Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_P10
         (951 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215...    50   4e-06
05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416...    46   3e-05
10_08_0945 - 21738643-21738760,21740056-21740287,21740582-217406...    46   4e-05
07_03_0445 - 18281715-18281832,18282274-18282505,18283486-182835...    45   1e-04

>12_02_0695 +
           22220054-22220056,22221226-22221276,22221415-22221501,
           22222064-22222144,22222241-22222353,22222482-22222531,
           22222790-22222857
          Length = 150

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 29/79 (36%), Positives = 39/79 (49%)
 Frame = +2

Query: 299 KXLLQQXXSXXASRPXFPXSXKXXEXXNLWIPMVWERP*CM*RLAVXLTGATNPTXSXPG 478
           K L Q+       +P FP   +      + + M WE    +   A  L GATNP  + PG
Sbjct: 43  KDLAQEHYKDLKEKPFFPGLIEYITSGPV-VCMAWEGNGVV-ASARKLIGATNPLQAEPG 100

Query: 479 TIRXXLXIQLGRNIIHXSD 535
           TIR  L +Q GRN++H SD
Sbjct: 101 TIRGDLAVQTGRNVVHGSD 119


>05_07_0347 -
           29440541-29440664,29440908-29441020,29441522-29441689,
           29442341-29442391,29442518-29442555,29442885-29442978
          Length = 195

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 30/80 (37%), Positives = 38/80 (47%)
 Frame = +2

Query: 296 SKXLLQQXXSXXASRPXFPXSXKXXEXXNLWIPMVWERP*CM*RLAVXLTGATNPTXSXP 475
           SK   Q+       RP F           + + MVWE    + +    L GAT+P  S P
Sbjct: 85  SKEFAQKHYHDLKDRPFFNGLCDFLSSGPV-LAMVWEGEGVI-KYGRKLIGATDPQKSEP 142

Query: 476 GTIRXXLXIQLGRNIIHXSD 535
           GTIR  L + +GRNIIH SD
Sbjct: 143 GTIRGDLAVVVGRNIIHGSD 162


>10_08_0945 -
           21738643-21738760,21740056-21740287,21740582-21740630,
           21740720-21740776
          Length = 151

 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 26/85 (30%), Positives = 42/85 (49%)
 Frame = +2

Query: 281 RIAPLSKXLLQQXXSXXASRPXFPXSXKXXEXXNLWIPMVWERP*CM*RLAVXLTGATNP 460
           ++  + K   ++  +  +S+P F    +      + + MVWE    +      L GATNP
Sbjct: 38  KLINVEKSFAEKHYADLSSKPFFGGLVEYIVSGPV-VAMVWEGKQVV-STGRKLVGATNP 95

Query: 461 TXSXPGTIRXXLXIQLGRNIIHXSD 535
             + PGTIR    + +GRN+IH SD
Sbjct: 96  LAAEPGTIRGDFAVDIGRNVIHGSD 120


>07_03_0445 -
           18281715-18281832,18282274-18282505,18283486-18283534,
           18283733-18283783
          Length = 149

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 25/81 (30%), Positives = 40/81 (49%)
 Frame = +2

Query: 293 LSKXLLQQXXSXXASRPXFPXSXKXXEXXNLWIPMVWERP*CM*RLAVXLTGATNPTXSX 472
           + +   QQ  +  + +P FP   +      + + MVWE    +      + GAT P  + 
Sbjct: 40  VERSFAQQHYADLSDKPFFPGLVEYIISGPV-VAMVWEGKDVV-ATGRRIIGATRPWEAA 97

Query: 473 PGTIRXXLXIQLGRNIIHXSD 535
           PGTIR    +++GRN+IH SD
Sbjct: 98  PGTIRADYAVEVGRNVIHGSD 118


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,016,962
Number of Sequences: 37544
Number of extensions: 110249
Number of successful extensions: 89
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 89
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2741249160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)