Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_P09
         (889 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   5.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   5.6  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    22   7.4  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   7.4  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   7.4  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   7.4  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -2

Query: 90  TRVRPFRVAARRGXQNLK 37
           T++RP R ++RR  +NLK
Sbjct: 251 TKMRPKRQSSRRHRKNLK 268


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = -1

Query: 223 TLNIIIVQNTITVHSDIILEQSSSKVNTTKIDGMRN*YLTLCCVY 89
           T+N +++   + V   IIL  + +K  TT I  ++N  + +  +Y
Sbjct: 222 TINFVVLLGDLYVTLYIILTNNQAKYCTTLIGLIKNCVIVIFELY 266


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 655 HNTKKEARIHKTRKRRFKYA 714
           H T ++A  HK RKRR  ++
Sbjct: 29  HLTDQQASGHKKRKRRVLFS 48


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 665 FVLCDVSHRL*LHILSR 615
           FV CD SH+  L+I  R
Sbjct: 297 FVFCDCSHQASLNIARR 313


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 665 FVLCDVSHRL*LHILSR 615
           FV CD SH+  L+I  R
Sbjct: 297 FVFCDCSHQASLNIARR 313


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 665 FVLCDVSHRL*LHILSR 615
           FV CD SH+  L+I  R
Sbjct: 297 FVFCDCSHQASLNIARR 313


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,137
Number of Sequences: 336
Number of extensions: 3486
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24617054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)