceus
Length = 149
Score = 39.1 bits (87), Expect = 0.16
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = +2
Query: 440 LTGATNPTXSXPGTIRXXLXIQLGRNIIHXSD 535
+ G TNP S GTIR I +GRNIIH SD
Sbjct: 87 MMGVTNPLNSPLGTIRGDYGIDIGRNIIHGSD 118
>UniRef50_Q5CM00 Cluster: Nucleoside diphosphate kinase; n=3;
cellular organisms|Rep: Nucleoside diphosphate kinase -
Cryptosporidium hominis
Length = 150
Score = 37.1 bits (82), Expect = 0.66
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 440 LTGATNPTXSXPGTIRXXLXIQLGRNIIHXSD 535
+ G+T P + PGTIR Q GRN+IH SD
Sbjct: 88 MMGSTRPGEAAPGTIRADFCQQAGRNLIHGSD 119
>UniRef50_Q8SRM7 Cluster: NUCLEOSIDE DIPHOSPHATASE KINASE A; n=1;
Encephalitozoon cuniculi|Rep: NUCLEOSIDE DIPHOSPHATASE
KINASE A - Encephalitozoon cuniculi
Length = 147
Score = 37.1 bits (82), Expect = 0.66
Identities = 24/79 (30%), Positives = 36/79 (45%)
Frame = +2
Query: 299 KXLLQQXXSXXASRPXFPXSXKXXEXXNLWIPMVWERP*CM*RLAVXLTGATNPTXSXPG 478
+ +L+ S +S P F + + + MVW + + L G TNP + G
Sbjct: 42 REVLETHYSHLSSMPFFSEMVEDM-MSGMVLAMVWVGKDAV-SIGRKLIGETNPQAASVG 99
Query: 479 TIRXXLXIQLGRNIIHXSD 535
TIR + G+NIIH SD
Sbjct: 100 TIRGDYGVSTGKNIIHGSD 118
>UniRef50_A7HJ26 Cluster: Nucleoside-diphosphate kinase; n=2;
Thermotogaceae|Rep: Nucleoside-diphosphate kinase -
Fervidobacterium nodosum Rt17-B1
Length = 147
Score = 36.7 bits (81), Expect = 0.87
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 389 IPMVWERP*CM*RLAVXLTGATNPTXSXPGTIRXXLXIQLGRNIIHXSDXT 541
+ ++ E P C+ L + GAT+P + G+IR + + +N+IH SD T
Sbjct: 71 VAVILEAPRCL-ELVRHIVGATDPLKAEAGSIRGEFALTVTKNLIHASDST 120
>UniRef50_Q9RRJ1 Cluster: Nucleoside diphosphate kinase; n=5;
Bacteria|Rep: Nucleoside diphosphate kinase -
Deinococcus radiodurans
Length = 138
Score = 36.7 bits (81), Expect = 0.87
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 440 LTGATNPTXSXPGTIRXXLXIQLGRNIIHXSD 535
+ GATNP + PGTIR G N+ H SD
Sbjct: 87 MMGATNPANAAPGTIRADFATSTGENVTHGSD 118
>UniRef50_O00746 Cluster: Nucleoside diphosphate kinase,
mitochondrial precursor; n=16; Coelomata|Rep: Nucleoside
diphosphate kinase, mitochondrial precursor - Homo
sapiens (Human)
Length = 187
Score = 36.7 bits (81), Expect = 0.87
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 389 IPMVWERP*CM*RLAVXLTGATNPTXSXPGTIRXXLXIQLGRNIIHXSD 535
+ MVWE + R + + G T+ + PGTIR + + RN+IH SD
Sbjct: 107 VAMVWEGYNVV-RASRAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASD 154
>UniRef50_Q4RG09 Cluster: Nucleoside diphosphate kinase; n=2;
Tetraodontidae|Rep: Nucleoside diphosphate kinase -
Tetraodon nigroviridis (Green puffer)
Length = 189
Score = 34.7 bits (76), Expect = 3.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 440 LTGATNPTXSXPGTIRXXLXIQLGRNIIHXSD 535
+ G TNP + GT+R + + RN++H SD
Sbjct: 137 MVGQTNPAEAQAGTVRGDFSLHVSRNVVHASD 168
>UniRef50_Q1MPA2 Cluster: Nucleoside diphosphate kinase; n=2;
Bacteria|Rep: Nucleoside diphosphate kinase - Lawsonia
intracellularis (strain PHE/MN1-00)
Length = 138
Score = 34.3 bits (75), Expect = 4.6
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +2
Query: 440 LTGATNPTXSXPGTIRXXLXIQLGRNIIHXSD 535
L GATNP + GTIR I L N +H SD
Sbjct: 87 LMGATNPQNAQEGTIRKSFAISLMENAVHGSD 118
>UniRef50_Q9HJ59 Cluster: Nucleoside diphosphate kinase; n=6;
cellular organisms|Rep: Nucleoside diphosphate kinase -
Thermoplasma acidophilum
Length = 148
Score = 33.9 bits (74), Expect = 6.1
Identities = 23/81 (28%), Positives = 38/81 (46%)
Frame = +2
Query: 293 LSKXLLQQXXSXXASRPXFPXSXKXXEXXNLWIPMVWERP*CM*RLAVXLTGATNPTXSX 472
++K + S S+P F + + MV E P + + L G+T+ + +
Sbjct: 41 MTKDQAENHYSVHRSKPFFKDLVTYITSGPI-VAMVLEGPKAI-EVVRILAGSTDGSKAQ 98
Query: 473 PGTIRXXLXIQLGRNIIHXSD 535
PGTIR + + +NIIH SD
Sbjct: 99 PGTIRGDFSMGIEKNIIHASD 119
>UniRef50_A0LSW0 Cluster: Nucleoside-diphosphate kinase; n=1;
Acidothermus cellulolyticus 11B|Rep:
Nucleoside-diphosphate kinase - Acidothermus
cellulolyticus (strain ATCC 43068 / 11B)
Length = 141
Score = 33.5 bits (73), Expect = 8.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 440 LTGATNPTXSXPGTIRXXLXIQLGRNIIHXSD 535
L G+T+P + PGTIR + + N++H SD
Sbjct: 90 LMGSTDPVAAPPGTIRGDFGLLVTENLVHGSD 121
>UniRef50_Q8KAZ6 Cluster: Nucleoside diphosphate kinase; n=13;
Bacteria|Rep: Nucleoside diphosphate kinase - Chlorobium
tepidum
Length = 140
Score = 33.5 bits (73), Expect = 8.1
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +2
Query: 389 IPMVWERP*CM*RLAVXLTGATNPTXSXPGTIRXXLXIQLGRNIIHXSD 535
+PM+ E+ + L GAT+P + GTIR G NIIH SD
Sbjct: 71 VPMILEKENAVADFRT-LIGATDPAQADEGTIRKLYADSKGENIIHGSD 118
>UniRef50_Q9Z7T5 Cluster: Nucleoside diphosphate kinase; n=9;
Bacteria|Rep: Nucleoside diphosphate kinase - Chlamydia
pneumoniae (Chlamydophila pneumoniae)
Length = 144
Score = 33.5 bits (73), Expect = 8.1
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 440 LTGATNPTXSXPGTIRXXLXIQLGRNIIHXSD 535
L GATNP + GTIR +G N +H SD
Sbjct: 87 LMGATNPAEAASGTIRAKFGESIGVNAVHGSD 118
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 392,938,872
Number of Sequences: 1657284
Number of extensions: 3837142
Number of successful extensions: 2868
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2867
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 87774035305
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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