Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_P09
         (889 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    44   1e-06
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    33   0.005
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    22   6.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   8.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   8.6  

>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 44.4 bits (100), Expect = 1e-06
 Identities = 21/51 (41%), Positives = 30/51 (58%)
 Frame = +2

Query: 725 PHGFVKLYCTFQDEXRLYFVLSYAKNGELLSYINKVGSFELNVAKHYAAEL 877
           P   V+L+  FQ   RLYFV+ Y   G+L+  I + G F+  VA  YA+E+
Sbjct: 44  PPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQCGKFKEPVAVFYASEI 94


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 32.7 bits (71), Expect = 0.005
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +2

Query: 737 VKLYCTFQDEXRLYFVLSYAKNGELLSYINKVGSFELNVAKHYAA 871
           VKL+ TF+D   LY ++     GEL + +   G F+    + Y A
Sbjct: 429 VKLFKTFKDRKYLYMLMEACLGGELWTVLRDKGHFDDGTTRFYTA 473


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 698 DALNMLFNVPHGFVKLYCT 754
           DA  + F VPH F+K  C+
Sbjct: 86  DADILTFVVPHQFIKRICS 104


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -2

Query: 819 YERSSPFFA*DNTKYNLXSSWNVQYNLTKPW 727
           YER +   A D  K  L +++NV+ + + P+
Sbjct: 446 YERDTCLLASDALKQILSAAYNVELHNSSPF 476


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -2

Query: 819 YERSSPFFA*DNTKYNLXSSWNVQYNLTKPW 727
           YER +   A D  K  L +++NV+ + + P+
Sbjct: 484 YERDTCLLASDALKQILSAAYNVELHNSSPF 514


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,748
Number of Sequences: 438
Number of extensions: 3886
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)