Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_P10
         (951 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13107-1|CAA31500.1|  153|Drosophila melanogaster protein ( Dros...    61   3e-09
AY113576-1|AAM29581.1|  153|Drosophila melanogaster RH27794p pro...    61   3e-09
AE014297-4796|AAF57188.3|  172|Drosophila melanogaster CG2210-PA...    61   3e-09

>X13107-1|CAA31500.1|  153|Drosophila melanogaster protein (
           Drosophila melanogasterawd mRNA ( abnormal wing disc ).
           ).
          Length = 153

 Score = 60.9 bits (141), Expect = 3e-09
 Identities = 34/80 (42%), Positives = 45/80 (56%)
 Frame = +2

Query: 296 SKXLLQQXXSXXASRPXFPXSXKXXEXXNLWIPMVWERP*CM*RLAVXLTGATNPTXSXP 475
           SK LL++  +  ++RP FP          + +PMVWE    + +    + GATNP  S P
Sbjct: 45  SKELLEKHYADLSARPFFPGLVNYMNSGPV-VPMVWEGLNVV-KTGRQMLGATNPADSLP 102

Query: 476 GTIRXXLXIQLGRNIIHXSD 535
           GTIR    IQ+GRNIIH SD
Sbjct: 103 GTIRGDFCIQVGRNIIHGSD 122



 Score = 33.9 bits (74), Expect = 0.33
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 540 LESAXKXIXLWFTDTXXVGWTPANENXXY 626
           +ESA K I LWF +   V WTPA ++  Y
Sbjct: 124 VESAEKEIALWFNEKELVTWTPAAKDWIY 152


>AY113576-1|AAM29581.1|  153|Drosophila melanogaster RH27794p
           protein.
          Length = 153

 Score = 60.9 bits (141), Expect = 3e-09
 Identities = 34/80 (42%), Positives = 45/80 (56%)
 Frame = +2

Query: 296 SKXLLQQXXSXXASRPXFPXSXKXXEXXNLWIPMVWERP*CM*RLAVXLTGATNPTXSXP 475
           SK LL++  +  ++RP FP          + +PMVWE    + +    + GATNP  S P
Sbjct: 45  SKELLEKHYADLSARPFFPGLVNYMNSGPV-VPMVWEGLNVV-KTGRQMLGATNPADSLP 102

Query: 476 GTIRXXLXIQLGRNIIHXSD 535
           GTIR    IQ+GRNIIH SD
Sbjct: 103 GTIRGDFCIQVGRNIIHGSD 122



 Score = 33.9 bits (74), Expect = 0.33
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 540 LESAXKXIXLWFTDTXXVGWTPANENXXY 626
           +ESA K I LWF +   V WTPA ++  Y
Sbjct: 124 VESAEKEIALWFNEKELVTWTPAAKDWIY 152


>AE014297-4796|AAF57188.3|  172|Drosophila melanogaster CG2210-PA
           protein.
          Length = 172

 Score = 60.9 bits (141), Expect = 3e-09
 Identities = 34/80 (42%), Positives = 45/80 (56%)
 Frame = +2

Query: 296 SKXLLQQXXSXXASRPXFPXSXKXXEXXNLWIPMVWERP*CM*RLAVXLTGATNPTXSXP 475
           SK LL++  +  ++RP FP          + +PMVWE    + +    + GATNP  S P
Sbjct: 64  SKELLEKHYADLSARPFFPGLVNYMNSGPV-VPMVWEGLNVV-KTGRQMLGATNPADSLP 121

Query: 476 GTIRXXLXIQLGRNIIHXSD 535
           GTIR    IQ+GRNIIH SD
Sbjct: 122 GTIRGDFCIQVGRNIIHGSD 141



 Score = 33.9 bits (74), Expect = 0.33
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 540 LESAXKXIXLWFTDTXXVGWTPANENXXY 626
           +ESA K I LWF +   V WTPA ++  Y
Sbjct: 143 VESAEKEIALWFNEKELVTWTPAAKDWIY 171


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,622,872
Number of Sequences: 53049
Number of extensions: 174337
Number of successful extensions: 119
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 116
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4730695893
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)