Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_P09
         (889 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    26   1.3  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   9.4  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   9.4  

>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 58  SRRHTKRSYTRKHSIELNINFAFHQF 135
           S + T++SY+R  +IEL   F F+++
Sbjct: 5   SSKRTRQSYSRHQTIELEKEFHFNRY 30


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 720 MCPTVSLNCIVRSKMXRDCTLY 785
           MC     NCIVRS +   C ++
Sbjct: 886 MCIKAVYNCIVRSVLEYSCVVW 907


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = -1

Query: 694 FAFYVFSLLFSYYVMFLTDFNCIFFPGVYVFG 599
           F  +V SLL  + ++   D+N + + G+  +G
Sbjct: 651 FDSFVQSLLTVFQILTGEDWNMVMYDGIQAYG 682


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 789,412
Number of Sequences: 2352
Number of extensions: 13945
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)